RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 GMLQ99445 158 aa10.04□□□□□ -0.8
SMCHD1-210ENST00000583800 MYOZ2Q9NPC6 264 aa10.04□□□□□ -0.8
SMCHD1-210ENST00000583800 MED23Q9ULK4 1368 aa10.03□□□□□ -0.8
SMCHD1-210ENST00000583800 ECM29Q5VYK3 1845 aa10.03□□□□□ -0.8
SMCHD1-210ENST00000583800 DDX58O95786 925 aaKnown RBP10.03□□□□□ -0.8
SMCHD1-210ENST00000583800 USP17L8P0C7I0 530 aa10.03□□□□□ -0.8
SMCHD1-210ENST00000583800 ATP2B4P23634 1241 aa10.03□□□□□ -0.8
SMCHD1-210ENST00000583800 CTSWP56202 376 aa10.03□□□□□ -0.8
SMCHD1-210ENST00000583800 SOX10P56693 466 aa10.03□□□□□ -0.8
SMCHD1-210ENST00000583800 PDE4DQ08499 809 aa10.03□□□□□ -0.8
SMCHD1-210ENST00000583800 MFSD10Q14728 455 aa10.03□□□□□ -0.8
SMCHD1-210ENST00000583800 MOB2Q70IA6 237 aa10.03□□□□□ -0.8
SMCHD1-210ENST00000583800 TSPYL6Q8N831 410 aa10.03□□□□□ -0.8
SMCHD1-210ENST00000583800 ZBED2Q9BTP6 218 aa10.03□□□□□ -0.8
SMCHD1-210ENST00000583800 MXD3Q9BW11 206 aa10.03□□□□□ -0.8
SMCHD1-210ENST00000583800 PRKRIP1Q9H875 184 aaPredicted RBP10.03□□□□□ -0.8
SMCHD1-210ENST00000583800 MAP3K2Q9Y2U5 619 aa10.03□□□□□ -0.8
SMCHD1-210ENST00000583800 TNRC18O15417 2968 aaPredicted RBP10.02□□□□□ -0.8
SMCHD1-210ENST00000583800 USP17L3A6NCW0 530 aa10.02□□□□□ -0.81
SMCHD1-210ENST00000583800 USP17L4A6NCW7 530 aa10.02□□□□□ -0.81
SMCHD1-210ENST00000583800 IGKV5-2P06315 115 aa10.02□□□□□ -0.81
SMCHD1-210ENST00000583800 PTPREP23469 700 aa10.02□□□□□ -0.81
SMCHD1-210ENST00000583800 FOSBP53539 338 aa10.02□□□□□ -0.81
SMCHD1-210ENST00000583800 CALD1Q05682 793 aaKnown RBP10.02□□□□□ -0.81
SMCHD1-210ENST00000583800 CCDC30Q5VVM6 783 aa10.02□□□□□ -0.81
SMCHD1-210ENST00000583800 PRAMEF18Q5VWM3 479 aa10.02□□□□□ -0.81
SMCHD1-210ENST00000583800 USP17L1Q7RTZ2 530 aa10.02□□□□□ -0.81
SMCHD1-210ENST00000583800 PODNQ7Z5L7 613 aa10.02□□□□□ -0.81
SMCHD1-210ENST00000583800 MRPL50Q8N5N7 158 aaKnown RBP10.02□□□□□ -0.81
SMCHD1-210ENST00000583800 FBXW7Q969H0 707 aa10.02□□□□□ -0.81
SMCHD1-210ENST00000583800 CDC5LQ99459 802 aaKnown RBP10.02□□□□□ -0.81
SMCHD1-210ENST00000583800 GREM2Q9H772 168 aa10.02□□□□□ -0.81
SMCHD1-210ENST00000583800 CACNA1FO60840 1977 aa10.02□□□□□ -0.81
SMCHD1-210ENST00000583800 PITPNM2Q9BZ72 1349 aa10.02□□□□□ -0.81
SMCHD1-210ENST00000583800 PI4KAP2A4QPH2 592 aa10.01□□□□□ -0.81
SMCHD1-210ENST00000583800 FKBP1BP68106 108 aa10.01□□□□□ -0.81
SMCHD1-210ENST00000583800 CWF19L2Q2TBE0 894 aaKnown RBP10.01□□□□□ -0.81
SMCHD1-210ENST00000583800 NBPF9Q3BBW0 867 aa10.01□□□□□ -0.81
SMCHD1-210ENST00000583800 KSR2Q6VAB6 950 aa10.01□□□□□ -0.81
SMCHD1-210ENST00000583800 GPIHBP1Q8IV16 184 aa10.01□□□□□ -0.81
SMCHD1-210ENST00000583800 PI4KAP1Q8N8J0 262 aa10.01□□□□□ -0.81
SMCHD1-210ENST00000583800 TTLL11Q8NHH1 800 aa10.01□□□□□ -0.81
SMCHD1-210ENST00000583800 TSR2Q969E8 191 aaKnown RBP10.01□□□□□ -0.81
SMCHD1-210ENST00000583800 DDX27Q96GQ7 796 aaKnown RBP10.01□□□□□ -0.81
SMCHD1-210ENST00000583800 MINPP1Q9UNW1 487 aa10.01□□□□□ -0.81
SMCHD1-210ENST00000583800 UBE2Q2LH0YL09 131 aa10□□□□□ -0.81
SMCHD1-210ENST00000583800 CCT4P50991 539 aaKnown RBP10□□□□□ -0.81
SMCHD1-210ENST00000583800 DACT2Q5SW24 774 aa10□□□□□ -0.81
SMCHD1-210ENST00000583800 CTU1Q7Z7A3 348 aaKnown RBP10□□□□□ -0.81
SMCHD1-210ENST00000583800 TXNRD3Q86VQ6 643 aa10□□□□□ -0.81
SMCHD1-210ENST00000583800 BSDC1Q9NW68 430 aaPredicted RBP10□□□□□ -0.81
SMCHD1-210ENST00000583800 LAMB1P07942 1786 aa9.99□□□□□ -0.81
SMCHD1-210ENST00000583800 NEURL1BA8MQ27 555 aa9.99□□□□□ -0.81
SMCHD1-210ENST00000583800 APBB1O00213 710 aa9.99□□□□□ -0.81
SMCHD1-210ENST00000583800 WNT10BO00744 389 aa9.99□□□□□ -0.81
SMCHD1-210ENST00000583800 SASH1O94885 1247 aa9.99□□□□□ -0.81
SMCHD1-210ENST00000583800 KLRK1P26718 216 aa9.99□□□□□ -0.81
SMCHD1-210ENST00000583800 NEXNQ0ZGT2 675 aa9.99□□□□□ -0.81
SMCHD1-210ENST00000583800 CAMK2BQ13554 666 aa9.99□□□□□ -0.81
SMCHD1-210ENST00000583800 TTLL12Q14166 644 aaPredicted RBP9.99□□□□□ -0.81
SMCHD1-210ENST00000583800 G2E3Q7L622 706 aa9.99□□□□□ -0.81
SMCHD1-210ENST00000583800 UBE3BQ7Z3V4 1068 aa9.99□□□□□ -0.81
SMCHD1-210ENST00000583800 TBC1D8O95759 1140 aa9.98□□□□□ -0.81
SMCHD1-210ENST00000583800 IGHMBP2P38935 993 aaKnown RBP9.98□□□□□ -0.81
SMCHD1-210ENST00000583800 STRIP1Q5VSL9 837 aa9.98□□□□□ -0.81
SMCHD1-210ENST00000583800 STK31Q9BXU1 1019 aa9.98□□□□□ -0.81
SMCHD1-210ENST00000583800 COA1Q9GZY4 146 aa9.98□□□□□ -0.81
SMCHD1-210ENST00000583800 MYO3BQ8WXR4 1341 aa9.98□□□□□ -0.81
SMCHD1-210ENST00000583800 OTOFQ9HC10 1997 aa9.97□□□□□ -0.81
SMCHD1-210ENST00000583800 H7C1W4 665 aa9.97□□□□□ -0.81
SMCHD1-210ENST00000583800 ITGA6P23229 1130 aa9.97□□□□□ -0.81
SMCHD1-210ENST00000583800 NF2P35240 595 aa9.97□□□□□ -0.81
SMCHD1-210ENST00000583800 PRKG1Q13976 671 aa9.97□□□□□ -0.81
SMCHD1-210ENST00000583800 TWISTNBQ3B726 338 aaPredicted RBP9.97□□□□□ -0.81
SMCHD1-210ENST00000583800 PPP1R15BQ5SWA1 713 aa9.97□□□□□ -0.81
SMCHD1-210ENST00000583800 KIAA0825Q8IV33 1275 aa9.97□□□□□ -0.81
SMCHD1-210ENST00000583800 OGFOD1Q8N543 542 aa9.97□□□□□ -0.81
SMCHD1-210ENST00000583800 ZNF296Q8WUU4 475 aaPredicted RBP9.97□□□□□ -0.81
SMCHD1-210ENST00000583800 CHMP4AQ9BY43 222 aa9.97□□□□□ -0.81
SMCHD1-210ENST00000583800 HDAC9Q9UKV0 1011 aa9.97□□□□□ -0.81
SMCHD1-210ENST00000583800 HPS5Q9UPZ3 1129 aa9.97□□□□□ -0.81
SMCHD1-210ENST00000583800 LEMD3Q9Y2U8 911 aa9.97□□□□□ -0.81
SMCHD1-210ENST00000583800 ZNF804BA4D1E1 1349 aa9.97□□□□□ -0.81
SMCHD1-210ENST00000583800 PDIA4P13667 645 aaKnown RBP9.96□□□□□ -0.82
SMCHD1-210ENST00000583800 CASP7P55210 303 aa9.96□□□□□ -0.82
SMCHD1-210ENST00000583800 GTF2IP78347 998 aa9.96□□□□□ -0.82
SMCHD1-210ENST00000583800 GCKRQ14397 625 aa9.96□□□□□ -0.82
SMCHD1-210ENST00000583800 CCDC184Q52MB2 194 aa9.96□□□□□ -0.82
SMCHD1-210ENST00000583800 TTLL5Q6EMB2 1281 aa9.96□□□□□ -0.82
SMCHD1-210ENST00000583800 PLA2G12BQ9BX93 195 aa9.96□□□□□ -0.82
SMCHD1-210ENST00000583800 NBPF3Q9H094 633 aa9.96□□□□□ -0.82
SMCHD1-210ENST00000583800 FZD1Q9UP38 647 aa9.96□□□□□ -0.82
SMCHD1-210ENST00000583800 ARAP2Q8WZ64 1704 aa9.96□□□□□ -0.82
SMCHD1-210ENST00000583800 GPR25O00155 361 aa9.95□□□□□ -0.82
SMCHD1-210ENST00000583800 SNAP23O00161 211 aa9.95□□□□□ -0.82
SMCHD1-210ENST00000583800 MLLT3P42568 568 aaPredicted RBP9.95□□□□□ -0.82
SMCHD1-210ENST00000583800 KCNJ4P48050 445 aa9.95□□□□□ -0.82
SMCHD1-210ENST00000583800 TM4SF4P48230 202 aa9.95□□□□□ -0.82
SMCHD1-210ENST00000583800 PTPN12Q05209 780 aaKnown RBP9.95□□□□□ -0.82
SMCHD1-210ENST00000583800 CHRNDQ07001 517 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms