RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 PHKA1P46020 1223 aa24.15■■□□□ 1.46
SREBF1-220ENST00000581707 ATP8B2P98198 1209 aa24.15■■□□□ 1.46
SREBF1-220ENST00000581707 G3BP1Q13283 466 aaKnown RBP eCLIP24.15■■□□□ 1.46
SREBF1-220ENST00000581707 PANK1Q8TE04 598 aa24.15■■□□□ 1.46
SREBF1-220ENST00000581707 C1orf115Q9H7X2 142 aa24.15■■□□□ 1.46
SREBF1-220ENST00000581707 PPP2R3BQ9Y5P8 575 aa24.15■■□□□ 1.46
SREBF1-220ENST00000581707 MS4A1P11836 297 aa24.14■■□□□ 1.45
SREBF1-220ENST00000581707 ADORA1P30542 326 aa24.14■■□□□ 1.45
SREBF1-220ENST00000581707 SPDYE2Q495Y8 402 aa24.14■■□□□ 1.45
SREBF1-220ENST00000581707 TEKT1Q969V4 418 aa24.14■■□□□ 1.45
SREBF1-220ENST00000581707 ZIC5Q96T25 663 aa24.14■■□□□ 1.45
SREBF1-220ENST00000581707 MRIQ9BWK5 157 aa24.14■■□□□ 1.45
SREBF1-220ENST00000581707 TDRD3Q9H7E2 651 aaKnown RBP24.14■■□□□ 1.45
SREBF1-220ENST00000581707 ZNF70Q9UC06 446 aaPredicted RBP24.14■■□□□ 1.45
SREBF1-220ENST00000581707 MAST3O60307 1309 aa24.13■■□□□ 1.45
SREBF1-220ENST00000581707 A0A1B0GUL7 405 aa24.13■■□□□ 1.45
SREBF1-220ENST00000581707 SEMA3EO15041 775 aa24.13■■□□□ 1.45
SREBF1-220ENST00000581707 POLA2Q14181 598 aa24.13■■□□□ 1.45
SREBF1-220ENST00000581707 CCDC102BQ68D86 513 aa24.13■■□□□ 1.45
SREBF1-220ENST00000581707 RCAN3Q9UKA8 241 aa24.13■■□□□ 1.45
SREBF1-220ENST00000581707 SLC10A3P09131 477 aa24.12■■□□□ 1.45
SREBF1-220ENST00000581707 PRKG1Q13976 671 aa24.12■■□□□ 1.45
SREBF1-220ENST00000581707 ARMC9Q7Z3E5 817 aa24.12■■□□□ 1.45
SREBF1-220ENST00000581707 SSH3Q8TE77 659 aa24.12■■□□□ 1.45
SREBF1-220ENST00000581707 XAGE2Q96GT9 111 aa24.12■■□□□ 1.45
SREBF1-220ENST00000581707 DENND2AQ9ULE3 1009 aa24.12■■□□□ 1.45
SREBF1-220ENST00000581707 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.12■■□□□ 1.45
SREBF1-220ENST00000581707 HSPA8P11142 646 aaKnown RBP24.11■■□□□ 1.45
SREBF1-220ENST00000581707 LBX1P52954 281 aa24.11■■□□□ 1.45
SREBF1-220ENST00000581707 TNFAIP1Q13829 316 aa24.11■■□□□ 1.45
SREBF1-220ENST00000581707 RASA3Q14644 834 aa24.11■■□□□ 1.45
SREBF1-220ENST00000581707 ZDHHC15Q96MV8 337 aa24.11■■□□□ 1.45
SREBF1-220ENST00000581707 NEUROD6Q96NK8 337 aa24.11■■□□□ 1.45
SREBF1-220ENST00000581707 PRDM10Q9NQV6 1147 aa24.11■■□□□ 1.45
SREBF1-220ENST00000581707 ZBTB22O15209 634 aa24.1■■□□□ 1.45
SREBF1-220ENST00000581707 KIF23Q02241 960 aaPredicted RBP24.1■■□□□ 1.45
SREBF1-220ENST00000581707 SUPT20HL1Q3ZLR7 823 aa24.1■■□□□ 1.45
SREBF1-220ENST00000581707 RASAL3Q86YV0 1011 aa24.1■■□□□ 1.45
SREBF1-220ENST00000581707 MVPQ14764 893 aaKnown RBP24.09■■□□□ 1.45
SREBF1-220ENST00000581707 NBPF12Q5TAG4 269 aaPredicted RBP24.09■■□□□ 1.45
SREBF1-220ENST00000581707 HHIPL2Q6UWX4 724 aa24.09■■□□□ 1.45
SREBF1-220ENST00000581707 ANGEL1Q9UNK9 670 aaKnown RBP24.09■■□□□ 1.45
SREBF1-220ENST00000581707 CA12O43570 354 aa24.08■■□□□ 1.45
SREBF1-220ENST00000581707 LDHBP07195 334 aaKnown RBP24.08■■□□□ 1.45
SREBF1-220ENST00000581707 OS9Q13438 667 aaPredicted RBP24.08■■□□□ 1.45
SREBF1-220ENST00000581707 IFFO2Q5TF58 517 aa24.08■■□□□ 1.45
SREBF1-220ENST00000581707 SALL1Q9NSC2 1324 aa24.08■■□□□ 1.44
SREBF1-220ENST00000581707 TCP10L2B9ZVM9 353 aa24.07■■□□□ 1.44
SREBF1-220ENST00000581707 PPP1R12BO60237 982 aaPredicted RBP24.07■■□□□ 1.44
SREBF1-220ENST00000581707 SURF6O75683 361 aaKnown RBP24.07■■□□□ 1.44
SREBF1-220ENST00000581707 RASGRF1Q13972 1273 aa24.07■■□□□ 1.44
SREBF1-220ENST00000581707 GORABQ5T7V8 394 aa24.07■■□□□ 1.44
SREBF1-220ENST00000581707 APOBEC3HQ6NTF7 200 aaKnown RBP24.07■■□□□ 1.44
SREBF1-220ENST00000581707 FZD1Q9UP38 647 aa24.07■■□□□ 1.44
SREBF1-220ENST00000581707 PRDX5P30044 214 aa24.06■■□□□ 1.44
SREBF1-220ENST00000581707 TNNI2P48788 182 aa24.06■■□□□ 1.44
SREBF1-220ENST00000581707 LDLRAD1Q5T700 205 aa24.06■■□□□ 1.44
SREBF1-220ENST00000581707 TNS4Q8IZW8 715 aa24.06■■□□□ 1.44
SREBF1-220ENST00000581707 ZGPATQ8N5A5 531 aaKnown RBP24.06■■□□□ 1.44
SREBF1-220ENST00000581707 SSC5DA1L4H1 1573 aa24.06■■□□□ 1.44
SREBF1-220ENST00000581707 CEP85Q6P2H3 762 aa24.05■■□□□ 1.44
SREBF1-220ENST00000581707 TMOD2Q9NZR1 351 aa24.05■■□□□ 1.44
SREBF1-220ENST00000581707 TSKSQ9UJT2 592 aa24.05■■□□□ 1.44
SREBF1-220ENST00000581707 NOP58Q9Y2X3 529 aaKnown RBP24.05■■□□□ 1.44
SREBF1-220ENST00000581707 PDS5AQ29RF7 1337 aaKnown RBP24.05■■□□□ 1.44
SREBF1-220ENST00000581707 CACNB3P54284 484 aa24.04■■□□□ 1.44
SREBF1-220ENST00000581707 DIXDC1Q155Q3 683 aa24.04■■□□□ 1.44
SREBF1-220ENST00000581707 MAP3K11Q16584 847 aa24.04■■□□□ 1.44
SREBF1-220ENST00000581707 REM2Q8IYK8 340 aaPredicted RBP24.04■■□□□ 1.44
SREBF1-220ENST00000581707 CSRNP1Q96S65 589 aa24.04■■□□□ 1.44
SREBF1-220ENST00000581707 TMEM39BQ9GZU3 492 aa24.04■■□□□ 1.44
SREBF1-220ENST00000581707 GPR108Q9NPR9 543 aa24.04■■□□□ 1.44
SREBF1-220ENST00000581707 COG6Q9Y2V7 657 aa24.04■■□□□ 1.44
SREBF1-220ENST00000581707 TEPSINQ96N21 525 aa24.03■■□□□ 1.44
SREBF1-220ENST00000581707 DDX19BQ9UMR2 479 aa24.03■■□□□ 1.44
SREBF1-220ENST00000581707 DAGLAQ9Y4D2 1042 aa24.03■■□□□ 1.44
SREBF1-220ENST00000581707 AKAP11Q9UKA4 1901 aa24.02■■□□□ 1.44
SREBF1-220ENST00000581707 TNNI3KQ59H18 835 aa24.02■■□□□ 1.44
SREBF1-220ENST00000581707 FKBP1CQ5VVH2 108 aa24.02■■□□□ 1.44
SREBF1-220ENST00000581707 ABCF2Q9UG63 623 aa24.02■■□□□ 1.44
SREBF1-220ENST00000581707 FPGT-TNNI3KV9GXZ4 949 aa24.02■■□□□ 1.44
SREBF1-220ENST00000581707 USP2O75604 605 aaPredicted RBP24.01■■□□□ 1.43
SREBF1-220ENST00000581707 IREB2P48200 963 aaKnown RBP24.01■■□□□ 1.43
SREBF1-220ENST00000581707 SPTY2D1Q68D10 685 aaPredicted RBP24.01■■□□□ 1.43
SREBF1-220ENST00000581707 CDAN1Q8IWY9 1227 aa24.01■■□□□ 1.43
SREBF1-220ENST00000581707 SLC10A4Q96EP9 437 aa24.01■■□□□ 1.43
SREBF1-220ENST00000581707 HMG20BQ9P0W2 317 aa24.01■■□□□ 1.43
SREBF1-220ENST00000581707 UNCXA6NJT0 531 aa24■■□□□ 1.43
SREBF1-220ENST00000581707 ARID4AP29374 1257 aaPredicted RBP24■■□□□ 1.43
SREBF1-220ENST00000581707 FAM83AQ86UY5 434 aa24■■□□□ 1.43
SREBF1-220ENST00000581707 SPATA5Q8NB90 893 aa24■■□□□ 1.43
SREBF1-220ENST00000581707 MYH2Q9UKX2 1941 aa24■■□□□ 1.43
SREBF1-220ENST00000581707 UQCRFS1P1P0C7P4 283 aa23.99■■□□□ 1.43
SREBF1-220ENST00000581707 MKRN3Q13064 507 aaKnown RBP23.99■■□□□ 1.43
SREBF1-220ENST00000581707 CDC42EP5Q6NZY7 148 aa23.99■■□□□ 1.43
SREBF1-220ENST00000581707 DZIP1Q86YF9 867 aaKnown RBP23.99■■□□□ 1.43
SREBF1-220ENST00000581707 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.99■■□□□ 1.43
SREBF1-220ENST00000581707 CLMNQ96JQ2 1002 aa23.99■■□□□ 1.43
SREBF1-220ENST00000581707 CHMP4BQ9H444 224 aaKnown RBP23.99■■□□□ 1.43
SREBF1-220ENST00000581707 ZBTB40Q9NUA8 1239 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms