RNA–Protein interactions for RNA: ENST00000580799.2

GGA3-210, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-210ENST00000580799 TBC1D22AQ8WUA7 517 aa12.96□□□□□ -0.33
GGA3-210ENST00000580799 GCC1Q96CN9 775 aa12.96□□□□□ -0.33
GGA3-210ENST00000580799 KAZALD1Q96I82 304 aa12.96□□□□□ -0.33
GGA3-210ENST00000580799 TEPSINQ96N21 525 aa12.96□□□□□ -0.33
GGA3-210ENST00000580799 PUS3Q9BZE2 481 aaKnown RBP12.96□□□□□ -0.33
GGA3-210ENST00000580799 ELP3Q9H9T3 547 aa12.96□□□□□ -0.33
GGA3-210ENST00000580799 NBPF7P0C2Y1 421 aaPredicted RBP12.95□□□□□ -0.34
GGA3-210ENST00000580799 ARHGEF6Q15052 776 aa12.95□□□□□ -0.34
GGA3-210ENST00000580799 RABL6Q3YEC7 729 aaPredicted RBP12.95□□□□□ -0.34
GGA3-210ENST00000580799 CAVIN4Q5BKX8 364 aa12.95□□□□□ -0.34
GGA3-210ENST00000580799 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.95□□□□□ -0.34
GGA3-210ENST00000580799 FBXO33Q7Z6M2 555 aa12.95□□□□□ -0.34
GGA3-210ENST00000580799 CD99L2Q8TCZ2 262 aa12.95□□□□□ -0.34
GGA3-210ENST00000580799 SUCLG2Q96I99 432 aa12.95□□□□□ -0.34
GGA3-210ENST00000580799 MS4A4AQ96JQ5 239 aa12.95□□□□□ -0.34
GGA3-210ENST00000580799 PTPN18Q99952 460 aa12.95□□□□□ -0.34
GGA3-210ENST00000580799 EFCC1Q9HA90 598 aa12.95□□□□□ -0.34
GGA3-210ENST00000580799 CSADQ9Y600 493 aa12.95□□□□□ -0.34
GGA3-210ENST00000580799 TCP10L2B9ZVM9 353 aa12.94□□□□□ -0.34
GGA3-210ENST00000580799 FRAT2O75474 233 aaPredicted RBP12.94□□□□□ -0.34
GGA3-210ENST00000580799 WDHD1O75717 1129 aaPredicted RBP12.94□□□□□ -0.34
GGA3-210ENST00000580799 GTF2A2P52657 109 aa12.94□□□□□ -0.34
GGA3-210ENST00000580799 MAP3K9P80192 1104 aa12.94□□□□□ -0.34
GGA3-210ENST00000580799 VGLL4Q14135 290 aa12.94□□□□□ -0.34
GGA3-210ENST00000580799 TEKT1Q969V4 418 aa12.94□□□□□ -0.34
GGA3-210ENST00000580799 ARMC5Q96C12 935 aa12.94□□□□□ -0.34
GGA3-210ENST00000580799 HOOK2Q96ED9 719 aa12.94□□□□□ -0.34
GGA3-210ENST00000580799 MRIQ9BWK5 157 aa12.94□□□□□ -0.34
GGA3-210ENST00000580799 TMEM39BQ9GZU3 492 aa12.94□□□□□ -0.34
GGA3-210ENST00000580799 BICC1Q9H694 974 aaKnown RBP12.94□□□□□ -0.34
GGA3-210ENST00000580799 MAST3O60307 1309 aa12.93□□□□□ -0.34
GGA3-210ENST00000580799 KIF16BQ96L93 1317 aa12.93□□□□□ -0.34
GGA3-210ENST00000580799 CCL15-CCL14A0A0B4J2E2 113 aa12.93□□□□□ -0.34
GGA3-210ENST00000580799 PDE8BO95263 885 aa12.93□□□□□ -0.34
GGA3-210ENST00000580799 CCL15Q16663 113 aa12.93□□□□□ -0.34
GGA3-210ENST00000580799 METTL24Q5JXM2 366 aa12.93□□□□□ -0.34
GGA3-210ENST00000580799 FKBP1CQ5VVH2 108 aa12.93□□□□□ -0.34
GGA3-210ENST00000580799 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.93□□□□□ -0.34
GGA3-210ENST00000580799 ZFYVE28Q9HCC9 887 aa12.93□□□□□ -0.34
GGA3-210ENST00000580799 TMOD2Q9NZR1 351 aa12.93□□□□□ -0.34
GGA3-210ENST00000580799 SUGT1Q9Y2Z0 365 aa12.93□□□□□ -0.34
GGA3-210ENST00000580799 HTTP42858 3142 aa12.93□□□□□ -0.34
GGA3-210ENST00000580799 PTPRCP08575 1304 aa12.92□□□□□ -0.34
GGA3-210ENST00000580799 POTEFA5A3E0 1075 aa12.92□□□□□ -0.34
GGA3-210ENST00000580799 SPDYE5A6NIY4 337 aa12.92□□□□□ -0.34
GGA3-210ENST00000580799 TAF1CQ15572 869 aaPredicted RBP12.92□□□□□ -0.34
GGA3-210ENST00000580799 FAM83AQ86UY5 434 aa12.92□□□□□ -0.34
GGA3-210ENST00000580799 CDAN1Q8IWY9 1227 aa12.92□□□□□ -0.34
GGA3-210ENST00000580799 VGLL2Q8N8G2 317 aa12.92□□□□□ -0.34
GGA3-210ENST00000580799 BRI3BPQ8WY22 251 aa12.92□□□□□ -0.34
GGA3-210ENST00000580799 OTUD5Q96G74 571 aa12.92□□□□□ -0.34
GGA3-210ENST00000580799 ZDHHC15Q96MV8 337 aa12.92□□□□□ -0.34
GGA3-210ENST00000580799 ZCCHC17Q9NP64 241 aaKnown RBP12.92□□□□□ -0.34
GGA3-210ENST00000580799 IQSEC3Q9UPP2 1182 aaPredicted RBP12.92□□□□□ -0.34
GGA3-210ENST00000580799 CETPP11597 493 aa12.91□□□□□ -0.34
GGA3-210ENST00000580799 CHAF1AQ13111 956 aaPredicted RBP12.91□□□□□ -0.34
GGA3-210ENST00000580799 GRIK5Q16478 980 aa12.91□□□□□ -0.34
GGA3-210ENST00000580799 LRRC24Q50LG9 513 aa12.91□□□□□ -0.34
GGA3-210ENST00000580799 NBPF11Q86T75 865 aa12.91□□□□□ -0.34
GGA3-210ENST00000580799 ERO1BQ86YB8 467 aa12.91□□□□□ -0.34
GGA3-210ENST00000580799 FAM9BQ8IZU0 186 aa12.91□□□□□ -0.34
GGA3-210ENST00000580799 ANKRD44Q8N8A2 993 aa12.91□□□□□ -0.34
GGA3-210ENST00000580799 CNKSR2Q8WXI2 1034 aa12.91□□□□□ -0.34
GGA3-210ENST00000580799 MYH13Q9UKX3 1938 aa12.91□□□□□ -0.34
GGA3-210ENST00000580799 RPAP1Q9BWH6 1393 aaPredicted RBP12.91□□□□□ -0.34
GGA3-210ENST00000580799 ZNF521Q96K83 1311 aa12.9□□□□□ -0.34
GGA3-210ENST00000580799 IFIT1P09914 478 aaKnown RBP12.9□□□□□ -0.34
GGA3-210ENST00000580799 PUM3Q15397 648 aaKnown RBP12.9□□□□□ -0.34
GGA3-210ENST00000580799 DCAF15Q66K64 600 aa12.9□□□□□ -0.34
GGA3-210ENST00000580799 HHIPL2Q6UWX4 724 aa12.9□□□□□ -0.34
GGA3-210ENST00000580799 MRPL50Q8N5N7 158 aaKnown RBP12.9□□□□□ -0.34
GGA3-210ENST00000580799 TMEM106CQ9BVX2 250 aa12.9□□□□□ -0.34
GGA3-210ENST00000580799 GNRH1P01148 92 aa12.89□□□□□ -0.35
GGA3-210ENST00000580799 BCAMP50895 628 aa12.89□□□□□ -0.35
GGA3-210ENST00000580799 CACNB3P54284 484 aa12.89□□□□□ -0.35
GGA3-210ENST00000580799 SNAPC2Q13487 334 aa12.89□□□□□ -0.35
GGA3-210ENST00000580799 SLC9C1Q4G0N8 1177 aa12.89□□□□□ -0.35
GGA3-210ENST00000580799 APOBEC3HQ6NTF7 200 aaKnown RBP12.89□□□□□ -0.35
GGA3-210ENST00000580799 FAM43AQ8N2R8 423 aa12.89□□□□□ -0.35
GGA3-210ENST00000580799 ZNF333Q96JL9 665 aa12.89□□□□□ -0.35
GGA3-210ENST00000580799 WRNIP1Q96S55 665 aa12.89□□□□□ -0.35
GGA3-210ENST00000580799 SNCAIPQ9Y6H5 919 aa12.89□□□□□ -0.35
GGA3-210ENST00000580799 ZNF316A6NFI3 1004 aaPredicted RBP12.88□□□□□ -0.35
GGA3-210ENST00000580799 TLR2O60603 784 aa12.88□□□□□ -0.35
GGA3-210ENST00000580799 FGFR2P21802 821 aa12.88□□□□□ -0.35
GGA3-210ENST00000580799 CAP1Q01518 475 aa12.88□□□□□ -0.35
GGA3-210ENST00000580799 PPIL2Q13356 520 aa12.88□□□□□ -0.35
GGA3-210ENST00000580799 KIF22Q14807 665 aa12.88□□□□□ -0.35
GGA3-210ENST00000580799 WDR66Q8TBY9 1149 aa12.88□□□□□ -0.35
GGA3-210ENST00000580799 USP44Q9H0E7 712 aa12.88□□□□□ -0.35
GGA3-210ENST00000580799 EYA2O00167 538 aa12.87□□□□□ -0.35
GGA3-210ENST00000580799 SLC5A1P13866 664 aa12.87□□□□□ -0.35
GGA3-210ENST00000580799 EN2P19622 333 aaPredicted RBP12.87□□□□□ -0.35
GGA3-210ENST00000580799 ZEB1P37275 1124 aaPredicted RBP12.87□□□□□ -0.35
GGA3-210ENST00000580799 PRMT2P55345 433 aa12.87□□□□□ -0.35
GGA3-210ENST00000580799 KLHDC4Q8TBB5 520 aa12.87□□□□□ -0.35
GGA3-210ENST00000580799 LPIN2Q92539 896 aa12.87□□□□□ -0.35
GGA3-210ENST00000580799 ZKSCAN4Q969J2 545 aaPredicted RBP12.87□□□□□ -0.35
GGA3-210ENST00000580799 ZNF341Q9BYN7 854 aa12.87□□□□□ -0.35
GGA3-210ENST00000580799 PTCH2Q9Y6C5 1203 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms