RNA–Protein interactions for RNA: ENST00000584558.5

ITGB4-212, Transcript of integrin subunit beta 4, humanhuman

TSL 1 (best)

Gene ITGB4, Length 2,895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-212ENST00000584558 HOMER1Q86YM7 354 aa14.77□□□□□ -0.05
ITGB4-212ENST00000584558 MNS1Q8NEH6 495 aa14.77□□□□□ -0.05
ITGB4-212ENST00000584558 PLA2G12BQ9BX93 195 aa14.77□□□□□ -0.05
ITGB4-212ENST00000584558 ORC3Q9UBD5 711 aaPredicted RBP14.77□□□□□ -0.05
ITGB4-212ENST00000584558 PCCAP05165 728 aaPredicted RBP14.76□□□□□ -0.05
ITGB4-212ENST00000584558 IQCB1Q15051 598 aa14.76□□□□□ -0.05
ITGB4-212ENST00000584558 CTR9Q6PD62 1173 aa14.76□□□□□ -0.05
ITGB4-212ENST00000584558 CWC27Q6UX04 472 aaKnown RBP14.76□□□□□ -0.05
ITGB4-212ENST00000584558 RBM43Q6ZSC3 357 aaKnown RBP14.76□□□□□ -0.05
ITGB4-212ENST00000584558 GOLGA6L1Q8N7Z2 621 aa14.76□□□□□ -0.05
ITGB4-212ENST00000584558 FBXW7Q969H0 707 aa14.76□□□□□ -0.05
ITGB4-212ENST00000584558 PPP1R13BQ96KQ4 1090 aa14.76□□□□□ -0.05
ITGB4-212ENST00000584558 SCAND2PQ9GZW5 306 aaPredicted RBP14.76□□□□□ -0.05
ITGB4-212ENST00000584558 KCNQ4P56696 695 aa14.76□□□□□ -0.05
ITGB4-212ENST00000584558 SARM1Q6SZW1 724 aa14.76□□□□□ -0.05
ITGB4-212ENST00000584558 SNRKQ9NRH2 765 aa14.76□□□□□ -0.05
ITGB4-212ENST00000584558 COL5A3P25940 1745 aaPredicted RBP14.76□□□□□ -0.05
ITGB4-212ENST00000584558 ST3GAL1Q11201 340 aa14.75□□□□□ -0.05
ITGB4-212ENST00000584558 SMC1AQ14683 1233 aaKnown RBP14.75□□□□□ -0.05
ITGB4-212ENST00000584558 ME3Q16798 604 aa14.75□□□□□ -0.05
ITGB4-212ENST00000584558 E4F1Q66K89 784 aaPredicted RBP14.75□□□□□ -0.05
ITGB4-212ENST00000584558 LEO1Q8WVC0 666 aaPredicted RBP14.75□□□□□ -0.05
ITGB4-212ENST00000584558 EPC1Q9H2F5 836 aa14.75□□□□□ -0.05
ITGB4-212ENST00000584558 ATP5JP18859 108 aa14.75□□□□□ -0.05
ITGB4-212ENST00000584558 IL6STP40189 918 aaPredicted RBP14.75□□□□□ -0.05
ITGB4-212ENST00000584558 CCDC93Q567U6 631 aa14.75□□□□□ -0.05
ITGB4-212ENST00000584558 SEPT12Q8IYM1 358 aa14.75□□□□□ -0.05
ITGB4-212ENST00000584558 AK7Q96M32 723 aa14.75□□□□□ -0.05
ITGB4-212ENST00000584558 ZNF330Q9Y3S2 320 aaPredicted RBP14.75□□□□□ -0.05
ITGB4-212ENST00000584558 SASH3O75995 380 aa14.75□□□□□ -0.05
ITGB4-212ENST00000584558 ADCK5Q3MIX3 580 aa14.75□□□□□ -0.05
ITGB4-212ENST00000584558 ZBTB38Q8NAP3 1195 aaPredicted RBP14.75□□□□□ -0.05
ITGB4-212ENST00000584558 GPR108Q9NPR9 543 aa14.75□□□□□ -0.05
ITGB4-212ENST00000584558 DNAI1Q9UI46 699 aa14.75□□□□□ -0.05
ITGB4-212ENST00000584558 CDHR2Q9BYE9 1310 aa14.74□□□□□ -0.05
ITGB4-212ENST00000584558 CIAO1O76071 339 aa14.74□□□□□ -0.05
ITGB4-212ENST00000584558 CSF1RP07333 972 aa14.74□□□□□ -0.05
ITGB4-212ENST00000584558 INTS5Q6P9B9 1019 aaKnown RBP14.74□□□□□ -0.05
ITGB4-212ENST00000584558 NLRP10Q86W26 655 aa14.74□□□□□ -0.05
ITGB4-212ENST00000584558 FBXO18Q8NFZ0 1043 aa14.74□□□□□ -0.05
ITGB4-212ENST00000584558 GOLGA5Q8TBA6 731 aa14.74□□□□□ -0.05
ITGB4-212ENST00000584558 SH2B1Q9NRF2 756 aaPredicted RBP14.74□□□□□ -0.05
ITGB4-212ENST00000584558 ZNF609O15014 1411 aa14.74□□□□□ -0.05
ITGB4-212ENST00000584558 ZSCAN31Q96LW9 406 aaPredicted RBP14.74□□□□□ -0.05
ITGB4-212ENST00000584558 DRC1Q96MC2 740 aa14.74□□□□□ -0.05
ITGB4-212ENST00000584558 BOLA2Q9H3K6 86 aa14.74□□□□□ -0.05
ITGB4-212ENST00000584558 TRPC5Q9UL62 973 aaPredicted RBP14.74□□□□□ -0.05
ITGB4-212ENST00000584558 ERVV-1B6SEH8 477 aa14.73□□□□□ -0.05
ITGB4-212ENST00000584558 GPATCH11Q8N954 259 aa14.73□□□□□ -0.05
ITGB4-212ENST00000584558 PGBD1Q96JS3 809 aa14.73□□□□□ -0.05
ITGB4-212ENST00000584558 CYP46A1Q9Y6A2 500 aa14.73□□□□□ -0.05
ITGB4-212ENST00000584558 MYH3P11055 1940 aa14.73□□□□□ -0.05
ITGB4-212ENST00000584558 EYA2O00167 538 aa14.73□□□□□ -0.05
ITGB4-212ENST00000584558 CAVIN2O95810 425 aa14.73□□□□□ -0.05
ITGB4-212ENST00000584558 PRPF40BQ6NWY9 871 aaKnown RBP14.73□□□□□ -0.05
ITGB4-212ENST00000584558 DBNDD2Q9BQY9 259 aa14.73□□□□□ -0.05
ITGB4-212ENST00000584558 THSD7AQ9UPZ6 1657 aa14.72□□□□□ -0.05
ITGB4-212ENST00000584558 MYH14Q7Z406 1995 aaKnown RBP14.72□□□□□ -0.05
ITGB4-212ENST00000584558 URI1O94763 535 aaPredicted RBP14.72□□□□□ -0.05
ITGB4-212ENST00000584558 TBC1D8O95759 1140 aa14.72□□□□□ -0.05
ITGB4-212ENST00000584558 IL15P40933 162 aaPredicted RBP14.72□□□□□ -0.05
ITGB4-212ENST00000584558 EIF5P55010 431 aaKnown RBP14.72□□□□□ -0.05
ITGB4-212ENST00000584558 GSDMDP57764 484 aa14.72□□□□□ -0.05
ITGB4-212ENST00000584558 LRRC24Q50LG9 513 aa14.72□□□□□ -0.05
ITGB4-212ENST00000584558 HSP90AB3PQ58FF7 597 aa14.72□□□□□ -0.05
ITGB4-212ENST00000584558 VPS53Q5VIR6 699 aa14.72□□□□□ -0.05
ITGB4-212ENST00000584558 FAM89AQ96GI7 184 aa14.72□□□□□ -0.05
ITGB4-212ENST00000584558 ZNF594Q96JF6 807 aaPredicted RBP14.72□□□□□ -0.05
ITGB4-212ENST00000584558 CARD6Q9BX69 1037 aa14.72□□□□□ -0.05
ITGB4-212ENST00000584558 APPP05067 770 aa14.72□□□□□ -0.05
ITGB4-212ENST00000584558 GNL2Q13823 731 aaKnown RBP14.72□□□□□ -0.05
ITGB4-212ENST00000584558 STX1AQ16623 288 aa14.72□□□□□ -0.05
ITGB4-212ENST00000584558 REXO1L1PQ8IX06 675 aa14.72□□□□□ -0.05
ITGB4-212ENST00000584558 RUFY2Q8WXA3 655 aa14.72□□□□□ -0.05
ITGB4-212ENST00000584558 KCNB2Q92953 911 aa14.72□□□□□ -0.05
ITGB4-212ENST00000584558 MYCBPQ99417 103 aaPredicted RBP14.72□□□□□ -0.05
ITGB4-212ENST00000584558 JRKLQ9Y4A0 524 aa14.72□□□□□ -0.05
ITGB4-212ENST00000584558 HIP1O00291 1037 aa14.71□□□□□ -0.05
ITGB4-212ENST00000584558 CEBPZQ03701 1054 aaKnown RBP14.71□□□□□ -0.05
ITGB4-212ENST00000584558 TTC31Q49AM3 519 aaPredicted RBP14.71□□□□□ -0.05
ITGB4-212ENST00000584558 NOM1Q5C9Z4 860 aaKnown RBP14.71□□□□□ -0.05
ITGB4-212ENST00000584558 RFX7Q2KHR2 1363 aa14.71□□□□□ -0.05
ITGB4-212ENST00000584558 MED23Q9ULK4 1368 aa14.71□□□□□ -0.05
ITGB4-212ENST00000584558 A0A1B0GUL7 405 aa14.71□□□□□ -0.05
ITGB4-212ENST00000584558 PTH1RQ03431 593 aa14.71□□□□□ -0.05
ITGB4-212ENST00000584558 NMIQ13287 307 aaPredicted RBP14.71□□□□□ -0.05
ITGB4-212ENST00000584558 ITPK1Q13572 414 aa14.71□□□□□ -0.05
ITGB4-212ENST00000584558 ZNF34Q8IZ26 560 aa14.71□□□□□ -0.05
ITGB4-212ENST00000584558 SYNE4Q8N205 404 aa14.71□□□□□ -0.05
ITGB4-212ENST00000584558 AOPEPQ8N6M6 819 aa14.71□□□□□ -0.05
ITGB4-212ENST00000584558 FAM227BQ96M60 508 aa14.71□□□□□ -0.05
ITGB4-212ENST00000584558 PUS3Q9BZE2 481 aaKnown RBP14.71□□□□□ -0.05
ITGB4-212ENST00000584558 ADAM21Q9UKJ8 722 aa14.71□□□□□ -0.05
ITGB4-212ENST00000584558 TPCN1Q9ULQ1 816 aa14.71□□□□□ -0.05
ITGB4-212ENST00000584558 LOC102724428A0A0B4J2F2 783 aa14.71□□□□□ -0.06
ITGB4-212ENST00000584558 PDCP20941 246 aa14.71□□□□□ -0.06
ITGB4-212ENST00000584558 SIK1P57059 783 aa14.71□□□□□ -0.06
ITGB4-212ENST00000584558 EVCP57679 992 aa14.71□□□□□ -0.06
ITGB4-212ENST00000584558 DZIP3Q86Y13 1208 aaKnown RBP14.71□□□□□ -0.06
ITGB4-212ENST00000584558 HAUS7Q99871 368 aa14.71□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms