RNA–Protein interactions for RNA: ENST00000579358.1

MKS1-208, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-208ENST00000579358 GRIK5Q16478 980 aa12.3□□□□□ -0.44
MKS1-208ENST00000579358 NBPF9Q3BBW0 867 aa12.3□□□□□ -0.44
MKS1-208ENST00000579358 KRT26Q7Z3Y9 468 aa12.3□□□□□ -0.44
MKS1-208ENST00000579358 SULF1Q8IWU6 871 aa12.3□□□□□ -0.44
MKS1-208ENST00000579358 EXOC6Q8TAG9 804 aa12.3□□□□□ -0.44
MKS1-208ENST00000579358 TEKT1Q969V4 418 aa12.3□□□□□ -0.44
MKS1-208ENST00000579358 GLIS2Q9BZE0 524 aaPredicted RBP12.3□□□□□ -0.44
MKS1-208ENST00000579358 CCDC8Q9H0W5 538 aaPredicted RBP12.3□□□□□ -0.44
MKS1-208ENST00000579358 ASTN2O75129 1339 aaPredicted RBP12.3□□□□□ -0.44
MKS1-208ENST00000579358 IFIT2P09913 472 aaKnown RBP12.29□□□□□ -0.44
MKS1-208ENST00000579358 RBM5P52756 815 aaKnown RBP eCLIP12.29□□□□□ -0.44
MKS1-208ENST00000579358 SPTY2D1Q68D10 685 aaPredicted RBP12.29□□□□□ -0.44
MKS1-208ENST00000579358 HHIPL2Q6UWX4 724 aa12.29□□□□□ -0.44
MKS1-208ENST00000579358 APOBEC3FQ8IUX4 373 aaKnown RBP12.29□□□□□ -0.44
MKS1-208ENST00000579358 ZDHHC15Q96MV8 337 aa12.29□□□□□ -0.44
MKS1-208ENST00000579358 CREBZFQ9NS37 354 aa12.29□□□□□ -0.44
MKS1-208ENST00000579358 TMEM88BA6NKF7 163 aa12.28□□□□□ -0.44
MKS1-208ENST00000579358 TRAF5O00463 557 aa12.28□□□□□ -0.44
MKS1-208ENST00000579358 PI16Q6UXB8 463 aa12.28□□□□□ -0.44
MKS1-208ENST00000579358 USP48Q86UV5 1035 aa12.28□□□□□ -0.44
MKS1-208ENST00000579358 PRMT6Q96LA8 375 aaPredicted RBP12.28□□□□□ -0.44
MKS1-208ENST00000579358 ADM5C9JUS6 153 aa12.27□□□□□ -0.45
MKS1-208ENST00000579358 SPDYE2Q495Y8 402 aa12.27□□□□□ -0.45
MKS1-208ENST00000579358 ERICH6Q7L0X2 663 aa12.27□□□□□ -0.45
MKS1-208ENST00000579358 DZIP1Q86YF9 867 aaKnown RBP12.27□□□□□ -0.45
MKS1-208ENST00000579358 SLF2Q8IX21 1173 aa12.27□□□□□ -0.45
MKS1-208ENST00000579358 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.27□□□□□ -0.45
MKS1-208ENST00000579358 GCC1Q96CN9 775 aa12.27□□□□□ -0.45
MKS1-208ENST00000579358 ABCF2Q9UG63 623 aa12.27□□□□□ -0.45
MKS1-208ENST00000579358 PCDHAC2Q9Y5I4 1007 aa12.27□□□□□ -0.45
MKS1-208ENST00000579358 PPP2R3BQ9Y5P8 575 aa12.27□□□□□ -0.45
MKS1-208ENST00000579358 ZAP70P43403 619 aa12.26□□□□□ -0.45
MKS1-208ENST00000579358 TNFAIP1Q13829 316 aa12.26□□□□□ -0.45
MKS1-208ENST00000579358 APOBEC3HQ6NTF7 200 aaKnown RBP12.26□□□□□ -0.45
MKS1-208ENST00000579358 FAM163AQ96GL9 167 aaPredicted RBP12.26□□□□□ -0.45
MKS1-208ENST00000579358 RWDD1Q9H446 243 aaPredicted RBP12.26□□□□□ -0.45
MKS1-208ENST00000579358 DAGLAQ9Y4D2 1042 aa12.26□□□□□ -0.45
MKS1-208ENST00000579358 GAKO14976 1311 aa12.26□□□□□ -0.45
MKS1-208ENST00000579358 CLRN2A0PK11 232 aa12.25□□□□□ -0.45
MKS1-208ENST00000579358 SMARCA5O60264 1052 aaPredicted RBP12.25□□□□□ -0.45
MKS1-208ENST00000579358 CELF2O95319 508 aaKnown RBP12.25□□□□□ -0.45
MKS1-208ENST00000579358 CYP2E1P05181 493 aaPredicted RBP12.25□□□□□ -0.45
MKS1-208ENST00000579358 GSTO1P78417 241 aa12.25□□□□□ -0.45
MKS1-208ENST00000579358 FMR1Q06787 632 aaKnown RBP eCLIP12.25□□□□□ -0.45
MKS1-208ENST00000579358 DIXDC1Q155Q3 683 aa12.25□□□□□ -0.45
MKS1-208ENST00000579358 CST9Q5W186 159 aa12.25□□□□□ -0.45
MKS1-208ENST00000579358 TMED8Q6PL24 325 aaPredicted RBP12.25□□□□□ -0.45
MKS1-208ENST00000579358 CDCA5Q96FF9 252 aa12.25□□□□□ -0.45
MKS1-208ENST00000579358 TDRD3Q9H7E2 651 aaKnown RBP12.25□□□□□ -0.45
MKS1-208ENST00000579358 SNRKQ9NRH2 765 aa12.25□□□□□ -0.45
MKS1-208ENST00000579358 LRP2BPQ9P2M1 347 aa12.25□□□□□ -0.45
MKS1-208ENST00000579358 ZNF70Q9UC06 446 aaPredicted RBP12.25□□□□□ -0.45
MKS1-208ENST00000579358 AOX1Q06278 1338 aa12.25□□□□□ -0.45
MKS1-208ENST00000579358 MROH7-TTC4A0A0A0MT08 1334 aa12.24□□□□□ -0.45
MKS1-208ENST00000579358 ATP5JP18859 108 aa12.24□□□□□ -0.45
MKS1-208ENST00000579358 MECOMQ03112 1051 aa12.24□□□□□ -0.45
MKS1-208ENST00000579358 FKBP1CQ5VVH2 108 aa12.24□□□□□ -0.45
MKS1-208ENST00000579358 TBC1D9Q6ZT07 1266 aa12.24□□□□□ -0.45
MKS1-208ENST00000579358 NSUN4Q96CB9 384 aaKnown RBP12.24□□□□□ -0.45
MKS1-208ENST00000579358 GPATCH3Q96I76 525 aa12.24□□□□□ -0.45
MKS1-208ENST00000579358 DEFB129Q9H1M3 183 aa12.24□□□□□ -0.45
MKS1-208ENST00000579358 ZNF408Q9H9D4 720 aa12.24□□□□□ -0.45
MKS1-208ENST00000579358 VEZTQ9HBM0 779 aa12.24□□□□□ -0.45
MKS1-208ENST00000579358 TMOD2Q9NZR1 351 aa12.24□□□□□ -0.45
MKS1-208ENST00000579358 RAI14Q9P0K7 980 aa12.24□□□□□ -0.45
MKS1-208ENST00000579358 LDHCP07864 332 aa12.23□□□□□ -0.45
MKS1-208ENST00000579358 NF2P35240 595 aa12.23□□□□□ -0.45
MKS1-208ENST00000579358 TNNI2P48788 182 aa12.23□□□□□ -0.45
MKS1-208ENST00000579358 FKBP1BP68106 108 aa12.23□□□□□ -0.45
MKS1-208ENST00000579358 IRX6P78412 446 aaPredicted RBP12.23□□□□□ -0.45
MKS1-208ENST00000579358 TTF1Q15361 905 aaPredicted RBP12.23□□□□□ -0.45
MKS1-208ENST00000579358 SMC5Q8IY18 1101 aa12.23□□□□□ -0.45
MKS1-208ENST00000579358 ZNF384Q8TF68 577 aa12.23□□□□□ -0.45
MKS1-208ENST00000579358 HHIPL1Q96JK4 782 aa12.23□□□□□ -0.45
MKS1-208ENST00000579358 GBA2Q9HCG7 927 aaPredicted RBP12.23□□□□□ -0.45
MKS1-208ENST00000579358 PIH1D3Q9NQM4 214 aaKnown RBP12.23□□□□□ -0.45
MKS1-208ENST00000579358 ECHDC1Q9NTX5 307 aa12.23□□□□□ -0.45
MKS1-208ENST00000579358 ZBTB47Q9UFB7 747 aaPredicted RBP12.23□□□□□ -0.45
MKS1-208ENST00000579358 TLL2Q9Y6L7 1015 aa12.23□□□□□ -0.45
MKS1-208ENST00000579358 MYH13Q9UKX3 1938 aa12.23□□□□□ -0.45
MKS1-208ENST00000579358 CNTNAP1P78357 1384 aa12.22□□□□□ -0.45
MKS1-208ENST00000579358 RPAP1Q9BWH6 1393 aaPredicted RBP12.22□□□□□ -0.45
MKS1-208ENST00000579358 TTC41PQ6P2S7 1318 aa12.22□□□□□ -0.45
MKS1-208ENST00000579358 GPR75-ASB3A0A0A6YYF3 556 aa12.22□□□□□ -0.45
MKS1-208ENST00000579358 RASSF10A6NK89 507 aa12.22□□□□□ -0.45
MKS1-208ENST00000579358 MAP4K4O95819 1239 aaPredicted RBP12.22□□□□□ -0.45
MKS1-208ENST00000579358 HTRA3P83110 453 aa12.22□□□□□ -0.45
MKS1-208ENST00000579358 RASA3Q14644 834 aa12.22□□□□□ -0.45
MKS1-208ENST00000579358 CDC42EP5Q6NZY7 148 aa12.22□□□□□ -0.45
MKS1-208ENST00000579358 DLK2Q6UY11 383 aa12.22□□□□□ -0.45
MKS1-208ENST00000579358 SAPCD2Q86UD0 394 aa12.22□□□□□ -0.45
MKS1-208ENST00000579358 FAM83AQ86UY5 434 aa12.22□□□□□ -0.45
MKS1-208ENST00000579358 C2orf69Q8N8R5 385 aa12.22□□□□□ -0.45
MKS1-208ENST00000579358 HAUS7Q99871 368 aa12.22□□□□□ -0.45
MKS1-208ENST00000579358 ABT1Q9ULW3 272 aaKnown RBP12.22□□□□□ -0.45
MKS1-208ENST00000579358 SCAF8Q9UPN6 1271 aaKnown RBP12.22□□□□□ -0.45
MKS1-208ENST00000579358 RFX7Q2KHR2 1363 aa12.21□□□□□ -0.45
MKS1-208ENST00000579358 IGHDP01880 384 aa12.21□□□□□ -0.45
MKS1-208ENST00000579358 BTDP43251 543 aa12.21□□□□□ -0.45
MKS1-208ENST00000579358 MAP3K12Q12852 859 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms