RNA–Protein interactions for RNA: ENST00000580784.5

CSNK1D-215, Transcript of casein kinase 1 delta, humanhuman

TSL 1 (best)

Gene CSNK1D, Length 1,081 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-215ENST00000580784 MKRN3Q13064 507 aaKnown RBP26.55■■□□□ 1.84
CSNK1D-215ENST00000580784 SPDYE2Q495Y8 402 aa26.55■■□□□ 1.84
CSNK1D-215ENST00000580784 NBPF12Q5TAG4 269 aaPredicted RBP26.55■■□□□ 1.84
CSNK1D-215ENST00000580784 FRAT1Q92837 279 aaPredicted RBP26.55■■□□□ 1.84
CSNK1D-215ENST00000580784 FBXO3Q9UK99 471 aa26.55■■□□□ 1.84
CSNK1D-215ENST00000580784 PA2G4Q9UQ80 394 aaKnown RBP26.55■■□□□ 1.84
CSNK1D-215ENST00000580784 MYH13Q9UKX3 1938 aa26.55■■□□□ 1.84
CSNK1D-215ENST00000580784 TRIM27P14373 513 aa26.54■■□□□ 1.84
CSNK1D-215ENST00000580784 SUPT20HL1Q3ZLR7 823 aa26.54■■□□□ 1.84
CSNK1D-215ENST00000580784 CEP126Q9P2H0 1117 aa26.54■■□□□ 1.84
CSNK1D-215ENST00000580784 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.53■■□□□ 1.84
CSNK1D-215ENST00000580784 PPP1R12BO60237 982 aaPredicted RBP26.52■■□□□ 1.84
CSNK1D-215ENST00000580784 GNAI3P08754 354 aa26.52■■□□□ 1.84
CSNK1D-215ENST00000580784 MAP3K11Q16584 847 aa26.52■■□□□ 1.84
CSNK1D-215ENST00000580784 ATP2B3Q16720 1220 aa26.52■■□□□ 1.84
CSNK1D-215ENST00000580784 ATF7IPQ6VMQ6 1270 aa26.52■■□□□ 1.84
CSNK1D-215ENST00000580784 COPRSQ9NQ92 184 aa26.52■■□□□ 1.84
CSNK1D-215ENST00000580784 IL15P40933 162 aaPredicted RBP26.51■■□□□ 1.83
CSNK1D-215ENST00000580784 HDLBPQ00341 1268 aaKnown RBP26.51■■□□□ 1.83
CSNK1D-215ENST00000580784 CLUAP1Q96AJ1 413 aa26.51■■□□□ 1.83
CSNK1D-215ENST00000580784 TCP10L2B9ZVM9 353 aa26.5■■□□□ 1.83
CSNK1D-215ENST00000580784 TM4SF4P48230 202 aa26.5■■□□□ 1.83
CSNK1D-215ENST00000580784 TNFAIP1Q13829 316 aa26.5■■□□□ 1.83
CSNK1D-215ENST00000580784 TEKT1Q969V4 418 aa26.5■■□□□ 1.83
CSNK1D-215ENST00000580784 SLC10A4Q96EP9 437 aa26.5■■□□□ 1.83
CSNK1D-215ENST00000580784 CLMNQ96JQ2 1002 aa26.5■■□□□ 1.83
CSNK1D-215ENST00000580784 MCOLN1Q9GZU1 580 aa26.5■■□□□ 1.83
CSNK1D-215ENST00000580784 USP2O75604 605 aaPredicted RBP26.49■■□□□ 1.83
CSNK1D-215ENST00000580784 SPRYD7Q5W111 196 aa26.49■■□□□ 1.83
CSNK1D-215ENST00000580784 SRGAP3O43295 1099 aa26.48■■□□□ 1.83
CSNK1D-215ENST00000580784 DGKZQ13574 1117 aa26.48■■□□□ 1.83
CSNK1D-215ENST00000580784 MRIQ9BWK5 157 aa26.48■■□□□ 1.83
CSNK1D-215ENST00000580784 SUGT1Q9Y2Z0 365 aa26.48■■□□□ 1.83
CSNK1D-215ENST00000580784 CDAN1Q8IWY9 1227 aa26.47■■□□□ 1.83
CSNK1D-215ENST00000580784 WDR66Q8TBY9 1149 aa26.47■■□□□ 1.83
CSNK1D-215ENST00000580784 ZDHHC15Q96MV8 337 aa26.47■■□□□ 1.83
CSNK1D-215ENST00000580784 TEPSINQ96N21 525 aa26.47■■□□□ 1.83
CSNK1D-215ENST00000580784 TMEM39BQ9GZU3 492 aa26.47■■□□□ 1.83
CSNK1D-215ENST00000580784 TBC1D8O95759 1140 aa26.46■■□□□ 1.83
CSNK1D-215ENST00000580784 CACNB3P54284 484 aa26.46■■□□□ 1.83
CSNK1D-215ENST00000580784 MTX1Q13505 466 aa26.46■■□□□ 1.83
CSNK1D-215ENST00000580784 MAST3O60307 1309 aa26.45■■□□□ 1.83
CSNK1D-215ENST00000580784 IREB2P48200 963 aaKnown RBP26.45■■□□□ 1.82
CSNK1D-215ENST00000580784 TNNI2P48788 182 aa26.45■■□□□ 1.82
CSNK1D-215ENST00000580784 SREBF2Q12772 1141 aa26.45■■□□□ 1.82
CSNK1D-215ENST00000580784 ZKSCAN2Q63HK3 967 aa26.45■■□□□ 1.82
CSNK1D-215ENST00000580784 APOBEC3HQ6NTF7 200 aaKnown RBP26.45■■□□□ 1.82
CSNK1D-215ENST00000580784 GNL3LQ9NVN8 582 aaKnown RBP26.45■■□□□ 1.82
CSNK1D-215ENST00000580784 UNCXA6NJT0 531 aa26.44■■□□□ 1.82
CSNK1D-215ENST00000580784 CCDC85CA6NKD9 419 aa26.44■■□□□ 1.82
CSNK1D-215ENST00000580784 GNAI2P04899 355 aa26.44■■□□□ 1.82
CSNK1D-215ENST00000580784 ADORA1P30542 326 aa26.44■■□□□ 1.82
CSNK1D-215ENST00000580784 PHKA1P46020 1223 aa26.44■■□□□ 1.82
CSNK1D-215ENST00000580784 TIMM10P62072 90 aa26.44■■□□□ 1.82
CSNK1D-215ENST00000580784 HHIPL2Q6UWX4 724 aa26.44■■□□□ 1.82
CSNK1D-215ENST00000580784 TMEM57Q8N5G2 664 aa26.43■■□□□ 1.82
CSNK1D-215ENST00000580784 WNK4Q96J92 1243 aa26.43■■□□□ 1.82
CSNK1D-215ENST00000580784 TFCP2Q12800 502 aa26.42■■□□□ 1.82
CSNK1D-215ENST00000580784 ANKRD13AQ8IZ07 590 aa26.42■■□□□ 1.82
CSNK1D-215ENST00000580784 OTOFQ9HC10 1997 aa26.42■■□□□ 1.82
CSNK1D-215ENST00000580784 ZBTB48P10074 688 aaPredicted RBP26.41■■□□□ 1.82
CSNK1D-215ENST00000580784 PRDX5P30044 214 aa26.41■■□□□ 1.82
CSNK1D-215ENST00000580784 CCDC102BQ68D86 513 aa26.41■■□□□ 1.82
CSNK1D-215ENST00000580784 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26.41■■□□□ 1.82
CSNK1D-215ENST00000580784 MANSC4A6NHS7 340 aaPredicted RBP26.4■■□□□ 1.82
CSNK1D-215ENST00000580784 DIXDC1Q155Q3 683 aa26.4■■□□□ 1.82
CSNK1D-215ENST00000580784 TMOD2Q9NZR1 351 aa26.4■■□□□ 1.82
CSNK1D-215ENST00000580784 DENND2AQ9ULE3 1009 aa26.4■■□□□ 1.82
CSNK1D-215ENST00000580784 PNMA6EA0A0J9YXQ4 647 aa26.39■■□□□ 1.82
CSNK1D-215ENST00000580784 SEMA3EO15041 775 aa26.39■■□□□ 1.82
CSNK1D-215ENST00000580784 GJA5P36382 358 aa26.39■■□□□ 1.82
CSNK1D-215ENST00000580784 INHBEP58166 350 aa26.39■■□□□ 1.82
CSNK1D-215ENST00000580784 LAMB1P07942 1786 aa26.38■■□□□ 1.81
CSNK1D-215ENST00000580784 A0A1B0GUL7 405 aa26.38■■□□□ 1.81
CSNK1D-215ENST00000580784 LDHBP07195 334 aaKnown RBP26.38■■□□□ 1.81
CSNK1D-215ENST00000580784 FKBP1CQ5VVH2 108 aa26.38■■□□□ 1.81
CSNK1D-215ENST00000580784 FAM83AQ86UY5 434 aa26.38■■□□□ 1.81
CSNK1D-215ENST00000580784 ZNF296Q8WUU4 475 aaPredicted RBP26.38■■□□□ 1.81
CSNK1D-215ENST00000580784 R3HDMLQ9H3Y0 253 aa26.38■■□□□ 1.81
CSNK1D-215ENST00000580784 ELP3Q9H9T3 547 aa26.38■■□□□ 1.81
CSNK1D-215ENST00000580784 AKAP2Q9Y2D5 859 aa26.38■■□□□ 1.81
CSNK1D-215ENST00000580784 DAGLAQ9Y4D2 1042 aa26.38■■□□□ 1.81
CSNK1D-215ENST00000580784 SALL1Q9NSC2 1324 aa26.38■■□□□ 1.81
CSNK1D-215ENST00000580784 PPP1R3FQ6ZSY5 799 aaPredicted RBP26.37■■□□□ 1.81
CSNK1D-215ENST00000580784 IFNL1Q8IU54 200 aa26.37■■□□□ 1.81
CSNK1D-215ENST00000580784 XAGE2Q96GT9 111 aa26.37■■□□□ 1.81
CSNK1D-215ENST00000580784 GPR25O00155 361 aa26.36■■□□□ 1.81
CSNK1D-215ENST00000580784 MAP3K9P80192 1104 aa26.36■■□□□ 1.81
CSNK1D-215ENST00000580784 CTU1Q7Z7A3 348 aaKnown RBP26.36■■□□□ 1.81
CSNK1D-215ENST00000580784 ZBED9Q6R2W3 1325 aa26.36■■□□□ 1.81
CSNK1D-215ENST00000580784 IGF2BP3O00425 579 aaKnown RBP eCLIP26.35■■□□□ 1.81
CSNK1D-215ENST00000580784 ZBTB22O15209 634 aa26.35■■□□□ 1.81
CSNK1D-215ENST00000580784 RASGRF1Q13972 1273 aa26.35■■□□□ 1.81
CSNK1D-215ENST00000580784 CDC42EP5Q6NZY7 148 aa26.35■■□□□ 1.81
CSNK1D-215ENST00000580784 DDX55Q8NHQ9 600 aaKnown RBP eCLIP26.35■■□□□ 1.81
CSNK1D-215ENST00000580784 OPTNQ96CV9 577 aa26.35■■□□□ 1.81
CSNK1D-215ENST00000580784 NEUROD6Q96NK8 337 aa26.35■■□□□ 1.81
CSNK1D-215ENST00000580784 CFHR5Q9BXR6 569 aa26.35■■□□□ 1.81
CSNK1D-215ENST00000580784 MYH2Q9UKX2 1941 aa26.35■■□□□ 1.81
CSNK1D-215ENST00000580784 AK9Q5TCS8 1911 aa26.34■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms