RNA–Protein interactions for RNA: ENST00000579238.1

CASC3-206, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 517 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-206ENST00000579238 TNNI2P48788 182 aa10.81□□□□□ -0.68
CASC3-206ENST00000579238 GTF2A2P52657 109 aa10.81□□□□□ -0.68
CASC3-206ENST00000579238 MAP3K9P80192 1104 aa10.81□□□□□ -0.68
CASC3-206ENST00000579238 ARHGEF6Q15052 776 aa10.81□□□□□ -0.68
CASC3-206ENST00000579238 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.81□□□□□ -0.68
CASC3-206ENST00000579238 BRI3BPQ8WY22 251 aa10.81□□□□□ -0.68
CASC3-206ENST00000579238 PUS3Q9BZE2 481 aaKnown RBP10.81□□□□□ -0.68
CASC3-206ENST00000579238 SRCIN1Q9C0H9 1055 aa10.81□□□□□ -0.68
CASC3-206ENST00000579238 TMEM39BQ9GZU3 492 aa10.81□□□□□ -0.68
CASC3-206ENST00000579238 ZFYVE28Q9HCC9 887 aa10.81□□□□□ -0.68
CASC3-206ENST00000579238 MRS2Q9HD23 443 aa10.81□□□□□ -0.68
CASC3-206ENST00000579238 RIPOR2Q9Y4F9 1068 aa10.81□□□□□ -0.68
CASC3-206ENST00000579238 CSADQ9Y600 493 aa10.81□□□□□ -0.68
CASC3-206ENST00000579238 KIAA0100Q14667 2235 aaKnown RBP10.81□□□□□ -0.68
CASC3-206ENST00000579238 MROH5Q6ZUA9 1318 aa10.81□□□□□ -0.68
CASC3-206ENST00000579238 CCL15-CCL14A0A0B4J2E2 113 aa10.8□□□□□ -0.68
CASC3-206ENST00000579238 EN2P19622 333 aaPredicted RBP10.8□□□□□ -0.68
CASC3-206ENST00000579238 HDLBPQ00341 1268 aaKnown RBP10.8□□□□□ -0.68
CASC3-206ENST00000579238 CAP1Q01518 475 aa10.8□□□□□ -0.68
CASC3-206ENST00000579238 VGLL4Q14135 290 aa10.8□□□□□ -0.68
CASC3-206ENST00000579238 TAF1CQ15572 869 aaPredicted RBP10.8□□□□□ -0.68
CASC3-206ENST00000579238 CCL15Q16663 113 aa10.8□□□□□ -0.68
CASC3-206ENST00000579238 SLC4A10Q6U841 1118 aa10.8□□□□□ -0.68
CASC3-206ENST00000579238 FBXO33Q7Z6M2 555 aa10.8□□□□□ -0.68
CASC3-206ENST00000579238 VPS37DQ86XT2 251 aa10.8□□□□□ -0.68
CASC3-206ENST00000579238 CDAN1Q8IWY9 1227 aa10.8□□□□□ -0.68
CASC3-206ENST00000579238 TBC1D22AQ8WUA7 517 aa10.8□□□□□ -0.68
CASC3-206ENST00000579238 CNKSR2Q8WXI2 1034 aa10.8□□□□□ -0.68
CASC3-206ENST00000579238 KAZALD1Q96I82 304 aa10.8□□□□□ -0.68
CASC3-206ENST00000579238 SUCLG2Q96I99 432 aa10.8□□□□□ -0.68
CASC3-206ENST00000579238 TMEM106CQ9BVX2 250 aa10.8□□□□□ -0.68
CASC3-206ENST00000579238 SPINK5Q9NQ38 1064 aaPredicted RBP10.8□□□□□ -0.68
CASC3-206ENST00000579238 BRCA2P51587 3418 aa10.8□□□□□ -0.68
CASC3-206ENST00000579238 OTOFQ9HC10 1997 aa10.79□□□□□ -0.68
CASC3-206ENST00000579238 HABP4Q5JVS0 413 aaKnown RBP10.79□□□□□ -0.68
CASC3-206ENST00000579238 NBPF11Q86T75 865 aa10.79□□□□□ -0.68
CASC3-206ENST00000579238 ZNF333Q96JL9 665 aa10.79□□□□□ -0.68
CASC3-206ENST00000579238 RBBP6Q7Z6E9 1792 aaKnown RBP10.79□□□□□ -0.68
CASC3-206ENST00000579238 UTYO14607 1347 aa10.79□□□□□ -0.68
CASC3-206ENST00000579238 ARAP2Q8WZ64 1704 aa10.78□□□□□ -0.68
CASC3-206ENST00000579238 SPDYE5A6NIY4 337 aa10.78□□□□□ -0.68
CASC3-206ENST00000579238 WDHD1O75717 1129 aaPredicted RBP10.78□□□□□ -0.68
CASC3-206ENST00000579238 NBPF7P0C2Y1 421 aaPredicted RBP10.78□□□□□ -0.68
CASC3-206ENST00000579238 CHAF1AQ13111 956 aaPredicted RBP10.78□□□□□ -0.68
CASC3-206ENST00000579238 GRIK5Q16478 980 aa10.78□□□□□ -0.68
CASC3-206ENST00000579238 RABL6Q3YEC7 729 aaPredicted RBP10.78□□□□□ -0.68
CASC3-206ENST00000579238 SLC9C1Q4G0N8 1177 aa10.78□□□□□ -0.68
CASC3-206ENST00000579238 CAVIN4Q5BKX8 364 aa10.78□□□□□ -0.68
CASC3-206ENST00000579238 METTL24Q5JXM2 366 aa10.78□□□□□ -0.68
CASC3-206ENST00000579238 FAM43AQ8N2R8 423 aa10.78□□□□□ -0.68
CASC3-206ENST00000579238 TEKT1Q969V4 418 aa10.78□□□□□ -0.68
CASC3-206ENST00000579238 OTUD5Q96G74 571 aa10.78□□□□□ -0.68
CASC3-206ENST00000579238 MRIQ9BWK5 157 aa10.78□□□□□ -0.68
CASC3-206ENST00000579238 ZCCHC17Q9NP64 241 aaKnown RBP10.78□□□□□ -0.68
CASC3-206ENST00000579238 SUGT1Q9Y2Z0 365 aa10.78□□□□□ -0.68
CASC3-206ENST00000579238 TLR2O60603 784 aa10.77□□□□□ -0.69
CASC3-206ENST00000579238 FRAT2O75474 233 aaPredicted RBP10.77□□□□□ -0.69
CASC3-206ENST00000579238 CETPP11597 493 aa10.77□□□□□ -0.69
CASC3-206ENST00000579238 LRRC24Q50LG9 513 aa10.77□□□□□ -0.69
CASC3-206ENST00000579238 FKBP1CQ5VVH2 108 aa10.77□□□□□ -0.69
CASC3-206ENST00000579238 FAM83AQ86UY5 434 aa10.77□□□□□ -0.69
CASC3-206ENST00000579238 ERO1BQ86YB8 467 aa10.77□□□□□ -0.69
CASC3-206ENST00000579238 VGLL2Q8N8G2 317 aa10.77□□□□□ -0.69
CASC3-206ENST00000579238 HOOK2Q96ED9 719 aa10.77□□□□□ -0.69
CASC3-206ENST00000579238 ZDHHC15Q96MV8 337 aa10.77□□□□□ -0.69
CASC3-206ENST00000579238 BICC1Q9H694 974 aaKnown RBP10.77□□□□□ -0.69
CASC3-206ENST00000579238 TMOD2Q9NZR1 351 aa10.77□□□□□ -0.69
CASC3-206ENST00000579238 IQSEC3Q9UPP2 1182 aaPredicted RBP10.77□□□□□ -0.69
CASC3-206ENST00000579238 PTCH2Q9Y6C5 1203 aa10.77□□□□□ -0.69
CASC3-206ENST00000579238 SNCAIPQ9Y6H5 919 aa10.77□□□□□ -0.69
CASC3-206ENST00000579238 MAST3O60307 1309 aa10.77□□□□□ -0.69
CASC3-206ENST00000579238 BTBD19C9JJ37 291 aa10.76□□□□□ -0.69
CASC3-206ENST00000579238 PDE8BO95263 885 aa10.76□□□□□ -0.69
CASC3-206ENST00000579238 CACNB3P54284 484 aa10.76□□□□□ -0.69
CASC3-206ENST00000579238 SNAPC2Q13487 334 aa10.76□□□□□ -0.69
CASC3-206ENST00000579238 KIF22Q14807 665 aa10.76□□□□□ -0.69
CASC3-206ENST00000579238 SLC4A8Q2Y0W8 1093 aa10.76□□□□□ -0.69
CASC3-206ENST00000579238 APOBEC3HQ6NTF7 200 aaKnown RBP10.76□□□□□ -0.69
CASC3-206ENST00000579238 WRNIP1Q96S55 665 aa10.76□□□□□ -0.69
CASC3-206ENST00000579238 KIF16BQ96L93 1317 aa10.76□□□□□ -0.69
CASC3-206ENST00000579238 IRF6O14896 467 aa10.75□□□□□ -0.69
CASC3-206ENST00000579238 ANP32CO43423 234 aa10.75□□□□□ -0.69
CASC3-206ENST00000579238 GNRH1P01148 92 aa10.75□□□□□ -0.69
CASC3-206ENST00000579238 BCAMP50895 628 aa10.75□□□□□ -0.69
CASC3-206ENST00000579238 PRMT2P55345 433 aa10.75□□□□□ -0.69
CASC3-206ENST00000579238 LACTBP83111 547 aaPredicted RBP10.75□□□□□ -0.69
CASC3-206ENST00000579238 PPIL2Q13356 520 aa10.75□□□□□ -0.69
CASC3-206ENST00000579238 DCAF15Q66K64 600 aa10.75□□□□□ -0.69
CASC3-206ENST00000579238 HHIPL2Q6UWX4 724 aa10.75□□□□□ -0.69
CASC3-206ENST00000579238 ANKRD44Q8N8A2 993 aa10.75□□□□□ -0.69
CASC3-206ENST00000579238 RPAP1Q9BWH6 1393 aaPredicted RBP10.75□□□□□ -0.69
CASC3-206ENST00000579238 IFIT1P09914 478 aaKnown RBP10.74□□□□□ -0.69
CASC3-206ENST00000579238 FGFR2P21802 821 aa10.74□□□□□ -0.69
CASC3-206ENST00000579238 PUM3Q15397 648 aaKnown RBP10.74□□□□□ -0.69
CASC3-206ENST00000579238 ZKSCAN4Q969J2 545 aaPredicted RBP10.74□□□□□ -0.69
CASC3-206ENST00000579238 ZNF341Q9BYN7 854 aa10.74□□□□□ -0.69
CASC3-206ENST00000579238 ARHGAP39Q9C0H5 1083 aa10.74□□□□□ -0.69
CASC3-206ENST00000579238 PPATQ06203 517 aa10.73□□□□□ -0.69
CASC3-206ENST00000579238 MRPL50Q8N5N7 158 aaKnown RBP10.73□□□□□ -0.69
CASC3-206ENST00000579238 KLHDC4Q8TBB5 520 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms