RNA–Protein interactions for RNA: ENST00000584025.1

ITGB4-210, Transcript of integrin subunit beta 4, humanhuman

TSL 5

Gene ITGB4, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-210ENST00000584025 SPATA5Q8NB90 893 aa18.88■□□□□ 0.61
ITGB4-210ENST00000584025 MTMR14Q8NCE2 650 aa18.88■□□□□ 0.61
ITGB4-210ENST00000584025 ZBED3Q96IU2 234 aaPredicted RBP18.88■□□□□ 0.61
ITGB4-210ENST00000584025 LRRCC1Q9C099 1032 aa18.88■□□□□ 0.61
ITGB4-210ENST00000584025 DCTPP1Q9H773 170 aa18.88■□□□□ 0.61
ITGB4-210ENST00000584025 HMG20BQ9P0W2 317 aa18.88■□□□□ 0.61
ITGB4-210ENST00000584025 ABCF2Q9UG63 623 aa18.88■□□□□ 0.61
ITGB4-210ENST00000584025 SERPINA10Q9UK55 444 aa18.88■□□□□ 0.61
ITGB4-210ENST00000584025 PCDHAC2Q9Y5I4 1007 aa18.88■□□□□ 0.61
ITGB4-210ENST00000584025 PDS5AQ29RF7 1337 aaKnown RBP18.88■□□□□ 0.61
ITGB4-210ENST00000584025 SALL1Q9NSC2 1324 aa18.88■□□□□ 0.61
ITGB4-210ENST00000584025 ADM5C9JUS6 153 aa18.87■□□□□ 0.61
ITGB4-210ENST00000584025 MYO1BO43795 1136 aa18.87■□□□□ 0.61
ITGB4-210ENST00000584025 IFIT2P09913 472 aaKnown RBP18.87■□□□□ 0.61
ITGB4-210ENST00000584025 MCAMP43121 646 aa18.87■□□□□ 0.61
ITGB4-210ENST00000584025 IRX6P78412 446 aaPredicted RBP18.87■□□□□ 0.61
ITGB4-210ENST00000584025 HDLBPQ00341 1268 aaKnown RBP18.87■□□□□ 0.61
ITGB4-210ENST00000584025 PI16Q6UXB8 463 aa18.87■□□□□ 0.61
ITGB4-210ENST00000584025 TEKT1Q969V4 418 aa18.87■□□□□ 0.61
ITGB4-210ENST00000584025 PITPNM2Q9BZ72 1349 aa18.87■□□□□ 0.61
ITGB4-210ENST00000584025 MYH7P12883 1935 aa18.86■□□□□ 0.61
ITGB4-210ENST00000584025 MAST2Q6P0Q8 1798 aa18.86■□□□□ 0.61
ITGB4-210ENST00000584025 SPDYE2BA6NHP3 402 aa18.86■□□□□ 0.61
ITGB4-210ENST00000584025 SPDYE6P0CI01 402 aa18.86■□□□□ 0.61
ITGB4-210ENST00000584025 PRDX5P30044 214 aa18.86■□□□□ 0.61
ITGB4-210ENST00000584025 HTRA3P83110 453 aa18.86■□□□□ 0.61
ITGB4-210ENST00000584025 SPTY2D1Q68D10 685 aaPredicted RBP18.86■□□□□ 0.61
ITGB4-210ENST00000584025 PRMT6Q96LA8 375 aaPredicted RBP18.86■□□□□ 0.61
ITGB4-210ENST00000584025 SNRKQ9NRH2 765 aa18.86■□□□□ 0.61
ITGB4-210ENST00000584025 SCAF8Q9UPN6 1271 aaKnown RBP18.86■□□□□ 0.61
ITGB4-210ENST00000584025 DOCK2Q92608 1830 aa18.86■□□□□ 0.61
ITGB4-210ENST00000584025 TMEM88BA6NKF7 163 aa18.85■□□□□ 0.61
ITGB4-210ENST00000584025 SMARCA5O60264 1052 aaPredicted RBP18.85■□□□□ 0.61
ITGB4-210ENST00000584025 ZNF408Q9H9D4 720 aa18.85■□□□□ 0.61
ITGB4-210ENST00000584025 CLRN2A0PK11 232 aa18.84■□□□□ 0.61
ITGB4-210ENST00000584025 DLK2Q6UY11 383 aa18.84■□□□□ 0.61
ITGB4-210ENST00000584025 ERICH6Q7L0X2 663 aa18.84■□□□□ 0.61
ITGB4-210ENST00000584025 DZIP1Q86YF9 867 aaKnown RBP18.84■□□□□ 0.61
ITGB4-210ENST00000584025 APOBEC3FQ8IUX4 373 aaKnown RBP18.84■□□□□ 0.61
ITGB4-210ENST00000584025 ZNF512BQ96KM6 892 aaPredicted RBP18.84■□□□□ 0.61
ITGB4-210ENST00000584025 MRIQ9BWK5 157 aa18.84■□□□□ 0.61
ITGB4-210ENST00000584025 VEZTQ9HBM0 779 aa18.84■□□□□ 0.61
ITGB4-210ENST00000584025 CREBZFQ9NS37 354 aa18.84■□□□□ 0.61
ITGB4-210ENST00000584025 CELF2O95319 508 aaKnown RBP18.83■□□□□ 0.6
ITGB4-210ENST00000584025 HHIPL2Q6UWX4 724 aa18.83■□□□□ 0.6
ITGB4-210ENST00000584025 TBC1D9Q6ZT07 1266 aa18.83■□□□□ 0.6
ITGB4-210ENST00000584025 AOX1Q06278 1338 aa18.82■□□□□ 0.6
ITGB4-210ENST00000584025 HDAC1Q13547 482 aaPredicted RBP18.82■□□□□ 0.6
ITGB4-210ENST00000584025 DIXDC1Q155Q3 683 aa18.82■□□□□ 0.6
ITGB4-210ENST00000584025 CDCA5Q96FF9 252 aa18.82■□□□□ 0.6
ITGB4-210ENST00000584025 ZDHHC15Q96MV8 337 aa18.82■□□□□ 0.6
ITGB4-210ENST00000584025 TDRD3Q9H7E2 651 aaKnown RBP18.82■□□□□ 0.6
ITGB4-210ENST00000584025 ZNF70Q9UC06 446 aaPredicted RBP18.82■□□□□ 0.6
ITGB4-210ENST00000584025 CDK5RAP2Q96SN8 1893 aa18.82■□□□□ 0.6
ITGB4-210ENST00000584025 ZAP70P43403 619 aa18.81■□□□□ 0.6
ITGB4-210ENST00000584025 SPDYE2Q495Y8 402 aa18.81■□□□□ 0.6
ITGB4-210ENST00000584025 CST9Q5W186 159 aa18.81■□□□□ 0.6
ITGB4-210ENST00000584025 SLF2Q8IX21 1173 aa18.81■□□□□ 0.6
ITGB4-210ENST00000584025 RAI14Q9P0K7 980 aa18.81■□□□□ 0.6
ITGB4-210ENST00000584025 LRP2BPQ9P2M1 347 aa18.81■□□□□ 0.6
ITGB4-210ENST00000584025 ZBTB47Q9UFB7 747 aaPredicted RBP18.81■□□□□ 0.6
ITGB4-210ENST00000584025 ABT1Q9ULW3 272 aaKnown RBP18.81■□□□□ 0.6
ITGB4-210ENST00000584025 PRAMEF18Q5VWM3 479 aa18.8■□□□□ 0.6
ITGB4-210ENST00000584025 RWDD1Q9H446 243 aaPredicted RBP18.8■□□□□ 0.6
ITGB4-210ENST00000584025 TMOD2Q9NZR1 351 aa18.8■□□□□ 0.6
ITGB4-210ENST00000584025 DAGLAQ9Y4D2 1042 aa18.8■□□□□ 0.6
ITGB4-210ENST00000584025 CYP2E1P05181 493 aaPredicted RBP18.79■□□□□ 0.6
ITGB4-210ENST00000584025 GSTO1P78417 241 aa18.79■□□□□ 0.6
ITGB4-210ENST00000584025 MECOMQ03112 1051 aa18.79■□□□□ 0.6
ITGB4-210ENST00000584025 APOBEC3HQ6NTF7 200 aaKnown RBP18.79■□□□□ 0.6
ITGB4-210ENST00000584025 NDUFB9Q9Y6M9 179 aa18.79■□□□□ 0.6
ITGB4-210ENST00000584025 TCP10L2B9ZVM9 353 aa18.78■□□□□ 0.6
ITGB4-210ENST00000584025 LDHCP07864 332 aa18.78■□□□□ 0.6
ITGB4-210ENST00000584025 TNFAIP1Q13829 316 aa18.78■□□□□ 0.6
ITGB4-210ENST00000584025 GCC1Q96CN9 775 aa18.78■□□□□ 0.6
ITGB4-210ENST00000584025 DEFB129Q9H1M3 183 aa18.78■□□□□ 0.6
ITGB4-210ENST00000584025 PAPPA2Q9BXP8 1791 aa18.78■□□□□ 0.6
ITGB4-210ENST00000584025 NF2P35240 595 aa18.77■□□□□ 0.6
ITGB4-210ENST00000584025 ANKRD45Q5TZF3 282 aa18.77■□□□□ 0.6
ITGB4-210ENST00000584025 C2orf69Q8N8R5 385 aa18.77■□□□□ 0.6
ITGB4-210ENST00000584025 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.77■□□□□ 0.6
ITGB4-210ENST00000584025 DNAJC2Q99543 621 aaKnown RBP18.77■□□□□ 0.6
ITGB4-210ENST00000584025 GBA2Q9HCG7 927 aaPredicted RBP18.77■□□□□ 0.6
ITGB4-210ENST00000584025 PIH1D3Q9NQM4 214 aaKnown RBP18.77■□□□□ 0.6
ITGB4-210ENST00000584025 PPP2R3BQ9Y5P8 575 aa18.77■□□□□ 0.6
ITGB4-210ENST00000584025 FOCADQ5VW36 1801 aa18.77■□□□□ 0.59
ITGB4-210ENST00000584025 MROH7-TTC4A0A0A0MT08 1334 aa18.76■□□□□ 0.59
ITGB4-210ENST00000584025 TNNI2P48788 182 aa18.76■□□□□ 0.59
ITGB4-210ENST00000584025 CACNB3P54284 484 aa18.76■□□□□ 0.59
ITGB4-210ENST00000584025 NSUN4Q96CB9 384 aaKnown RBP18.76■□□□□ 0.59
ITGB4-210ENST00000584025 GPATCH3Q96I76 525 aa18.76■□□□□ 0.59
ITGB4-210ENST00000584025 BOLA2Q9H3K6 86 aa18.76■□□□□ 0.59
ITGB4-210ENST00000584025 USP40Q9NVE5 1235 aa18.76■□□□□ 0.59
ITGB4-210ENST00000584025 MKRN1Q9UHC7 482 aaKnown RBP18.76■□□□□ 0.59
ITGB4-210ENST00000584025 GAKO14976 1311 aa18.75■□□□□ 0.59
ITGB4-210ENST00000584025 IDH1O75874 414 aaKnown RBP18.75■□□□□ 0.59
ITGB4-210ENST00000584025 ATP5JP18859 108 aa18.75■□□□□ 0.59
ITGB4-210ENST00000584025 TTLL12Q14166 644 aaPredicted RBP18.75■□□□□ 0.59
ITGB4-210ENST00000584025 RASA3Q14644 834 aa18.75■□□□□ 0.59
ITGB4-210ENST00000584025 NAA16Q6N069 864 aaPredicted RBP18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms