RNA–Protein interactions for RNA: ENST00000580569.1

RFFL-207, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene RFFL, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-207ENST00000580569 MAP2K2P36507 400 aa9.54□□□□□ -0.88
RFFL-207ENST00000580569 ANAPC15P60006 121 aa9.54□□□□□ -0.88
RFFL-207ENST00000580569 ST5P78524 1137 aa9.54□□□□□ -0.88
RFFL-207ENST00000580569 OS9Q13438 667 aaPredicted RBP9.54□□□□□ -0.88
RFFL-207ENST00000580569 MAP1SQ66K74 1059 aaPredicted RBP9.54□□□□□ -0.88
RFFL-207ENST00000580569 ATG9AQ7Z3C6 839 aa9.54□□□□□ -0.88
RFFL-207ENST00000580569 AACSQ86V21 672 aa9.54□□□□□ -0.88
RFFL-207ENST00000580569 CAPNS2Q96L46 248 aa9.54□□□□□ -0.88
RFFL-207ENST00000580569 SETDB2Q96T68 719 aa9.54□□□□□ -0.88
RFFL-207ENST00000580569 TRAIPQ9BWF2 469 aa9.54□□□□□ -0.88
RFFL-207ENST00000580569 PLA2G12BQ9BX93 195 aa9.54□□□□□ -0.88
RFFL-207ENST00000580569 LSG1Q9H089 658 aaKnown RBP9.54□□□□□ -0.88
RFFL-207ENST00000580569 ZBTB3Q9H5J0 574 aa9.54□□□□□ -0.88
RFFL-207ENST00000580569 TLR7Q9NYK1 1049 aaKnown RBP9.54□□□□□ -0.88
RFFL-207ENST00000580569 CHMP5Q9NZZ3 219 aa9.54□□□□□ -0.88
RFFL-207ENST00000580569 ABT1Q9ULW3 272 aaKnown RBP9.54□□□□□ -0.88
RFFL-207ENST00000580569 MAP3K15Q6ZN16 1313 aa9.54□□□□□ -0.88
RFFL-207ENST00000580569 CAMTA2O94983 1202 aa9.53□□□□□ -0.88
RFFL-207ENST00000580569 MAP4K4O95819 1239 aaPredicted RBP9.53□□□□□ -0.88
RFFL-207ENST00000580569 IFIT2P09913 472 aaKnown RBP9.53□□□□□ -0.88
RFFL-207ENST00000580569 NPR1P16066 1061 aa9.53□□□□□ -0.88
RFFL-207ENST00000580569 HSPA4P34932 840 aa9.53□□□□□ -0.88
RFFL-207ENST00000580569 TNNI3KQ59H18 835 aa9.53□□□□□ -0.88
RFFL-207ENST00000580569 LMBR1LQ6UX01 489 aa9.53□□□□□ -0.88
RFFL-207ENST00000580569 RTKN2Q8IZC4 609 aa9.53□□□□□ -0.88
RFFL-207ENST00000580569 CCDC24Q8N4L8 307 aa9.53□□□□□ -0.88
RFFL-207ENST00000580569 KCTD17Q8N5Z5 321 aa9.53□□□□□ -0.88
RFFL-207ENST00000580569 KCNB2Q92953 911 aa9.53□□□□□ -0.88
RFFL-207ENST00000580569 GPR101Q96P66 508 aaPredicted RBP9.53□□□□□ -0.88
RFFL-207ENST00000580569 CCDC8Q9H0W5 538 aaPredicted RBP9.53□□□□□ -0.88
RFFL-207ENST00000580569 NPDC1Q9NQX5 325 aaPredicted RBP9.53□□□□□ -0.88
RFFL-207ENST00000580569 POLR3EQ9NVU0 708 aa9.53□□□□□ -0.88
RFFL-207ENST00000580569 PALD1Q9ULE6 856 aa9.53□□□□□ -0.88
RFFL-207ENST00000580569 TBC1D2BQ9UPU7 963 aa9.53□□□□□ -0.88
RFFL-207ENST00000580569 FPGT-TNNI3KV9GXZ4 949 aa9.53□□□□□ -0.88
RFFL-207ENST00000580569 POLR2AP24928 1970 aaKnown RBP9.53□□□□□ -0.88
RFFL-207ENST00000580569 RAD50Q92878 1312 aa9.53□□□□□ -0.88
RFFL-207ENST00000580569 PCCAP05165 728 aaPredicted RBP9.52□□□□□ -0.89
RFFL-207ENST00000580569 CSF1RP07333 972 aa9.52□□□□□ -0.89
RFFL-207ENST00000580569 IARSP41252 1262 aaKnown RBP9.52□□□□□ -0.89
RFFL-207ENST00000580569 IRX5P78411 483 aaPredicted RBP9.52□□□□□ -0.89
RFFL-207ENST00000580569 TFCP2Q12800 502 aa9.52□□□□□ -0.89
RFFL-207ENST00000580569 HLFQ16534 295 aa9.52□□□□□ -0.89
RFFL-207ENST00000580569 RTL5Q5HYW3 569 aaPredicted RBP9.52□□□□□ -0.89
RFFL-207ENST00000580569 CLEC4GQ6UXB4 293 aa9.52□□□□□ -0.89
RFFL-207ENST00000580569 TMEM92Q6UXU6 159 aa9.52□□□□□ -0.89
RFFL-207ENST00000580569 EVI5LQ96CN4 794 aa9.52□□□□□ -0.89
RFFL-207ENST00000580569 MCOLN1Q9GZU1 580 aa9.52□□□□□ -0.89
RFFL-207ENST00000580569 SIL1Q9H173 461 aa9.52□□□□□ -0.89
RFFL-207ENST00000580569 GPR108Q9NPR9 543 aa9.52□□□□□ -0.89
RFFL-207ENST00000580569 ZNF277Q9NRM2 450 aaPredicted RBP9.52□□□□□ -0.89
RFFL-207ENST00000580569 DBNLQ9UJU6 430 aaKnown RBP9.52□□□□□ -0.89
RFFL-207ENST00000580569 TLL2Q9Y6L7 1015 aa9.52□□□□□ -0.89
RFFL-207ENST00000580569 CDHR2Q9BYE9 1310 aa9.52□□□□□ -0.89
RFFL-207ENST00000580569 DOCK2Q92608 1830 aa9.52□□□□□ -0.89
RFFL-207ENST00000580569 ZNF609O15014 1411 aa9.51□□□□□ -0.89
RFFL-207ENST00000580569 ERVV-1B6SEH8 477 aa9.51□□□□□ -0.89
RFFL-207ENST00000580569 CIAO1O76071 339 aa9.51□□□□□ -0.89
RFFL-207ENST00000580569 ATP5JP18859 108 aa9.51□□□□□ -0.89
RFFL-207ENST00000580569 CST9Q5W186 159 aa9.51□□□□□ -0.89
RFFL-207ENST00000580569 CYP4F22Q6NT55 531 aa9.51□□□□□ -0.89
RFFL-207ENST00000580569 GPATCH3Q96I76 525 aa9.51□□□□□ -0.89
RFFL-207ENST00000580569 HHIPL1Q96JK4 782 aa9.51□□□□□ -0.89
RFFL-207ENST00000580569 PSMD1Q99460 953 aa9.51□□□□□ -0.89
RFFL-207ENST00000580569 OCEL1Q9H607 264 aa9.51□□□□□ -0.89
RFFL-207ENST00000580569 COL4A5P29400 1685 aa9.51□□□□□ -0.89
RFFL-207ENST00000580569 TAF1P21675 1872 aa9.51□□□□□ -0.89
RFFL-207ENST00000580569 RFX7Q2KHR2 1363 aa9.5□□□□□ -0.89
RFFL-207ENST00000580569 MED23Q9ULK4 1368 aa9.5□□□□□ -0.89
RFFL-207ENST00000580569 C19orf67A6NJJ6 358 aa9.5□□□□□ -0.89
RFFL-207ENST00000580569 EYA2O00167 538 aa9.5□□□□□ -0.89
RFFL-207ENST00000580569 NPHP1O15259 732 aa9.5□□□□□ -0.89
RFFL-207ENST00000580569 GALR2O43603 387 aaPredicted RBP9.5□□□□□ -0.89
RFFL-207ENST00000580569 RAB3GAP1Q15042 981 aa9.5□□□□□ -0.89
RFFL-207ENST00000580569 KIF6Q6ZMV9 814 aa9.5□□□□□ -0.89
RFFL-207ENST00000580569 USP50Q70EL3 339 aaPredicted RBP9.5□□□□□ -0.89
RFFL-207ENST00000580569 NLRP10Q86W26 655 aa9.5□□□□□ -0.89
RFFL-207ENST00000580569 ZBTB38Q8NAP3 1195 aaPredicted RBP9.5□□□□□ -0.89
RFFL-207ENST00000580569 ANO2Q9NQ90 1003 aa9.5□□□□□ -0.89
RFFL-207ENST00000580569 CYP2E1P05181 493 aaPredicted RBP9.49□□□□□ -0.89
RFFL-207ENST00000580569 ALDH1B1P30837 517 aa9.49□□□□□ -0.89
RFFL-207ENST00000580569 IL15P40933 162 aaPredicted RBP9.49□□□□□ -0.89
RFFL-207ENST00000580569 SCNN1DP51172 638 aa9.49□□□□□ -0.89
RFFL-207ENST00000580569 CUL4AQ13619 759 aa9.49□□□□□ -0.89
RFFL-207ENST00000580569 LRRC24Q50LG9 513 aa9.49□□□□□ -0.89
RFFL-207ENST00000580569 HSP90AB3PQ58FF7 597 aa9.49□□□□□ -0.89
RFFL-207ENST00000580569 CC2D2BQ6DHV5 1058 aa9.49□□□□□ -0.89
RFFL-207ENST00000580569 CLEC17AQ6ZS10 378 aa9.49□□□□□ -0.89
RFFL-207ENST00000580569 SAPCD2Q86UD0 394 aa9.49□□□□□ -0.89
RFFL-207ENST00000580569 ZNF34Q8IZ26 560 aa9.49□□□□□ -0.89
RFFL-207ENST00000580569 SYNE4Q8N205 404 aa9.49□□□□□ -0.89
RFFL-207ENST00000580569 JDP2Q8WYK2 163 aa9.49□□□□□ -0.89
RFFL-207ENST00000580569 HAUS7Q99871 368 aa9.49□□□□□ -0.89
RFFL-207ENST00000580569 DBNDD2Q9BQY9 259 aa9.49□□□□□ -0.89
RFFL-207ENST00000580569 BOLA2Q9H3K6 86 aa9.49□□□□□ -0.89
RFFL-207ENST00000580569 RIC1Q4ADV7 1423 aa9.48□□□□□ -0.89
RFFL-207ENST00000580569 SPDYE5A6NIY4 337 aa9.48□□□□□ -0.89
RFFL-207ENST00000580569 HIP1O00291 1037 aa9.48□□□□□ -0.89
RFFL-207ENST00000580569 ST18O60284 1047 aa9.48□□□□□ -0.89
RFFL-207ENST00000580569 MCCP23508 829 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms