RNA–Protein interactions for RNA: ENST00000582122.1

TOP3A-212, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-212ENST00000582122 MAP1SQ66K74 1059 aaPredicted RBP12.76□□□□□ -0.37
TOP3A-212ENST00000582122 HHIPL2Q6UWX4 724 aa12.76□□□□□ -0.37
TOP3A-212ENST00000582122 KRT26Q7Z3Y9 468 aa12.76□□□□□ -0.37
TOP3A-212ENST00000582122 AACSQ86V21 672 aa12.76□□□□□ -0.37
TOP3A-212ENST00000582122 TEKT1Q969V4 418 aa12.76□□□□□ -0.37
TOP3A-212ENST00000582122 MXD3Q9BW11 206 aa12.76□□□□□ -0.37
TOP3A-212ENST00000582122 RASSF10A6NK89 507 aa12.75□□□□□ -0.37
TOP3A-212ENST00000582122 WNT10BO00744 389 aa12.75□□□□□ -0.37
TOP3A-212ENST00000582122 SLC34A2O95436 690 aa12.75□□□□□ -0.37
TOP3A-212ENST00000582122 RBM5P52756 815 aaKnown RBP eCLIP12.75□□□□□ -0.37
TOP3A-212ENST00000582122 LBX1P52954 281 aa12.75□□□□□ -0.37
TOP3A-212ENST00000582122 RASGRF1Q13972 1273 aa12.75□□□□□ -0.37
TOP3A-212ENST00000582122 SPATA5Q8NB90 893 aa12.75□□□□□ -0.37
TOP3A-212ENST00000582122 EAF2Q96CJ1 260 aaPredicted RBP12.75□□□□□ -0.37
TOP3A-212ENST00000582122 GCC1Q96CN9 775 aa12.75□□□□□ -0.37
TOP3A-212ENST00000582122 ZBED3Q96IU2 234 aaPredicted RBP12.75□□□□□ -0.37
TOP3A-212ENST00000582122 RWDD1Q9H446 243 aaPredicted RBP12.75□□□□□ -0.37
TOP3A-212ENST00000582122 SHTN1A0MZ66 631 aa12.74□□□□□ -0.37
TOP3A-212ENST00000582122 SPDYE2BA6NHP3 402 aa12.74□□□□□ -0.37
TOP3A-212ENST00000582122 F8W031 263 aaPredicted RBP12.74□□□□□ -0.37
TOP3A-212ENST00000582122 SPDYE6P0CI01 402 aa12.74□□□□□ -0.37
TOP3A-212ENST00000582122 CRKP46108 304 aa12.74□□□□□ -0.37
TOP3A-212ENST00000582122 GSTO1P78417 241 aa12.74□□□□□ -0.37
TOP3A-212ENST00000582122 CFAP100Q494V2 611 aa12.74□□□□□ -0.37
TOP3A-212ENST00000582122 ERICH6Q7L0X2 663 aa12.74□□□□□ -0.37
TOP3A-212ENST00000582122 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.74□□□□□ -0.37
TOP3A-212ENST00000582122 GPATCH3Q96I76 525 aa12.74□□□□□ -0.37
TOP3A-212ENST00000582122 ZDHHC15Q96MV8 337 aa12.74□□□□□ -0.37
TOP3A-212ENST00000582122 DBNDD2Q9BQY9 259 aa12.74□□□□□ -0.37
TOP3A-212ENST00000582122 GGA3Q9NZ52 723 aa12.74□□□□□ -0.37
TOP3A-212ENST00000582122 TMOD2Q9NZR1 351 aa12.74□□□□□ -0.37
TOP3A-212ENST00000582122 DBNLQ9UJU6 430 aaKnown RBP12.74□□□□□ -0.37
TOP3A-212ENST00000582122 JAG2Q9Y219 1238 aa12.74□□□□□ -0.37
TOP3A-212ENST00000582122 PCDHB15Q9Y5E8 787 aa12.74□□□□□ -0.37
TOP3A-212ENST00000582122 PPP2R3BQ9Y5P8 575 aa12.74□□□□□ -0.37
TOP3A-212ENST00000582122 MYH13Q9UKX3 1938 aa12.74□□□□□ -0.37
TOP3A-212ENST00000582122 MAP4K4O95819 1239 aaPredicted RBP12.73□□□□□ -0.37
TOP3A-212ENST00000582122 LDHCP07864 332 aa12.73□□□□□ -0.37
TOP3A-212ENST00000582122 HSPA8P11142 646 aaKnown RBP12.73□□□□□ -0.37
TOP3A-212ENST00000582122 TTF1Q15361 905 aaPredicted RBP12.73□□□□□ -0.37
TOP3A-212ENST00000582122 DEFB115Q30KQ5 88 aa12.73□□□□□ -0.37
TOP3A-212ENST00000582122 ANGEL2Q5VTE6 544 aaKnown RBP12.73□□□□□ -0.37
TOP3A-212ENST00000582122 DZIP1Q86YF9 867 aaKnown RBP12.73□□□□□ -0.37
TOP3A-212ENST00000582122 IL1RAPL2Q9NP60 686 aa12.73□□□□□ -0.37
TOP3A-212ENST00000582122 HMG20BQ9P0W2 317 aa12.73□□□□□ -0.37
TOP3A-212ENST00000582122 ABCF2Q9UG63 623 aa12.73□□□□□ -0.37
TOP3A-212ENST00000582122 ABT1Q9ULW3 272 aaKnown RBP12.73□□□□□ -0.37
TOP3A-212ENST00000582122 ZNF646O15015 1829 aaPredicted RBP12.73□□□□□ -0.37
TOP3A-212ENST00000582122 COL1A1P02452 1464 aaPredicted RBP12.72□□□□□ -0.37
TOP3A-212ENST00000582122 APBB1O00213 710 aa12.72□□□□□ -0.37
TOP3A-212ENST00000582122 EGFRP00533 1210 aa12.72□□□□□ -0.37
TOP3A-212ENST00000582122 CENPBP07199 599 aaPredicted RBP12.72□□□□□ -0.37
TOP3A-212ENST00000582122 NF2P35240 595 aa12.72□□□□□ -0.37
TOP3A-212ENST00000582122 TNNI2P48788 182 aa12.72□□□□□ -0.37
TOP3A-212ENST00000582122 NBPF9Q3BBW0 867 aa12.72□□□□□ -0.37
TOP3A-212ENST00000582122 FKBP1CQ5VVH2 108 aa12.72□□□□□ -0.37
TOP3A-212ENST00000582122 FAM163AQ96GL9 167 aaPredicted RBP12.72□□□□□ -0.37
TOP3A-212ENST00000582122 ABHD8Q96I13 439 aa12.72□□□□□ -0.37
TOP3A-212ENST00000582122 CCDC8Q9H0W5 538 aaPredicted RBP12.72□□□□□ -0.37
TOP3A-212ENST00000582122 LRP2BPQ9P2M1 347 aa12.72□□□□□ -0.37
TOP3A-212ENST00000582122 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.72□□□□□ -0.37
TOP3A-212ENST00000582122 WDR33Q9C0J8 1336 aaKnown RBP12.71□□□□□ -0.37
TOP3A-212ENST00000582122 ECE1P42892 770 aa12.71□□□□□ -0.37
TOP3A-212ENST00000582122 MCAMP43121 646 aa12.71□□□□□ -0.37
TOP3A-212ENST00000582122 FKBP1BP68106 108 aa12.71□□□□□ -0.37
TOP3A-212ENST00000582122 SPDYE2Q495Y8 402 aa12.71□□□□□ -0.37
TOP3A-212ENST00000582122 USP48Q86UV5 1035 aa12.71□□□□□ -0.37
TOP3A-212ENST00000582122 CERS3Q8IU89 383 aa12.71□□□□□ -0.37
TOP3A-212ENST00000582122 HOOK2Q96ED9 719 aa12.71□□□□□ -0.37
TOP3A-212ENST00000582122 BEGAINQ9BUH8 593 aa12.71□□□□□ -0.37
TOP3A-212ENST00000582122 GLIS2Q9BZE0 524 aaPredicted RBP12.71□□□□□ -0.37
TOP3A-212ENST00000582122 THSD7BQ9C0I4 1608 aa12.7□□□□□ -0.38
TOP3A-212ENST00000582122 ATP5JP18859 108 aa12.7□□□□□ -0.38
TOP3A-212ENST00000582122 PRDX5P30044 214 aa12.7□□□□□ -0.38
TOP3A-212ENST00000582122 SUPT20HL1Q3ZLR7 823 aa12.7□□□□□ -0.38
TOP3A-212ENST00000582122 EXOC6Q8TAG9 804 aa12.7□□□□□ -0.38
TOP3A-212ENST00000582122 PRMT6Q96LA8 375 aaPredicted RBP12.7□□□□□ -0.38
TOP3A-212ENST00000582122 NOL10Q9BSC4 688 aaKnown RBP12.7□□□□□ -0.38
TOP3A-212ENST00000582122 ERC2O15083 957 aa12.69□□□□□ -0.38
TOP3A-212ENST00000582122 CELF2O95319 508 aaKnown RBP12.69□□□□□ -0.38
TOP3A-212ENST00000582122 PLCG2P16885 1265 aa12.69□□□□□ -0.38
TOP3A-212ENST00000582122 MAP3K12Q12852 859 aa12.69□□□□□ -0.38
TOP3A-212ENST00000582122 C2orf69Q8N8R5 385 aa12.69□□□□□ -0.38
TOP3A-212ENST00000582122 HHIPL1Q96JK4 782 aa12.69□□□□□ -0.38
TOP3A-212ENST00000582122 DEFB129Q9H1M3 183 aa12.69□□□□□ -0.38
TOP3A-212ENST00000582122 TLR7Q9NYK1 1049 aaKnown RBP12.69□□□□□ -0.38
TOP3A-212ENST00000582122 RAI14Q9P0K7 980 aa12.69□□□□□ -0.38
TOP3A-212ENST00000582122 ZNF70Q9UC06 446 aaPredicted RBP12.69□□□□□ -0.38
TOP3A-212ENST00000582122 GAKO14976 1311 aa12.68□□□□□ -0.38
TOP3A-212ENST00000582122 BAG3O95817 575 aa12.68□□□□□ -0.38
TOP3A-212ENST00000582122 LRRFIP1Q32MZ4 808 aaKnown RBP12.68□□□□□ -0.38
TOP3A-212ENST00000582122 APOBEC3HQ6NTF7 200 aaKnown RBP12.68□□□□□ -0.38
TOP3A-212ENST00000582122 PAXIP1Q6ZW49 1069 aaPredicted RBP12.68□□□□□ -0.38
TOP3A-212ENST00000582122 FAM83AQ86UY5 434 aa12.68□□□□□ -0.38
TOP3A-212ENST00000582122 VEZTQ9HBM0 779 aa12.68□□□□□ -0.38
TOP3A-212ENST00000582122 ECHDC1Q9NTX5 307 aa12.68□□□□□ -0.38
TOP3A-212ENST00000582122 DAGLAQ9Y4D2 1042 aa12.68□□□□□ -0.38
TOP3A-212ENST00000582122 TRPM7Q96QT4 1865 aa12.68□□□□□ -0.38
TOP3A-212ENST00000582122 ECM29Q5VYK3 1845 aa12.67□□□□□ -0.38
TOP3A-212ENST00000582122 MROH7-TTC4A0A0A0MT08 1334 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms