RNA–Protein interactions for RNA: ENST00000584550.1

GGA3-219, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-219ENST00000584550 CTGFP29279 349 aa13.02□□□□□ -0.33
GGA3-219ENST00000584550 TNFAIP1Q13829 316 aa13.02□□□□□ -0.33
GGA3-219ENST00000584550 SPDYE2Q495Y8 402 aa13.02□□□□□ -0.33
GGA3-219ENST00000584550 TSPYL6Q8N831 410 aa13.02□□□□□ -0.33
GGA3-219ENST00000584550 LRCH3Q96II8 777 aa13.02□□□□□ -0.33
GGA3-219ENST00000584550 CPA4Q9UI42 421 aa13.02□□□□□ -0.33
GGA3-219ENST00000584550 TTF2Q9UNY4 1162 aaKnown RBP13.02□□□□□ -0.33
GGA3-219ENST00000584550 ANKRD18BA2A2Z9 1011 aa13.01□□□□□ -0.33
GGA3-219ENST00000584550 PSMC4P43686 418 aa13.01□□□□□ -0.33
GGA3-219ENST00000584550 GNAI1P63096 354 aa13.01□□□□□ -0.33
GGA3-219ENST00000584550 DIEXFQ68CQ4 756 aaKnown RBP13.01□□□□□ -0.33
GGA3-219ENST00000584550 G2E3Q7L622 706 aa13.01□□□□□ -0.33
GGA3-219ENST00000584550 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.01□□□□□ -0.33
GGA3-219ENST00000584550 RAET1EQ8TD07 263 aa13.01□□□□□ -0.33
GGA3-219ENST00000584550 HTATIP2Q9BUP3 242 aa13.01□□□□□ -0.33
GGA3-219ENST00000584550 PRO3102Q9H379 93 aa13.01□□□□□ -0.33
GGA3-219ENST00000584550 IFT57Q9NWB7 429 aa13.01□□□□□ -0.33
GGA3-219ENST00000584550 BIN2Q9UBW5 565 aaPredicted RBP13.01□□□□□ -0.33
GGA3-219ENST00000584550 SALL2Q9Y467 1007 aaPredicted RBP13.01□□□□□ -0.33
GGA3-219ENST00000584550 IRF6O14896 467 aa13□□□□□ -0.33
GGA3-219ENST00000584550 FMNL1O95466 1100 aaPredicted RBP13□□□□□ -0.33
GGA3-219ENST00000584550 GNRH1P01148 92 aa13□□□□□ -0.33
GGA3-219ENST00000584550 CSF1RP07333 972 aa13□□□□□ -0.33
GGA3-219ENST00000584550 CETPP11597 493 aa13□□□□□ -0.33
GGA3-219ENST00000584550 CCL5P13501 91 aa13□□□□□ -0.33
GGA3-219ENST00000584550 GJA8P48165 433 aa13□□□□□ -0.33
GGA3-219ENST00000584550 CACNB3P54284 484 aa13□□□□□ -0.33
GGA3-219ENST00000584550 FKBP1AP62942 108 aaKnown RBP13□□□□□ -0.33
GGA3-219ENST00000584550 GCKRQ14397 625 aa13□□□□□ -0.33
GGA3-219ENST00000584550 DZIP1LQ8IYY4 767 aaKnown RBP13□□□□□ -0.33
GGA3-219ENST00000584550 NKX2-3Q8TAU0 364 aa13□□□□□ -0.33
GGA3-219ENST00000584550 ZKSCAN4Q969J2 545 aaPredicted RBP13□□□□□ -0.33
GGA3-219ENST00000584550 TRIM47Q96LD4 638 aa13□□□□□ -0.33
GGA3-219ENST00000584550 RNF208Q9H0X6 261 aa13□□□□□ -0.33
GGA3-219ENST00000584550 CHMP3Q9Y3E7 222 aa13□□□□□ -0.33
GGA3-219ENST00000584550 RIPOR2Q9Y4F9 1068 aa13□□□□□ -0.33
GGA3-219ENST00000584550 NR2E3Q9Y5X4 410 aa13□□□□□ -0.33
GGA3-219ENST00000584550 SPDYE5A6NIY4 337 aa12.99□□□□□ -0.33
GGA3-219ENST00000584550 ZBTB7BO15156 539 aaPredicted RBP12.99□□□□□ -0.33
GGA3-219ENST00000584550 OSBPP22059 807 aa12.99□□□□□ -0.33
GGA3-219ENST00000584550 GRK4P32298 578 aa12.99□□□□□ -0.33
GGA3-219ENST00000584550 PRMT2P55345 433 aa12.99□□□□□ -0.33
GGA3-219ENST00000584550 MFSD14BQ5SR56 506 aa12.99□□□□□ -0.33
GGA3-219ENST00000584550 C15orf52Q6ZUT6 534 aaKnown RBP12.99□□□□□ -0.33
GGA3-219ENST00000584550 UBE2Q1Q7Z7E8 422 aa12.99□□□□□ -0.33
GGA3-219ENST00000584550 PLA2G12BQ9BX93 195 aa12.99□□□□□ -0.33
GGA3-219ENST00000584550 STAP2Q9UGK3 403 aa12.99□□□□□ -0.33
GGA3-219ENST00000584550 SRRDQ9UH36 339 aa12.99□□□□□ -0.33
GGA3-219ENST00000584550 SNCAIPQ9Y6H5 919 aa12.99□□□□□ -0.33
GGA3-219ENST00000584550 GJB1P08034 283 aa12.98□□□□□ -0.33
GGA3-219ENST00000584550 TNNI2P48788 182 aa12.98□□□□□ -0.33
GGA3-219ENST00000584550 CASP7P55210 303 aa12.98□□□□□ -0.33
GGA3-219ENST00000584550 SNAPC2Q13487 334 aa12.98□□□□□ -0.33
GGA3-219ENST00000584550 C17orf99Q6UX52 265 aa12.98□□□□□ -0.33
GGA3-219ENST00000584550 ZNF594Q96JF6 807 aaPredicted RBP12.98□□□□□ -0.33
GGA3-219ENST00000584550 WRNIP1Q96S55 665 aa12.98□□□□□ -0.33
GGA3-219ENST00000584550 STK31Q9BXU1 1019 aa12.98□□□□□ -0.33
GGA3-219ENST00000584550 SERPINA10Q9UK55 444 aa12.98□□□□□ -0.33
GGA3-219ENST00000584550 A0A1B0GUL6 1792 aa12.98□□□□□ -0.33
GGA3-219ENST00000584550 MYPNQ86TC9 1320 aa12.97□□□□□ -0.33
GGA3-219ENST00000584550 EVI5O60447 810 aa12.97□□□□□ -0.33
GGA3-219ENST00000584550 FARP2O94887 1054 aaPredicted RBP12.97□□□□□ -0.33
GGA3-219ENST00000584550 HOXD10P28358 340 aa12.97□□□□□ -0.33
GGA3-219ENST00000584550 CRKP46108 304 aa12.97□□□□□ -0.33
GGA3-219ENST00000584550 GYG1P46976 350 aa12.97□□□□□ -0.33
GGA3-219ENST00000584550 IFIT5Q13325 482 aaKnown RBP12.97□□□□□ -0.33
GGA3-219ENST00000584550 GRIK5Q16478 980 aa12.97□□□□□ -0.33
GGA3-219ENST00000584550 ERO1BQ86YB8 467 aa12.97□□□□□ -0.33
GGA3-219ENST00000584550 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.97□□□□□ -0.33
GGA3-219ENST00000584550 UNC80Q8N2C7 3258 aa12.97□□□□□ -0.33
GGA3-219ENST00000584550 ARAP2Q8WZ64 1704 aa12.96□□□□□ -0.33
GGA3-219ENST00000584550 PDHXO00330 501 aa12.96□□□□□ -0.33
GGA3-219ENST00000584550 SLC4A2P04920 1241 aa12.96□□□□□ -0.33
GGA3-219ENST00000584550 CALD1Q05682 793 aaKnown RBP12.96□□□□□ -0.33
GGA3-219ENST00000584550 MIGA2Q7L4E1 593 aa12.96□□□□□ -0.33
GGA3-219ENST00000584550 U2AF1L4Q8WU68 220 aaKnown RBP12.96□□□□□ -0.33
GGA3-219ENST00000584550 TSR2Q969E8 191 aaKnown RBP12.96□□□□□ -0.33
GGA3-219ENST00000584550 UNC93B1Q9H1C4 597 aa12.96□□□□□ -0.33
GGA3-219ENST00000584550 ZCCHC17Q9NP64 241 aaKnown RBP12.96□□□□□ -0.33
GGA3-219ENST00000584550 FAM205AQ6ZU69 1335 aa12.95□□□□□ -0.34
GGA3-219ENST00000584550 MNX1P50219 401 aaPredicted RBP12.95□□□□□ -0.34
GGA3-219ENST00000584550 UBXN2AP68543 259 aa12.95□□□□□ -0.34
GGA3-219ENST00000584550 FOXO4P98177 505 aa12.95□□□□□ -0.34
GGA3-219ENST00000584550 PRKCZQ05513 592 aa12.95□□□□□ -0.34
GGA3-219ENST00000584550 PPIL2Q13356 520 aa12.95□□□□□ -0.34
GGA3-219ENST00000584550 TAF7LQ5H9L4 462 aa12.95□□□□□ -0.34
GGA3-219ENST00000584550 MIER1Q8N108 512 aa12.95□□□□□ -0.34
GGA3-219ENST00000584550 TDRD7Q8NHU6 1098 aaKnown RBP12.95□□□□□ -0.34
GGA3-219ENST00000584550 CHMP4AQ9BY43 222 aa12.95□□□□□ -0.34
GGA3-219ENST00000584550 MYH16Q9H6N6 1097 aa12.95□□□□□ -0.34
GGA3-219ENST00000584550 CNNM1Q9NRU3 951 aa12.95□□□□□ -0.34
GGA3-219ENST00000584550 GABRQQ9UN88 632 aa12.95□□□□□ -0.34
GGA3-219ENST00000584550 IQSEC3Q9UPP2 1182 aaPredicted RBP12.95□□□□□ -0.34
GGA3-219ENST00000584550 SGPL1O95470 568 aa12.94□□□□□ -0.34
GGA3-219ENST00000584550 TFRCP02786 760 aaKnown RBP12.94□□□□□ -0.34
GGA3-219ENST00000584550 HIBADHP31937 336 aaKnown RBP12.94□□□□□ -0.34
GGA3-219ENST00000584550 LDHAL6AQ6ZMR3 332 aa12.94□□□□□ -0.34
GGA3-219ENST00000584550 Q7L0L9 218 aa12.94□□□□□ -0.34
GGA3-219ENST00000584550 CUL9Q8IWT3 2517 aa12.93□□□□□ -0.34
GGA3-219ENST00000584550 A0A1W2PPC1 479 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms