RNA–Protein interactions for RNA: ENST00000582370.1

PDLIM1P3-201, Transcript of PDZ and LIM domain 1 pseudogene 3, humanhuman

BASIC

Gene PDLIM1P3, Length 599 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P3-201ENST00000582370 MS4A4AQ96JQ5 239 aa10.95□□□□□ -0.66
PDLIM1P3-201ENST00000582370 CDC5LQ99459 802 aaKnown RBP10.95□□□□□ -0.66
PDLIM1P3-201ENST00000582370 COL25A1Q9BXS0 654 aaPredicted RBP10.95□□□□□ -0.66
PDLIM1P3-201ENST00000582370 STXBP5LQ9Y2K9 1186 aa10.95□□□□□ -0.66
PDLIM1P3-201ENST00000582370 SPTBN5Q9NRC6 3674 aaKnown RBP10.95□□□□□ -0.66
PDLIM1P3-201ENST00000582370 CCL15-CCL14A0A0B4J2E2 113 aa10.94□□□□□ -0.66
PDLIM1P3-201ENST00000582370 TLR2O60603 784 aa10.94□□□□□ -0.66
PDLIM1P3-201ENST00000582370 USP2O75604 605 aaPredicted RBP10.94□□□□□ -0.66
PDLIM1P3-201ENST00000582370 GJB1P08034 283 aa10.94□□□□□ -0.66
PDLIM1P3-201ENST00000582370 GTF2A2P52657 109 aa10.94□□□□□ -0.66
PDLIM1P3-201ENST00000582370 MTFR1Q15390 333 aa10.94□□□□□ -0.66
PDLIM1P3-201ENST00000582370 CCL15Q16663 113 aa10.94□□□□□ -0.66
PDLIM1P3-201ENST00000582370 DZIP1LQ8IYY4 767 aaKnown RBP10.94□□□□□ -0.66
PDLIM1P3-201ENST00000582370 BRI3BPQ8WY22 251 aa10.94□□□□□ -0.66
PDLIM1P3-201ENST00000582370 FRAT1Q92837 279 aaPredicted RBP10.94□□□□□ -0.66
PDLIM1P3-201ENST00000582370 ZCCHC17Q9NP64 241 aaKnown RBP10.94□□□□□ -0.66
PDLIM1P3-201ENST00000582370 NOB1Q9ULX3 412 aaKnown RBP10.94□□□□□ -0.66
PDLIM1P3-201ENST00000582370 SUPT16HQ9Y5B9 1047 aaKnown RBP10.94□□□□□ -0.66
PDLIM1P3-201ENST00000582370 BCAR3O75815 825 aa10.93□□□□□ -0.66
PDLIM1P3-201ENST00000582370 PCCAP05165 728 aaPredicted RBP10.93□□□□□ -0.66
PDLIM1P3-201ENST00000582370 NBPF12Q5TAG4 269 aaPredicted RBP10.93□□□□□ -0.66
PDLIM1P3-201ENST00000582370 ARHGAP39Q9C0H5 1083 aa10.93□□□□□ -0.66
PDLIM1P3-201ENST00000582370 ELP3Q9H9T3 547 aa10.93□□□□□ -0.66
PDLIM1P3-201ENST00000582370 BSDC1Q9NW68 430 aaPredicted RBP10.93□□□□□ -0.66
PDLIM1P3-201ENST00000582370 DDX19BQ9UMR2 479 aa10.93□□□□□ -0.66
PDLIM1P3-201ENST00000582370 MINPP1Q9UNW1 487 aa10.93□□□□□ -0.66
PDLIM1P3-201ENST00000582370 FARP2O94887 1054 aaPredicted RBP10.92□□□□□ -0.66
PDLIM1P3-201ENST00000582370 CAPN2P17655 700 aa10.92□□□□□ -0.66
PDLIM1P3-201ENST00000582370 RIC3Q7Z5B4 369 aa10.92□□□□□ -0.66
PDLIM1P3-201ENST00000582370 FAM43AQ8N2R8 423 aa10.92□□□□□ -0.66
PDLIM1P3-201ENST00000582370 DEFB123Q8N688 67 aa10.92□□□□□ -0.66
PDLIM1P3-201ENST00000582370 CCDC191Q8NCU4 936 aa10.92□□□□□ -0.66
PDLIM1P3-201ENST00000582370 CCDC85AQ96PX6 553 aaPredicted RBP10.92□□□□□ -0.66
PDLIM1P3-201ENST00000582370 LEMD3Q9Y2U8 911 aa10.92□□□□□ -0.66
PDLIM1P3-201ENST00000582370 CLRN2A0PK11 232 aa10.91□□□□□ -0.66
PDLIM1P3-201ENST00000582370 SPDYE2BA6NHP3 402 aa10.91□□□□□ -0.66
PDLIM1P3-201ENST00000582370 EVI5O60447 810 aa10.91□□□□□ -0.66
PDLIM1P3-201ENST00000582370 ALDH1L1O75891 902 aa10.91□□□□□ -0.66
PDLIM1P3-201ENST00000582370 SPDYE6P0CI01 402 aa10.91□□□□□ -0.66
PDLIM1P3-201ENST00000582370 CCL5P13501 91 aa10.91□□□□□ -0.66
PDLIM1P3-201ENST00000582370 TRIM27P14373 513 aa10.91□□□□□ -0.66
PDLIM1P3-201ENST00000582370 GRK4P32298 578 aa10.91□□□□□ -0.66
PDLIM1P3-201ENST00000582370 UBXN2AP68543 259 aa10.91□□□□□ -0.66
PDLIM1P3-201ENST00000582370 GTF2IP78347 998 aa10.91□□□□□ -0.66
PDLIM1P3-201ENST00000582370 TNFAIP1Q13829 316 aa10.91□□□□□ -0.66
PDLIM1P3-201ENST00000582370 TXNRD3Q86VQ6 643 aa10.91□□□□□ -0.66
PDLIM1P3-201ENST00000582370 HELBQ8NG08 1087 aaPredicted RBP10.91□□□□□ -0.66
PDLIM1P3-201ENST00000582370 LINS1Q8NG48 757 aa10.91□□□□□ -0.66
PDLIM1P3-201ENST00000582370 DNAAF4Q8WXU2 420 aa10.91□□□□□ -0.66
PDLIM1P3-201ENST00000582370 VEZTQ9HBM0 779 aa10.91□□□□□ -0.66
PDLIM1P3-201ENST00000582370 SRRDQ9UH36 339 aa10.91□□□□□ -0.66
PDLIM1P3-201ENST00000582370 PI4KAP2A4QPH2 592 aa10.9□□□□□ -0.66
PDLIM1P3-201ENST00000582370 HOXD10P28358 340 aa10.9□□□□□ -0.66
PDLIM1P3-201ENST00000582370 BMP8BP34820 402 aa10.9□□□□□ -0.66
PDLIM1P3-201ENST00000582370 CTSWP56202 376 aa10.9□□□□□ -0.66
PDLIM1P3-201ENST00000582370 RASA3Q14644 834 aa10.9□□□□□ -0.66
PDLIM1P3-201ENST00000582370 CFAP100Q494V2 611 aa10.9□□□□□ -0.66
PDLIM1P3-201ENST00000582370 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.9□□□□□ -0.66
PDLIM1P3-201ENST00000582370 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.9□□□□□ -0.66
PDLIM1P3-201ENST00000582370 PI4KAP1Q8N8J0 262 aa10.9□□□□□ -0.66
PDLIM1P3-201ENST00000582370 RAET1EQ8TD07 263 aa10.9□□□□□ -0.66
PDLIM1P3-201ENST00000582370 U2AF1L4Q8WU68 220 aaKnown RBP10.9□□□□□ -0.66
PDLIM1P3-201ENST00000582370 METTL22Q9BUU2 404 aaPredicted RBP10.9□□□□□ -0.66
PDLIM1P3-201ENST00000582370 SRCIN1Q9C0H9 1055 aa10.9□□□□□ -0.66
PDLIM1P3-201ENST00000582370 RNF208Q9H0X6 261 aa10.9□□□□□ -0.66
PDLIM1P3-201ENST00000582370 CWC25Q9NXE8 425 aaPredicted RBP10.9□□□□□ -0.66
PDLIM1P3-201ENST00000582370 STAP2Q9UGK3 403 aa10.9□□□□□ -0.66
PDLIM1P3-201ENST00000582370 RIPOR2Q9Y4F9 1068 aa10.9□□□□□ -0.66
PDLIM1P3-201ENST00000582370 CSADQ9Y600 493 aa10.9□□□□□ -0.66
PDLIM1P3-201ENST00000582370 GNAI3P08754 354 aa10.89□□□□□ -0.67
PDLIM1P3-201ENST00000582370 CETPP11597 493 aa10.89□□□□□ -0.67
PDLIM1P3-201ENST00000582370 VGLL4Q14135 290 aa10.89□□□□□ -0.67
PDLIM1P3-201ENST00000582370 MVPQ14764 893 aaKnown RBP10.89□□□□□ -0.67
PDLIM1P3-201ENST00000582370 CNKSR2Q8WXI2 1034 aa10.89□□□□□ -0.67
PDLIM1P3-201ENST00000582370 PRMT6Q96LA8 375 aaPredicted RBP10.89□□□□□ -0.67
PDLIM1P3-201ENST00000582370 TRIM47Q96LD4 638 aa10.89□□□□□ -0.67
PDLIM1P3-201ENST00000582370 MTMR10Q9NXD2 777 aa10.89□□□□□ -0.67
PDLIM1P3-201ENST00000582370 MYPNQ86TC9 1320 aa10.88□□□□□ -0.67
PDLIM1P3-201ENST00000582370 SPDYE5A6NIY4 337 aa10.88□□□□□ -0.67
PDLIM1P3-201ENST00000582370 FKBP1AP62942 108 aaKnown RBP10.88□□□□□ -0.67
PDLIM1P3-201ENST00000582370 LRIT3Q3SXY7 679 aa10.88□□□□□ -0.67
PDLIM1P3-201ENST00000582370 C17orf99Q6UX52 265 aa10.88□□□□□ -0.67
PDLIM1P3-201ENST00000582370 CERS5Q8N5B7 392 aa10.88□□□□□ -0.67
PDLIM1P3-201ENST00000582370 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.88□□□□□ -0.67
PDLIM1P3-201ENST00000582370 MYD88Q99836 296 aa10.88□□□□□ -0.67
PDLIM1P3-201ENST00000582370 GDF15Q99988 308 aa10.88□□□□□ -0.67
PDLIM1P3-201ENST00000582370 ANKRD2Q9GZV1 360 aa10.88□□□□□ -0.67
PDLIM1P3-201ENST00000582370 PHAXQ9H814 394 aaKnown RBP10.88□□□□□ -0.67
PDLIM1P3-201ENST00000582370 CD209Q9NNX6 404 aa10.88□□□□□ -0.67
PDLIM1P3-201ENST00000582370 MAP3K2Q9Y2U5 619 aa10.88□□□□□ -0.67
PDLIM1P3-201ENST00000582370 PCDHAC2Q9Y5I4 1007 aa10.88□□□□□ -0.67
PDLIM1P3-201ENST00000582370 EYSQ5T1H1 3165 aa10.87□□□□□ -0.67
PDLIM1P3-201ENST00000582370 BTBD19C9JJ37 291 aa10.87□□□□□ -0.67
PDLIM1P3-201ENST00000582370 SGPL1O95470 568 aa10.87□□□□□ -0.67
PDLIM1P3-201ENST00000582370 OSBPP22059 807 aa10.87□□□□□ -0.67
PDLIM1P3-201ENST00000582370 KLRK1P26718 216 aa10.87□□□□□ -0.67
PDLIM1P3-201ENST00000582370 IGHMBP2P38935 993 aaKnown RBP10.87□□□□□ -0.67
PDLIM1P3-201ENST00000582370 PSMC4P43686 418 aa10.87□□□□□ -0.67
PDLIM1P3-201ENST00000582370 MAP3K9P80192 1104 aa10.87□□□□□ -0.67
PDLIM1P3-201ENST00000582370 Q7L0L9 218 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms