RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 ZFYP08048 801 aaPredicted RBP17.76■□□□□ 0.43
CDK5RAP3-236ENST00000584991 POLD1P28340 1107 aa17.76■□□□□ 0.43
CDK5RAP3-236ENST00000584991 PRPF40BQ6NWY9 871 aaKnown RBP17.76■□□□□ 0.43
CDK5RAP3-236ENST00000584991 CCDC129Q6ZRS4 1044 aa17.76■□□□□ 0.43
CDK5RAP3-236ENST00000584991 C15orf52Q6ZUT6 534 aaKnown RBP17.76■□□□□ 0.43
CDK5RAP3-236ENST00000584991 TMX4Q9H1E5 349 aaPredicted RBP17.76■□□□□ 0.43
CDK5RAP3-236ENST00000584991 RBSNQ9H1K0 784 aa17.76■□□□□ 0.43
CDK5RAP3-236ENST00000584991 TMEM63CQ9P1W3 806 aa17.76■□□□□ 0.43
CDK5RAP3-236ENST00000584991 ZSCAN25Q6NSZ9 544 aa17.75■□□□□ 0.43
CDK5RAP3-236ENST00000584991 MPNDQ8N594 471 aa17.75■□□□□ 0.43
CDK5RAP3-236ENST00000584991 KIF13BQ9NQT8 1826 aa17.75■□□□□ 0.43
CDK5RAP3-236ENST00000584991 CCDC171Q6TFL3 1326 aa17.75■□□□□ 0.43
CDK5RAP3-236ENST00000584991 DLEC1Q9Y238 1755 aa17.75■□□□□ 0.43
CDK5RAP3-236ENST00000584991 SEMA3EO15041 775 aa17.75■□□□□ 0.43
CDK5RAP3-236ENST00000584991 MSNP26038 577 aaKnown RBP17.75■□□□□ 0.43
CDK5RAP3-236ENST00000584991 TERF1P54274 439 aa17.75■□□□□ 0.43
CDK5RAP3-236ENST00000584991 WASHC4Q2M389 1173 aa17.75■□□□□ 0.43
CDK5RAP3-236ENST00000584991 SLC9C2Q5TAH2 1124 aa17.75■□□□□ 0.43
CDK5RAP3-236ENST00000584991 VPS53Q5VIR6 699 aa17.75■□□□□ 0.43
CDK5RAP3-236ENST00000584991 FAM184AQ8NB25 1140 aa17.75■□□□□ 0.43
CDK5RAP3-236ENST00000584991 SH2B1Q9NRF2 756 aaPredicted RBP17.75■□□□□ 0.43
CDK5RAP3-236ENST00000584991 WWC3Q9ULE0 1092 aa17.75■□□□□ 0.43
CDK5RAP3-236ENST00000584991 ADD2P35612 726 aa17.74■□□□□ 0.43
CDK5RAP3-236ENST00000584991 CSPP1Q1MSJ5 1256 aa17.74■□□□□ 0.43
CDK5RAP3-236ENST00000584991 DPP8Q6V1X1 898 aaPredicted RBP17.74■□□□□ 0.43
CDK5RAP3-236ENST00000584991 ZNF804AQ7Z570 1209 aa17.74■□□□□ 0.43
CDK5RAP3-236ENST00000584991 OSBP2Q969R2 916 aa17.74■□□□□ 0.43
CDK5RAP3-236ENST00000584991 UPF3BQ9BZI7 483 aaKnown RBP17.74■□□□□ 0.43
CDK5RAP3-236ENST00000584991 ZNF219Q9P2Y4 722 aaPredicted RBP17.74■□□□□ 0.43
CDK5RAP3-236ENST00000584991 MAP3K12Q12852 859 aa17.73■□□□□ 0.43
CDK5RAP3-236ENST00000584991 APPBP2Q92624 585 aa17.73■□□□□ 0.43
CDK5RAP3-236ENST00000584991 LRP2BPQ9P2M1 347 aa17.73■□□□□ 0.43
CDK5RAP3-236ENST00000584991 ABCF2Q9UG63 623 aa17.73■□□□□ 0.43
CDK5RAP3-236ENST00000584991 NOL7Q9UMY1 257 aaKnown RBP17.73■□□□□ 0.43
CDK5RAP3-236ENST00000584991 MAST3O60307 1309 aa17.73■□□□□ 0.43
CDK5RAP3-236ENST00000584991 DUOX1Q9NRD9 1551 aa17.73■□□□□ 0.43
CDK5RAP3-236ENST00000584991 A0A0G2JLW4 131 aa17.73■□□□□ 0.43
CDK5RAP3-236ENST00000584991 M0R2C6 588 aa17.73■□□□□ 0.43
CDK5RAP3-236ENST00000584991 DPEP1P16444 411 aa17.73■□□□□ 0.43
CDK5RAP3-236ENST00000584991 PDE6AP16499 860 aa17.73■□□□□ 0.43
CDK5RAP3-236ENST00000584991 CHAF1AQ13111 956 aaPredicted RBP17.73■□□□□ 0.43
CDK5RAP3-236ENST00000584991 UVSSAQ2YD98 709 aa17.73■□□□□ 0.43
CDK5RAP3-236ENST00000584991 NAP1L5Q96NT1 182 aaPredicted RBP17.73■□□□□ 0.43
CDK5RAP3-236ENST00000584991 ZNF532Q9HCE3 1301 aa17.73■□□□□ 0.43
CDK5RAP3-236ENST00000584991 UBE3CQ15386 1083 aa17.72■□□□□ 0.43
CDK5RAP3-236ENST00000584991 MAGEB6Q8N7X4 407 aa17.72■□□□□ 0.43
CDK5RAP3-236ENST00000584991 TDRD7Q8NHU6 1098 aaKnown RBP17.72■□□□□ 0.43
CDK5RAP3-236ENST00000584991 MAP4K1Q92918 833 aa17.72■□□□□ 0.43
CDK5RAP3-236ENST00000584991 PUS7LQ9H0K6 701 aaKnown RBP17.72■□□□□ 0.43
CDK5RAP3-236ENST00000584991 PDS5AQ29RF7 1337 aaKnown RBP17.72■□□□□ 0.43
CDK5RAP3-236ENST00000584991 SYCE3A1L190 88 aa17.71■□□□□ 0.43
CDK5RAP3-236ENST00000584991 RIMBP2O15034 1052 aa17.71■□□□□ 0.43
CDK5RAP3-236ENST00000584991 ZSCAN22P10073 491 aaPredicted RBP17.71■□□□□ 0.43
CDK5RAP3-236ENST00000584991 ZSWIM6Q9HCJ5 1215 aa17.71■□□□□ 0.43
CDK5RAP3-236ENST00000584991 CD209Q9NNX6 404 aa17.71■□□□□ 0.43
CDK5RAP3-236ENST00000584991 JAG2Q9Y219 1238 aa17.71■□□□□ 0.43
CDK5RAP3-236ENST00000584991 RBM8AQ9Y5S9 174 aaKnown RBP17.71■□□□□ 0.43
CDK5RAP3-236ENST00000584991 RPAP1Q9BWH6 1393 aaPredicted RBP17.71■□□□□ 0.43
CDK5RAP3-236ENST00000584991 TCRBV5S4A2TA0A5A2 114 aa17.71■□□□□ 0.43
CDK5RAP3-236ENST00000584991 ZBTB22O15209 634 aa17.71■□□□□ 0.43
CDK5RAP3-236ENST00000584991 ZNF500O60304 480 aaPredicted RBP17.71■□□□□ 0.43
CDK5RAP3-236ENST00000584991 TPM2P07951 284 aa17.71■□□□□ 0.43
CDK5RAP3-236ENST00000584991 ZKSCAN1P17029 563 aaPredicted RBP17.71■□□□□ 0.43
CDK5RAP3-236ENST00000584991 KCNA3P22001 575 aa17.71■□□□□ 0.43
CDK5RAP3-236ENST00000584991 AK2P54819 239 aa17.71■□□□□ 0.43
CDK5RAP3-236ENST00000584991 ALDH8A1Q9H2A2 487 aaPredicted RBP17.71■□□□□ 0.43
CDK5RAP3-236ENST00000584991 TSPY26PQ9H489 355 aa17.71■□□□□ 0.43
CDK5RAP3-236ENST00000584991 TTLL6Q8N841 843 aa17.7■□□□□ 0.42
CDK5RAP3-236ENST00000584991 C7orf43Q8WVR3 580 aa17.7■□□□□ 0.42
CDK5RAP3-236ENST00000584991 RAI14Q9P0K7 980 aa17.7■□□□□ 0.42
CDK5RAP3-236ENST00000584991 RBM27Q9P2N5 1060 aaKnown RBP17.7■□□□□ 0.42
CDK5RAP3-236ENST00000584991 STX6O43752 255 aa17.69■□□□□ 0.42
CDK5RAP3-236ENST00000584991 OFD1O75665 1012 aa17.69■□□□□ 0.42
CDK5RAP3-236ENST00000584991 NECTIN1Q15223 517 aa17.69■□□□□ 0.42
CDK5RAP3-236ENST00000584991 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.69■□□□□ 0.42
CDK5RAP3-236ENST00000584991 ILDR2Q71H61 639 aa17.69■□□□□ 0.42
CDK5RAP3-236ENST00000584991 SGIP1Q9BQI5 828 aa17.69■□□□□ 0.42
CDK5RAP3-236ENST00000584991 ZC3H12CQ9C0D7 883 aaKnown RBP17.69■□□□□ 0.42
CDK5RAP3-236ENST00000584991 CCDC39Q9UFE4 941 aa17.69■□□□□ 0.42
CDK5RAP3-236ENST00000584991 SMC3Q9UQE7 1217 aa17.69■□□□□ 0.42
CDK5RAP3-236ENST00000584991 CYP46A1Q9Y6A2 500 aa17.69■□□□□ 0.42
CDK5RAP3-236ENST00000584991 C21orf2O43822 256 aa17.69■□□□□ 0.42
CDK5RAP3-236ENST00000584991 IL1R1P14778 569 aa17.69■□□□□ 0.42
CDK5RAP3-236ENST00000584991 PSMA5P28066 241 aa17.69■□□□□ 0.42
CDK5RAP3-236ENST00000584991 RUFY3Q7L099 469 aa17.69■□□□□ 0.42
CDK5RAP3-236ENST00000584991 USP48Q86UV5 1035 aa17.69■□□□□ 0.42
CDK5RAP3-236ENST00000584991 RASEFQ8IZ41 740 aa17.69■□□□□ 0.42
CDK5RAP3-236ENST00000584991 KIAA1551Q9HCM1 1747 aa17.69■□□□□ 0.42
CDK5RAP3-236ENST00000584991 PPP1R1BQ9UD71 204 aaPredicted RBP17.69■□□□□ 0.42
CDK5RAP3-236ENST00000584991 GPAA1O43292 621 aa17.68■□□□□ 0.42
CDK5RAP3-236ENST00000584991 TGFB2P61812 414 aa17.68■□□□□ 0.42
CDK5RAP3-236ENST00000584991 UBE2HP62256 183 aa17.68■□□□□ 0.42
CDK5RAP3-236ENST00000584991 CHD4Q14839 1912 aa17.68■□□□□ 0.42
CDK5RAP3-236ENST00000584991 CCDC88AQ3V6T2 1871 aa17.68■□□□□ 0.42
CDK5RAP3-236ENST00000584991 HSPD1P10809 573 aaKnown RBP17.67■□□□□ 0.42
CDK5RAP3-236ENST00000584991 CASTP20810 708 aaKnown RBP17.67■□□□□ 0.42
CDK5RAP3-236ENST00000584991 ANKRD1Q15327 319 aa17.67■□□□□ 0.42
CDK5RAP3-236ENST00000584991 CREB3L3Q68CJ9 461 aa17.67■□□□□ 0.42
CDK5RAP3-236ENST00000584991 WDR66Q8TBY9 1149 aa17.67■□□□□ 0.42
CDK5RAP3-236ENST00000584991 EYA3Q99504 573 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms