RNA–Protein interactions for RNA: ENST00000580997.1

SENP3-204, Transcript of SUMO specific peptidase 3, humanhuman

TSL 2

Gene SENP3, Length 679 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-204ENST00000580997 ANGEL1Q9UNK9 670 aaKnown RBP15.6■□□□□ 0.09
SENP3-204ENST00000580997 HDAC5Q9UQL6 1122 aa15.6■□□□□ 0.09
SENP3-204ENST00000580997 SSC5DA1L4H1 1573 aa15.59■□□□□ 0.09
SENP3-204ENST00000580997 CIAO1O76071 339 aa15.59■□□□□ 0.09
SENP3-204ENST00000580997 IFIT1P09914 478 aaKnown RBP15.59■□□□□ 0.09
SENP3-204ENST00000580997 PRKG1Q13976 671 aa15.59■□□□□ 0.09
SENP3-204ENST00000580997 RASA3Q14644 834 aa15.59■□□□□ 0.09
SENP3-204ENST00000580997 GRIK5Q16478 980 aa15.59■□□□□ 0.09
SENP3-204ENST00000580997 SPDYE2Q495Y8 402 aa15.59■□□□□ 0.09
SENP3-204ENST00000580997 INTS3Q68E01 1043 aaKnown RBP15.59■□□□□ 0.09
SENP3-204ENST00000580997 DZIP1LQ8IYY4 767 aaKnown RBP15.59■□□□□ 0.09
SENP3-204ENST00000580997 LPIN2Q92539 896 aa15.59■□□□□ 0.09
SENP3-204ENST00000580997 MCOLN1Q9GZU1 580 aa15.59■□□□□ 0.09
SENP3-204ENST00000580997 IQSEC3Q9UPP2 1182 aaPredicted RBP15.59■□□□□ 0.09
SENP3-204ENST00000580997 PPP1R12BO60237 982 aaPredicted RBP15.58■□□□□ 0.08
SENP3-204ENST00000580997 CRKP46108 304 aa15.58■□□□□ 0.08
SENP3-204ENST00000580997 TNFAIP1Q13829 316 aa15.58■□□□□ 0.08
SENP3-204ENST00000580997 NBPF12Q5TAG4 269 aaPredicted RBP15.58■□□□□ 0.08
SENP3-204ENST00000580997 SPRYD7Q5W111 196 aa15.58■□□□□ 0.08
SENP3-204ENST00000580997 TDRD3Q9H7E2 651 aaKnown RBP15.58■□□□□ 0.08
SENP3-204ENST00000580997 VEZTQ9HBM0 779 aa15.58■□□□□ 0.08
SENP3-204ENST00000580997 ZNF70Q9UC06 446 aaPredicted RBP15.58■□□□□ 0.08
SENP3-204ENST00000580997 FZD1Q9UP38 647 aa15.58■□□□□ 0.08
SENP3-204ENST00000580997 SUGT1Q9Y2Z0 365 aa15.58■□□□□ 0.08
SENP3-204ENST00000580997 ECM29Q5VYK3 1845 aa15.57■□□□□ 0.08
SENP3-204ENST00000580997 CASP8AP2Q9UKL3 1982 aa15.57■□□□□ 0.08
SENP3-204ENST00000580997 FRAT2O75474 233 aaPredicted RBP15.57■□□□□ 0.08
SENP3-204ENST00000580997 USP2O75604 605 aaPredicted RBP15.57■□□□□ 0.08
SENP3-204ENST00000580997 CFHR5Q9BXR6 569 aa15.57■□□□□ 0.08
SENP3-204ENST00000580997 LRRFIP2Q9Y608 721 aaKnown RBP15.57■□□□□ 0.08
SENP3-204ENST00000580997 ZBTB22O15209 634 aa15.56■□□□□ 0.08
SENP3-204ENST00000580997 ZBTB48P10074 688 aaPredicted RBP15.56■□□□□ 0.08
SENP3-204ENST00000580997 SLC5A1P13866 664 aa15.56■□□□□ 0.08
SENP3-204ENST00000580997 SREBF2Q12772 1141 aa15.56■□□□□ 0.08
SENP3-204ENST00000580997 CHAF1AQ13111 956 aaPredicted RBP15.56■□□□□ 0.08
SENP3-204ENST00000580997 DGKZQ13574 1117 aa15.56■□□□□ 0.08
SENP3-204ENST00000580997 NOM1Q5C9Z4 860 aaKnown RBP15.56■□□□□ 0.08
SENP3-204ENST00000580997 SLC10A4Q96EP9 437 aa15.56■□□□□ 0.08
SENP3-204ENST00000580997 ZDHHC15Q96MV8 337 aa15.56■□□□□ 0.08
SENP3-204ENST00000580997 TEPSINQ96N21 525 aa15.56■□□□□ 0.08
SENP3-204ENST00000580997 MEIS3Q99687 375 aa15.56■□□□□ 0.08
SENP3-204ENST00000580997 COPRSQ9NQ92 184 aa15.56■□□□□ 0.08
SENP3-204ENST00000580997 AKAP11Q9UKA4 1901 aa15.55■□□□□ 0.08
SENP3-204ENST00000580997 ARAP2Q8WZ64 1704 aa15.55■□□□□ 0.08
SENP3-204ENST00000580997 IPO8O15397 1037 aaKnown RBP15.55■□□□□ 0.08
SENP3-204ENST00000580997 IL15P40933 162 aaPredicted RBP15.55■□□□□ 0.08
SENP3-204ENST00000580997 INHBEP58166 350 aa15.55■□□□□ 0.08
SENP3-204ENST00000580997 TEKT1Q969V4 418 aa15.55■□□□□ 0.08
SENP3-204ENST00000580997 CEP126Q9P2H0 1117 aa15.55■□□□□ 0.08
SENP3-204ENST00000580997 GNAI3P08754 354 aa15.54■□□□□ 0.08
SENP3-204ENST00000580997 TRIM27P14373 513 aa15.54■□□□□ 0.08
SENP3-204ENST00000580997 IREB2P48200 963 aaKnown RBP15.54■□□□□ 0.08
SENP3-204ENST00000580997 MTX1Q13505 466 aa15.54■□□□□ 0.08
SENP3-204ENST00000580997 APOBEC3HQ6NTF7 200 aaKnown RBP15.54■□□□□ 0.08
SENP3-204ENST00000580997 HHIPL2Q6UWX4 724 aa15.54■□□□□ 0.08
SENP3-204ENST00000580997 WDR66Q8TBY9 1149 aa15.54■□□□□ 0.08
SENP3-204ENST00000580997 CLMNQ96JQ2 1002 aa15.54■□□□□ 0.08
SENP3-204ENST00000580997 SIL1Q9H173 461 aa15.54■□□□□ 0.08
SENP3-204ENST00000580997 MAST3O60307 1309 aa15.53■□□□□ 0.08
SENP3-204ENST00000580997 MANSC4A6NHS7 340 aaPredicted RBP15.53■□□□□ 0.08
SENP3-204ENST00000580997 CCDC85CA6NKD9 419 aa15.53■□□□□ 0.08
SENP3-204ENST00000580997 BCAR3O75815 825 aa15.53■□□□□ 0.08
SENP3-204ENST00000580997 TBC1D8O95759 1140 aa15.53■□□□□ 0.08
SENP3-204ENST00000580997 TNNI2P48788 182 aa15.53■□□□□ 0.08
SENP3-204ENST00000580997 RGS19P49795 217 aa15.53■□□□□ 0.08
SENP3-204ENST00000580997 MKRN3Q13064 507 aaKnown RBP15.53■□□□□ 0.08
SENP3-204ENST00000580997 ATP2B3Q16720 1220 aa15.53■□□□□ 0.08
SENP3-204ENST00000580997 FKBP1CQ5VVH2 108 aa15.53■□□□□ 0.08
SENP3-204ENST00000580997 ANKRD13AQ8IZ07 590 aa15.53■□□□□ 0.08
SENP3-204ENST00000580997 MIER1Q8N108 512 aa15.53■□□□□ 0.08
SENP3-204ENST00000580997 TMEM39BQ9GZU3 492 aa15.53■□□□□ 0.08
SENP3-204ENST00000580997 TCP10L2B9ZVM9 353 aa15.52■□□□□ 0.08
SENP3-204ENST00000580997 GABBR2O75899 941 aa15.52■□□□□ 0.08
SENP3-204ENST00000580997 ALDH1A1P00352 501 aa15.52■□□□□ 0.08
SENP3-204ENST00000580997 ATF7IPQ6VMQ6 1270 aa15.52■□□□□ 0.08
SENP3-204ENST00000580997 CTU1Q7Z7A3 348 aaKnown RBP15.52■□□□□ 0.08
SENP3-204ENST00000580997 FAM83AQ86UY5 434 aa15.52■□□□□ 0.08
SENP3-204ENST00000580997 CDAN1Q8IWY9 1227 aa15.52■□□□□ 0.08
SENP3-204ENST00000580997 WNK4Q96J92 1243 aa15.52■□□□□ 0.08
SENP3-204ENST00000580997 PA2G4Q9UQ80 394 aaKnown RBP15.52■□□□□ 0.08
SENP3-204ENST00000580997 GPR25O00155 361 aa15.51■□□□□ 0.07
SENP3-204ENST00000580997 SEMA3EO15041 775 aa15.51■□□□□ 0.07
SENP3-204ENST00000580997 IFNL1Q8IU54 200 aa15.51■□□□□ 0.07
SENP3-204ENST00000580997 ZNF296Q8WUU4 475 aaPredicted RBP15.51■□□□□ 0.07
SENP3-204ENST00000580997 GNL3LQ9NVN8 582 aaKnown RBP15.51■□□□□ 0.07
SENP3-204ENST00000580997 SALL1Q9NSC2 1324 aa15.5■□□□□ 0.07
SENP3-204ENST00000580997 TESPA1A2RU30 521 aaPredicted RBP15.5■□□□□ 0.07
SENP3-204ENST00000580997 SRGAP3O43295 1099 aa15.5■□□□□ 0.07
SENP3-204ENST00000580997 GJA5P36382 358 aa15.5■□□□□ 0.07
SENP3-204ENST00000580997 DIEXFQ68CQ4 756 aaKnown RBP15.5■□□□□ 0.07
SENP3-204ENST00000580997 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.5■□□□□ 0.07
SENP3-204ENST00000580997 PHKA1P46020 1223 aa15.49■□□□□ 0.07
SENP3-204ENST00000580997 CACNB3P54284 484 aa15.49■□□□□ 0.07
SENP3-204ENST00000580997 MAP3K9P80192 1104 aa15.49■□□□□ 0.07
SENP3-204ENST00000580997 PKN2Q16513 984 aaKnown RBP15.49■□□□□ 0.07
SENP3-204ENST00000580997 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.49■□□□□ 0.07
SENP3-204ENST00000580997 FRAT1Q92837 279 aaPredicted RBP15.49■□□□□ 0.07
SENP3-204ENST00000580997 R3HDMLQ9H3Y0 253 aa15.49■□□□□ 0.07
SENP3-204ENST00000580997 DENND2AQ9ULE3 1009 aa15.49■□□□□ 0.07
SENP3-204ENST00000580997 TNNQ9UQP3 1299 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms