RNA–Protein interactions for RNA: ENST00000584186.1

CDK5RAP3-233, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 482 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-233ENST00000584186 PPP2R3BQ9Y5P8 575 aa16.95■□□□□ 0.3
CDK5RAP3-233ENST00000584186 COL1A1P02452 1464 aaPredicted RBP16.94■□□□□ 0.3
CDK5RAP3-233ENST00000584186 TRPA1O75762 1119 aa16.94■□□□□ 0.3
CDK5RAP3-233ENST00000584186 RASA3Q14644 834 aa16.94■□□□□ 0.3
CDK5RAP3-233ENST00000584186 COPRSQ9NQ92 184 aa16.94■□□□□ 0.3
CDK5RAP3-233ENST00000584186 TCP10L2B9ZVM9 353 aa16.93■□□□□ 0.3
CDK5RAP3-233ENST00000584186 PPP1R12BO60237 982 aaPredicted RBP16.93■□□□□ 0.3
CDK5RAP3-233ENST00000584186 GNAI2P04899 355 aa16.93■□□□□ 0.3
CDK5RAP3-233ENST00000584186 TNFAIP1Q13829 316 aa16.93■□□□□ 0.3
CDK5RAP3-233ENST00000584186 SUPT20HL1Q3ZLR7 823 aa16.93■□□□□ 0.3
CDK5RAP3-233ENST00000584186 SPDYE2Q495Y8 402 aa16.93■□□□□ 0.3
CDK5RAP3-233ENST00000584186 NBPF12Q5TAG4 269 aaPredicted RBP16.93■□□□□ 0.3
CDK5RAP3-233ENST00000584186 TMEM57Q8N5G2 664 aa16.93■□□□□ 0.3
CDK5RAP3-233ENST00000584186 TEKT1Q969V4 418 aa16.93■□□□□ 0.3
CDK5RAP3-233ENST00000584186 RNF186Q9NXI6 227 aa16.93■□□□□ 0.3
CDK5RAP3-233ENST00000584186 ECM29Q5VYK3 1845 aa16.92■□□□□ 0.3
CDK5RAP3-233ENST00000584186 GNL3LQ9NVN8 582 aaKnown RBP16.92■□□□□ 0.3
CDK5RAP3-233ENST00000584186 ARAP2Q8WZ64 1704 aa16.92■□□□□ 0.3
CDK5RAP3-233ENST00000584186 ADORA1P30542 326 aa16.91■□□□□ 0.3
CDK5RAP3-233ENST00000584186 LDLRAD1Q5T700 205 aa16.91■□□□□ 0.3
CDK5RAP3-233ENST00000584186 FTSJ3Q8IY81 847 aaKnown RBP16.91■□□□□ 0.3
CDK5RAP3-233ENST00000584186 REM2Q8IYK8 340 aaPredicted RBP16.91■□□□□ 0.3
CDK5RAP3-233ENST00000584186 WDR66Q8TBY9 1149 aa16.91■□□□□ 0.3
CDK5RAP3-233ENST00000584186 SAGE1Q9NXZ1 904 aa16.91■□□□□ 0.3
CDK5RAP3-233ENST00000584186 ZBED9Q6R2W3 1325 aa16.91■□□□□ 0.3
CDK5RAP3-233ENST00000584186 SSC5DA1L4H1 1573 aa16.9■□□□□ 0.3
CDK5RAP3-233ENST00000584186 PHKA1P46020 1223 aa16.9■□□□□ 0.3
CDK5RAP3-233ENST00000584186 CACNB3P54284 484 aa16.9■□□□□ 0.3
CDK5RAP3-233ENST00000584186 TIMM10P62072 90 aa16.9■□□□□ 0.3
CDK5RAP3-233ENST00000584186 HDLBPQ00341 1268 aaKnown RBP16.9■□□□□ 0.3
CDK5RAP3-233ENST00000584186 SLC10A4Q96EP9 437 aa16.9■□□□□ 0.3
CDK5RAP3-233ENST00000584186 SUGT1Q9Y2Z0 365 aa16.9■□□□□ 0.3
CDK5RAP3-233ENST00000584186 MAST3O60307 1309 aa16.9■□□□□ 0.3
CDK5RAP3-233ENST00000584186 IREB2P48200 963 aaKnown RBP16.89■□□□□ 0.29
CDK5RAP3-233ENST00000584186 TNNI2P48788 182 aa16.89■□□□□ 0.29
CDK5RAP3-233ENST00000584186 TFCP2Q12800 502 aa16.89■□□□□ 0.29
CDK5RAP3-233ENST00000584186 MTX1Q13505 466 aa16.89■□□□□ 0.29
CDK5RAP3-233ENST00000584186 CLMNQ96JQ2 1002 aa16.89■□□□□ 0.29
CDK5RAP3-233ENST00000584186 TMEM39BQ9GZU3 492 aa16.89■□□□□ 0.29
CDK5RAP3-233ENST00000584186 TMOD2Q9NZR1 351 aa16.89■□□□□ 0.29
CDK5RAP3-233ENST00000584186 PNMA6EA0A0J9YXQ4 647 aa16.88■□□□□ 0.29
CDK5RAP3-233ENST00000584186 SPRYD7Q5W111 196 aa16.88■□□□□ 0.29
CDK5RAP3-233ENST00000584186 ITPRIPQ8IWB1 547 aa16.88■□□□□ 0.29
CDK5RAP3-233ENST00000584186 CDAN1Q8IWY9 1227 aa16.88■□□□□ 0.29
CDK5RAP3-233ENST00000584186 ABHD8Q96I13 439 aa16.88■□□□□ 0.29
CDK5RAP3-233ENST00000584186 ZDHHC15Q96MV8 337 aa16.88■□□□□ 0.29
CDK5RAP3-233ENST00000584186 DENND2AQ9ULE3 1009 aa16.88■□□□□ 0.29
CDK5RAP3-233ENST00000584186 AKAP2Q9Y2D5 859 aa16.88■□□□□ 0.29
CDK5RAP3-233ENST00000584186 A0A1B0GUL7 405 aa16.87■□□□□ 0.29
CDK5RAP3-233ENST00000584186 USP2O75604 605 aaPredicted RBP16.87■□□□□ 0.29
CDK5RAP3-233ENST00000584186 LDHBP07195 334 aaKnown RBP16.87■□□□□ 0.29
CDK5RAP3-233ENST00000584186 SREBF2Q12772 1141 aa16.87■□□□□ 0.29
CDK5RAP3-233ENST00000584186 MAP3K11Q16584 847 aa16.87■□□□□ 0.29
CDK5RAP3-233ENST00000584186 CCDC102BQ68D86 513 aa16.87■□□□□ 0.29
CDK5RAP3-233ENST00000584186 APOBEC3HQ6NTF7 200 aaKnown RBP16.87■□□□□ 0.29
CDK5RAP3-233ENST00000584186 HHIPL2Q6UWX4 724 aa16.87■□□□□ 0.29
CDK5RAP3-233ENST00000584186 NEUROD6Q96NK8 337 aa16.87■□□□□ 0.29
CDK5RAP3-233ENST00000584186 C1orf115Q9H7X2 142 aa16.87■□□□□ 0.29
CDK5RAP3-233ENST00000584186 CASP8AP2Q9UKL3 1982 aa16.87■□□□□ 0.29
CDK5RAP3-233ENST00000584186 AKAP11Q9UKA4 1901 aa16.86■□□□□ 0.29
CDK5RAP3-233ENST00000584186 SEMA3EO15041 775 aa16.86■□□□□ 0.29
CDK5RAP3-233ENST00000584186 TBC1D8O95759 1140 aa16.86■□□□□ 0.29
CDK5RAP3-233ENST00000584186 PRDX5P30044 214 aa16.86■□□□□ 0.29
CDK5RAP3-233ENST00000584186 G3BP1Q13283 466 aaKnown RBP eCLIP16.86■□□□□ 0.29
CDK5RAP3-233ENST00000584186 DGKZQ13574 1117 aa16.86■□□□□ 0.29
CDK5RAP3-233ENST00000584186 DIXDC1Q155Q3 683 aa16.86■□□□□ 0.29
CDK5RAP3-233ENST00000584186 XAGE2Q96GT9 111 aa16.86■□□□□ 0.29
CDK5RAP3-233ENST00000584186 TEPSINQ96N21 525 aa16.86■□□□□ 0.29
CDK5RAP3-233ENST00000584186 MRIQ9BWK5 157 aa16.86■□□□□ 0.29
CDK5RAP3-233ENST00000584186 MYH13Q9UKX3 1938 aa16.86■□□□□ 0.29
CDK5RAP3-233ENST00000584186 RLBP1P12271 317 aa16.85■□□□□ 0.29
CDK5RAP3-233ENST00000584186 TM4SF4P48230 202 aa16.85■□□□□ 0.29
CDK5RAP3-233ENST00000584186 GORABQ5T7V8 394 aa16.85■□□□□ 0.29
CDK5RAP3-233ENST00000584186 ANKRD13AQ8IZ07 590 aa16.85■□□□□ 0.29
CDK5RAP3-233ENST00000584186 WNK4Q96J92 1243 aa16.85■□□□□ 0.29
CDK5RAP3-233ENST00000584186 MCOLN1Q9GZU1 580 aa16.85■□□□□ 0.29
CDK5RAP3-233ENST00000584186 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.85■□□□□ 0.29
CDK5RAP3-233ENST00000584186 OS9Q13438 667 aaPredicted RBP16.84■□□□□ 0.29
CDK5RAP3-233ENST00000584186 RASGRF1Q13972 1273 aa16.84■□□□□ 0.29
CDK5RAP3-233ENST00000584186 MVPQ14764 893 aaKnown RBP16.84■□□□□ 0.29
CDK5RAP3-233ENST00000584186 ELP3Q9H9T3 547 aa16.84■□□□□ 0.29
CDK5RAP3-233ENST00000584186 ABCF2Q9UG63 623 aa16.84■□□□□ 0.29
CDK5RAP3-233ENST00000584186 DAGLAQ9Y4D2 1042 aa16.84■□□□□ 0.29
CDK5RAP3-233ENST00000584186 UNCXA6NJT0 531 aa16.83■□□□□ 0.28
CDK5RAP3-233ENST00000584186 CCDC85CA6NKD9 419 aa16.83■□□□□ 0.28
CDK5RAP3-233ENST00000584186 SALL1Q9NSC2 1324 aa16.83■□□□□ 0.28
CDK5RAP3-233ENST00000584186 MANSC4A6NHS7 340 aaPredicted RBP16.82■□□□□ 0.28
CDK5RAP3-233ENST00000584186 ZBTB48P10074 688 aaPredicted RBP16.82■□□□□ 0.28
CDK5RAP3-233ENST00000584186 TCP10Q12799 353 aa16.82■□□□□ 0.28
CDK5RAP3-233ENST00000584186 CDC42EP5Q6NZY7 148 aa16.82■□□□□ 0.28
CDK5RAP3-233ENST00000584186 FAM83AQ86UY5 434 aa16.82■□□□□ 0.28
CDK5RAP3-233ENST00000584186 DZIP1Q86YF9 867 aaKnown RBP16.82■□□□□ 0.28
CDK5RAP3-233ENST00000584186 ZGPATQ8N5A5 531 aaKnown RBP16.82■□□□□ 0.28
CDK5RAP3-233ENST00000584186 PANK1Q8TE04 598 aa16.82■□□□□ 0.28
CDK5RAP3-233ENST00000584186 USP40Q9NVE5 1235 aa16.82■□□□□ 0.28
CDK5RAP3-233ENST00000584186 ZBTB7BO15156 539 aaPredicted RBP16.81■□□□□ 0.28
CDK5RAP3-233ENST00000584186 SURF6O75683 361 aaKnown RBP16.81■□□□□ 0.28
CDK5RAP3-233ENST00000584186 MAP3K9P80192 1104 aa16.81■□□□□ 0.28
CDK5RAP3-233ENST00000584186 ATP8B2P98198 1209 aa16.81■□□□□ 0.28
CDK5RAP3-233ENST00000584186 FKBP1CQ5VVH2 108 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms