RNA–Protein interactions for RNA: ENST00000580741.5

LINC00271-207, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best)

Gene LINC00271, Length 596 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-207ENST00000580741 FKBP1BP68106 108 aa33.21■■■□□ 2.91
LINC00271-207ENST00000580741 PRKG1Q13976 671 aa33.21■■■□□ 2.91
LINC00271-207ENST00000580741 CCDC102BQ68D86 513 aa33.21■■■□□ 2.91
LINC00271-207ENST00000580741 WDR66Q8TBY9 1149 aa33.21■■■□□ 2.91
LINC00271-207ENST00000580741 MYH13Q9UKX3 1938 aa33.2■■■□□ 2.91
LINC00271-207ENST00000580741 FAM155AB1AL88 458 aaPredicted RBP33.2■■■□□ 2.91
LINC00271-207ENST00000580741 NF2P35240 595 aa33.2■■■□□ 2.91
LINC00271-207ENST00000580741 SPDYE2Q495Y8 402 aa33.2■■■□□ 2.91
LINC00271-207ENST00000580741 SSH3Q8TE77 659 aa33.2■■■□□ 2.91
LINC00271-207ENST00000580741 XAGE2Q96GT9 111 aa33.2■■■□□ 2.91
LINC00271-207ENST00000580741 ZNF70Q9UC06 446 aaPredicted RBP33.2■■■□□ 2.91
LINC00271-207ENST00000580741 AKAP2Q9Y2D5 859 aa33.2■■■□□ 2.91
LINC00271-207ENST00000580741 NOGQ13253 232 aa33.18■■■□□ 2.9
LINC00271-207ENST00000580741 TEKT1Q969V4 418 aa33.18■■■□□ 2.9
LINC00271-207ENST00000580741 NEUROD6Q96NK8 337 aa33.18■■■□□ 2.9
LINC00271-207ENST00000580741 FZD1Q9UP38 647 aa33.18■■■□□ 2.9
LINC00271-207ENST00000580741 MS4A1P11836 297 aa33.17■■■□□ 2.9
LINC00271-207ENST00000580741 DENND2AQ9ULE3 1009 aa33.17■■■□□ 2.9
LINC00271-207ENST00000580741 SUGT1Q9Y2Z0 365 aa33.17■■■□□ 2.9
LINC00271-207ENST00000580741 SLC10A3P09131 477 aa33.16■■■□□ 2.9
LINC00271-207ENST00000580741 PRDX5P30044 214 aa33.16■■■□□ 2.9
LINC00271-207ENST00000580741 CTCFP49711 727 aaPredicted RBP33.16■■■□□ 2.9
LINC00271-207ENST00000580741 HDLBPQ00341 1268 aaKnown RBP33.16■■■□□ 2.9
LINC00271-207ENST00000580741 OS9Q13438 667 aaPredicted RBP33.16■■■□□ 2.9
LINC00271-207ENST00000580741 RASA3Q14644 834 aa33.16■■■□□ 2.9
LINC00271-207ENST00000580741 CCDC102AQ96A19 550 aa33.16■■■□□ 2.9
LINC00271-207ENST00000580741 COG6Q9Y2V7 657 aa33.16■■■□□ 2.9
LINC00271-207ENST00000580741 SEMA3EO15041 775 aa33.15■■■□□ 2.9
LINC00271-207ENST00000580741 MAST3O60307 1309 aa33.15■■■□□ 2.9
LINC00271-207ENST00000580741 SURF6O75683 361 aaKnown RBP33.15■■■□□ 2.9
LINC00271-207ENST00000580741 CEP85Q6P2H3 762 aa33.15■■■□□ 2.9
LINC00271-207ENST00000580741 RASAL3Q86YV0 1011 aa33.15■■■□□ 2.9
LINC00271-207ENST00000580741 PPP2R3BQ9Y5P8 575 aa33.15■■■□□ 2.9
LINC00271-207ENST00000580741 SSC5DA1L4H1 1573 aa33.14■■■□□ 2.9
LINC00271-207ENST00000580741 TCP10L2B9ZVM9 353 aa33.14■■■□□ 2.9
LINC00271-207ENST00000580741 RASGRF1Q13972 1273 aa33.14■■■□□ 2.9
LINC00271-207ENST00000580741 MVPQ14764 893 aaKnown RBP33.14■■■□□ 2.9
LINC00271-207ENST00000580741 BEGAINQ9BUH8 593 aa33.14■■■□□ 2.9
LINC00271-207ENST00000580741 CACNB3P54284 484 aa33.13■■■□□ 2.89
LINC00271-207ENST00000580741 NBPF12Q5TAG4 269 aaPredicted RBP33.13■■■□□ 2.89
LINC00271-207ENST00000580741 ZDHHC15Q96MV8 337 aa33.13■■■□□ 2.89
LINC00271-207ENST00000580741 HSPA8P11142 646 aaKnown RBP33.12■■■□□ 2.89
LINC00271-207ENST00000580741 LBX1P52954 281 aa33.12■■■□□ 2.89
LINC00271-207ENST00000580741 KIF23Q02241 960 aaPredicted RBP33.12■■■□□ 2.89
LINC00271-207ENST00000580741 DIXDC1Q155Q3 683 aa33.12■■■□□ 2.89
LINC00271-207ENST00000580741 ARMC9Q7Z3E5 817 aa33.12■■■□□ 2.89
LINC00271-207ENST00000580741 TSKSQ9UJT2 592 aa33.12■■■□□ 2.89
LINC00271-207ENST00000580741 ANGEL1Q9UNK9 670 aaKnown RBP33.12■■■□□ 2.89
LINC00271-207ENST00000580741 TNFAIP1Q13829 316 aa33.11■■■□□ 2.89
LINC00271-207ENST00000580741 GORABQ5T7V8 394 aa33.11■■■□□ 2.89
LINC00271-207ENST00000580741 APOBEC3HQ6NTF7 200 aaKnown RBP33.11■■■□□ 2.89
LINC00271-207ENST00000580741 MRIQ9BWK5 157 aa33.11■■■□□ 2.89
LINC00271-207ENST00000580741 SALL1Q9NSC2 1324 aa33.1■■■□□ 2.89
LINC00271-207ENST00000580741 LDHBP07195 334 aaKnown RBP33.1■■■□□ 2.89
LINC00271-207ENST00000580741 HHIPL2Q6UWX4 724 aa33.1■■■□□ 2.89
LINC00271-207ENST00000580741 CDAN1Q8IWY9 1227 aa33.1■■■□□ 2.89
LINC00271-207ENST00000580741 NOP58Q9Y2X3 529 aaKnown RBP33.09■■■□□ 2.89
LINC00271-207ENST00000580741 SUPT20HL1Q3ZLR7 823 aa33.08■■■□□ 2.89
LINC00271-207ENST00000580741 TNNI3KQ59H18 835 aa33.08■■■□□ 2.89
LINC00271-207ENST00000580741 C20orf194Q5TEA3 1177 aa33.08■■■□□ 2.89
LINC00271-207ENST00000580741 TMEM39BQ9GZU3 492 aa33.08■■■□□ 2.89
LINC00271-207ENST00000580741 ZBTB4Q9P1Z0 1013 aaPredicted RBP33.08■■■□□ 2.89
LINC00271-207ENST00000580741 DDX19BQ9UMR2 479 aa33.08■■■□□ 2.89
LINC00271-207ENST00000580741 FPGT-TNNI3KV9GXZ4 949 aa33.08■■■□□ 2.89
LINC00271-207ENST00000580741 ZBTB22O15209 634 aa33.07■■■□□ 2.88
LINC00271-207ENST00000580741 ABCF2Q9UG63 623 aa33.07■■■□□ 2.88
LINC00271-207ENST00000580741 DAGLAQ9Y4D2 1042 aa33.07■■■□□ 2.88
LINC00271-207ENST00000580741 PI16Q6UXB8 463 aa33.06■■■□□ 2.88
LINC00271-207ENST00000580741 TNNI2P48788 182 aa33.05■■■□□ 2.88
LINC00271-207ENST00000580741 MKRN3Q13064 507 aaKnown RBP33.05■■■□□ 2.88
LINC00271-207ENST00000580741 LDLRAD1Q5T700 205 aa33.05■■■□□ 2.88
LINC00271-207ENST00000580741 YTHDC1Q96MU7 727 aaKnown RBP33.05■■■□□ 2.88
LINC00271-207ENST00000580741 TEPSINQ96N21 525 aa33.05■■■□□ 2.88
LINC00271-207ENST00000580741 DBNDD2Q9BQY9 259 aa33.05■■■□□ 2.88
LINC00271-207ENST00000580741 GPR108Q9NPR9 543 aa33.05■■■□□ 2.88
LINC00271-207ENST00000580741 PRDM10Q9NQV6 1147 aa33.05■■■□□ 2.88
LINC00271-207ENST00000580741 TMOD2Q9NZR1 351 aa33.05■■■□□ 2.88
LINC00271-207ENST00000580741 HMG20BQ9P0W2 317 aa33.05■■■□□ 2.88
LINC00271-207ENST00000580741 PDS5AQ29RF7 1337 aaKnown RBP33.04■■■□□ 2.88
LINC00271-207ENST00000580741 PPP1R12BO60237 982 aaPredicted RBP33.04■■■□□ 2.88
LINC00271-207ENST00000580741 ZBTB40Q9NUA8 1239 aa33.04■■■□□ 2.88
LINC00271-207ENST00000580741 EXOC6BQ9Y2D4 811 aa33.04■■■□□ 2.88
LINC00271-207ENST00000580741 ZGPATQ8N5A5 531 aaKnown RBP33.03■■■□□ 2.88
LINC00271-207ENST00000580741 ARID4AP29374 1257 aaPredicted RBP33.02■■■□□ 2.88
LINC00271-207ENST00000580741 MAP3K11Q16584 847 aa33.02■■■□□ 2.88
LINC00271-207ENST00000580741 TNS4Q8IZW8 715 aa33.02■■■□□ 2.88
LINC00271-207ENST00000580741 CLMNQ96JQ2 1002 aa33.02■■■□□ 2.88
LINC00271-207ENST00000580741 CSRNP1Q96S65 589 aa33.02■■■□□ 2.88
LINC00271-207ENST00000580741 CDC42EP5Q6NZY7 148 aa33.01■■■□□ 2.87
LINC00271-207ENST00000580741 DZIP1Q86YF9 867 aaKnown RBP33.01■■■□□ 2.87
LINC00271-207ENST00000580741 GOLGA6L2Q8N9W4 650 aaPredicted RBP33.01■■■□□ 2.87
LINC00271-207ENST00000580741 SPATA5Q8NB90 893 aa33.01■■■□□ 2.87
LINC00271-207ENST00000580741 CA12O43570 354 aa33■■■□□ 2.87
LINC00271-207ENST00000580741 USP2O75604 605 aaPredicted RBP33■■■□□ 2.87
LINC00271-207ENST00000580741 MCAMP43121 646 aa33■■■□□ 2.87
LINC00271-207ENST00000580741 TBC1D9Q6ZT07 1266 aa33■■■□□ 2.87
LINC00271-207ENST00000580741 PDE3AQ14432 1141 aa32.99■■■□□ 2.87
LINC00271-207ENST00000580741 TLR7Q9NYK1 1049 aaKnown RBP32.99■■■□□ 2.87
LINC00271-207ENST00000580741 UQCRFS1P1P0C7P4 283 aa32.98■■■□□ 2.87
LINC00271-207ENST00000580741 IREB2P48200 963 aaKnown RBP32.98■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms