RNA–Protein interactions for RNA: ENST00000583311.1

MIR3960-201, Transcript of microRNA 3960, humanhuman

BASIC

Gene MIR3960, Length 91 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR3960-201ENST00000583311 PPIL4Q8WUA2 492 aaKnown RBP eCLIP29.88■■■□□ 2.37
MIR3960-201ENST00000583311 TEKT1Q969V4 418 aa29.88■■■□□ 2.37
MIR3960-201ENST00000583311 DCPSQ96C86 337 aaKnown RBP29.88■■■□□ 2.37
MIR3960-201ENST00000583311 WNT10BO00744 389 aa29.87■■■□□ 2.37
MIR3960-201ENST00000583311 MYO1BO43795 1136 aa29.87■■■□□ 2.37
MIR3960-201ENST00000583311 IGHDP01880 384 aa29.87■■■□□ 2.37
MIR3960-201ENST00000583311 PRDX5P30044 214 aa29.87■■■□□ 2.37
MIR3960-201ENST00000583311 MAP1SQ66K74 1059 aaPredicted RBP29.87■■■□□ 2.37
MIR3960-201ENST00000583311 PI16Q6UXB8 463 aa29.87■■■□□ 2.37
MIR3960-201ENST00000583311 SLF2Q8IX21 1173 aa29.87■■■□□ 2.37
MIR3960-201ENST00000583311 CNTROBQ8N137 903 aa29.87■■■□□ 2.37
MIR3960-201ENST00000583311 IGSF3O75054 1194 aa29.86■■■□□ 2.37
MIR3960-201ENST00000583311 CRKP46108 304 aa29.86■■■□□ 2.37
MIR3960-201ENST00000583311 DZIP1Q86YF9 867 aaKnown RBP29.86■■■□□ 2.37
MIR3960-201ENST00000583311 SNRKQ9NRH2 765 aa29.86■■■□□ 2.37
MIR3960-201ENST00000583311 SPDYE2BA6NHP3 402 aa29.85■■■□□ 2.37
MIR3960-201ENST00000583311 SPDYE6P0CI01 402 aa29.85■■■□□ 2.37
MIR3960-201ENST00000583311 NBPF9Q3BBW0 867 aa29.85■■■□□ 2.37
MIR3960-201ENST00000583311 ZBED3Q96IU2 234 aaPredicted RBP29.85■■■□□ 2.37
MIR3960-201ENST00000583311 GGA3Q9NZ52 723 aa29.85■■■□□ 2.37
MIR3960-201ENST00000583311 PITPNM2Q9BZ72 1349 aa29.85■■■□□ 2.37
MIR3960-201ENST00000583311 ZAP70P43403 619 aa29.84■■■□□ 2.37
MIR3960-201ENST00000583311 HHIPL2Q6UWX4 724 aa29.84■■■□□ 2.37
MIR3960-201ENST00000583311 CDC37L1Q7L3B6 337 aa29.84■■■□□ 2.37
MIR3960-201ENST00000583311 LRP2BPQ9P2M1 347 aa29.84■■■□□ 2.37
MIR3960-201ENST00000583311 ATP5JP18859 108 aa29.83■■■□□ 2.37
MIR3960-201ENST00000583311 ANGEL2Q5VTE6 544 aaKnown RBP29.83■■■□□ 2.37
MIR3960-201ENST00000583311 ZDHHC15Q96MV8 337 aa29.83■■■□□ 2.37
MIR3960-201ENST00000583311 ECHDC1Q9NTX5 307 aa29.83■■■□□ 2.37
MIR3960-201ENST00000583311 AKAP11Q9UKA4 1901 aa29.83■■■□□ 2.37
MIR3960-201ENST00000583311 CYP2E1P05181 493 aaPredicted RBP29.82■■■□□ 2.36
MIR3960-201ENST00000583311 GSTO1P78417 241 aa29.82■■■□□ 2.36
MIR3960-201ENST00000583311 SULF1Q8IWU6 871 aa29.82■■■□□ 2.36
MIR3960-201ENST00000583311 RAI14Q9P0K7 980 aa29.82■■■□□ 2.36
MIR3960-201ENST00000583311 TTF1Q15361 905 aaPredicted RBP29.81■■■□□ 2.36
MIR3960-201ENST00000583311 TBC1D9Q6ZT07 1266 aa29.81■■■□□ 2.36
MIR3960-201ENST00000583311 PRMT6Q96LA8 375 aaPredicted RBP29.81■■■□□ 2.36
MIR3960-201ENST00000583311 B4GALNT3Q6L9W6 998 aa29.8■■■□□ 2.36
MIR3960-201ENST00000583311 KRT26Q7Z3Y9 468 aa29.8■■■□□ 2.36
MIR3960-201ENST00000583311 APOBEC3FQ8IUX4 373 aaKnown RBP29.8■■■□□ 2.36
MIR3960-201ENST00000583311 TTC41PQ6P2S7 1318 aa29.79■■■□□ 2.36
MIR3960-201ENST00000583311 ITGBL1O95965 494 aaPredicted RBP29.79■■■□□ 2.36
MIR3960-201ENST00000583311 ASTN2O75129 1339 aaPredicted RBP29.78■■■□□ 2.36
MIR3960-201ENST00000583311 LDHCP07864 332 aa29.78■■■□□ 2.36
MIR3960-201ENST00000583311 MECOMQ03112 1051 aa29.78■■■□□ 2.36
MIR3960-201ENST00000583311 BOLA2Q9H3K6 86 aa29.78■■■□□ 2.36
MIR3960-201ENST00000583311 PCDHAC2Q9Y5I4 1007 aa29.78■■■□□ 2.36
MIR3960-201ENST00000583311 ECM29Q5VYK3 1845 aa29.78■■■□□ 2.36
MIR3960-201ENST00000583311 ERC2O15083 957 aa29.77■■■□□ 2.36
MIR3960-201ENST00000583311 DIXDC1Q155Q3 683 aa29.77■■■□□ 2.36
MIR3960-201ENST00000583311 TMED8Q6PL24 325 aaPredicted RBP29.77■■■□□ 2.36
MIR3960-201ENST00000583311 CHD1LQ86WJ1 897 aa29.77■■■□□ 2.36
MIR3960-201ENST00000583311 FAM163AQ96GL9 167 aaPredicted RBP29.77■■■□□ 2.36
MIR3960-201ENST00000583311 DNAJC2Q99543 621 aaKnown RBP29.77■■■□□ 2.36
MIR3960-201ENST00000583311 HAUS7Q99871 368 aa29.77■■■□□ 2.36
MIR3960-201ENST00000583311 GLIS2Q9BZE0 524 aaPredicted RBP29.77■■■□□ 2.36
MIR3960-201ENST00000583311 DAGLAQ9Y4D2 1042 aa29.77■■■□□ 2.36
MIR3960-201ENST00000583311 PASKQ96RG2 1323 aa29.76■■■□□ 2.36
MIR3960-201ENST00000583311 MX1P20591 662 aa29.76■■■□□ 2.35
MIR3960-201ENST00000583311 NUCB1Q02818 461 aa29.76■■■□□ 2.35
MIR3960-201ENST00000583311 MAP3K12Q12852 859 aa29.76■■■□□ 2.35
MIR3960-201ENST00000583311 USP48Q86UV5 1035 aa29.76■■■□□ 2.35
MIR3960-201ENST00000583311 NSUN4Q96CB9 384 aaKnown RBP29.76■■■□□ 2.35
MIR3960-201ENST00000583311 LNPKQ9C0E8 428 aa29.76■■■□□ 2.35
MIR3960-201ENST00000583311 TMOD2Q9NZR1 351 aa29.76■■■□□ 2.35
MIR3960-201ENST00000583311 GAKO14976 1311 aa29.75■■■□□ 2.35
MIR3960-201ENST00000583311 TNFAIP1Q13829 316 aa29.75■■■□□ 2.35
MIR3960-201ENST00000583311 SPDYE2Q495Y8 402 aa29.75■■■□□ 2.35
MIR3960-201ENST00000583311 NAA16Q6N069 864 aaPredicted RBP29.75■■■□□ 2.35
MIR3960-201ENST00000583311 APOBEC3HQ6NTF7 200 aaKnown RBP29.75■■■□□ 2.35
MIR3960-201ENST00000583311 TDRD3Q9H7E2 651 aaKnown RBP29.75■■■□□ 2.35
MIR3960-201ENST00000583311 VEZTQ9HBM0 779 aa29.75■■■□□ 2.35
MIR3960-201ENST00000583311 PIH1D3Q9NQM4 214 aaKnown RBP29.75■■■□□ 2.35
MIR3960-201ENST00000583311 PAG1Q9NWQ8 432 aa29.75■■■□□ 2.35
MIR3960-201ENST00000583311 NDUFB9Q9Y6M9 179 aa29.75■■■□□ 2.35
MIR3960-201ENST00000583311 MROH7-TTC4A0A0A0MT08 1334 aa29.74■■■□□ 2.35
MIR3960-201ENST00000583311 CLRN2A0PK11 232 aa29.74■■■□□ 2.35
MIR3960-201ENST00000583311 GOLIM4O00461 696 aa29.74■■■□□ 2.35
MIR3960-201ENST00000583311 IDH1O75874 414 aaKnown RBP29.74■■■□□ 2.35
MIR3960-201ENST00000583311 ZNF70Q9UC06 446 aaPredicted RBP29.74■■■□□ 2.35
MIR3960-201ENST00000583311 MAST2Q6P0Q8 1798 aa29.74■■■□□ 2.35
MIR3960-201ENST00000583311 ANTXR1Q9H6X2 564 aa29.73■■■□□ 2.35
MIR3960-201ENST00000583311 ADM5C9JUS6 153 aa29.72■■■□□ 2.35
MIR3960-201ENST00000583311 GLRX3O76003 335 aaKnown RBP29.72■■■□□ 2.35
MIR3960-201ENST00000583311 HSPA6P17066 643 aa29.72■■■□□ 2.35
MIR3960-201ENST00000583311 APLP1P51693 650 aa29.72■■■□□ 2.35
MIR3960-201ENST00000583311 NOL10Q9BSC4 688 aaKnown RBP29.72■■■□□ 2.35
MIR3960-201ENST00000583311 PPP2R3BQ9Y5P8 575 aa29.72■■■□□ 2.35
MIR3960-201ENST00000583311 MYH2Q9UKX2 1941 aa29.72■■■□□ 2.35
MIR3960-201ENST00000583311 TRAF5O00463 557 aa29.71■■■□□ 2.35
MIR3960-201ENST00000583311 TNNI2P48788 182 aa29.71■■■□□ 2.35
MIR3960-201ENST00000583311 OTUD7AQ8TE49 926 aaPredicted RBP29.71■■■□□ 2.35
MIR3960-201ENST00000583311 SALL3Q9BXA9 1300 aa29.71■■■□□ 2.35
MIR3960-201ENST00000583311 TSHZ3Q63HK5 1081 aa29.7■■■□□ 2.35
MIR3960-201ENST00000583311 DOCK2Q92608 1830 aa29.69■■■□□ 2.34
MIR3960-201ENST00000583311 GPR75-ASB3A0A0A6YYF3 556 aa29.69■■■□□ 2.34
MIR3960-201ENST00000583311 MAP4K4O95819 1239 aaPredicted RBP29.69■■■□□ 2.34
MIR3960-201ENST00000583311 BTDP43251 543 aa29.69■■■□□ 2.34
MIR3960-201ENST00000583311 FKBP1CQ5VVH2 108 aa29.69■■■□□ 2.34
MIR3960-201ENST00000583311 ERICH6BQ5W0A0 696 aa29.69■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms