RNA–Protein interactions for RNA: ENST00000579122.1

CDKN2A-213, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3 BASIC

Gene CDKN2A, Length 666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-213ENST00000579122 ELP3Q9H9T3 547 aa24.21■■□□□ 1.47
CDKN2A-213ENST00000579122 CRKP46108 304 aa24.2■■□□□ 1.46
CDKN2A-213ENST00000579122 TNNI2P48788 182 aa24.2■■□□□ 1.46
CDKN2A-213ENST00000579122 RABL6Q3YEC7 729 aaPredicted RBP24.2■■□□□ 1.46
CDKN2A-213ENST00000579122 FBXO33Q7Z6M2 555 aa24.2■■□□□ 1.46
CDKN2A-213ENST00000579122 OPTNQ96CV9 577 aa24.2■■□□□ 1.46
CDKN2A-213ENST00000579122 VPS37DQ86XT2 251 aa24.19■■□□□ 1.46
CDKN2A-213ENST00000579122 BICC1Q9H694 974 aaKnown RBP24.19■■□□□ 1.46
CDKN2A-213ENST00000579122 OTOFQ9HC10 1997 aa24.19■■□□□ 1.46
CDKN2A-213ENST00000579122 TCP10L2B9ZVM9 353 aa24.18■■□□□ 1.46
CDKN2A-213ENST00000579122 HDLBPQ00341 1268 aaKnown RBP24.18■■□□□ 1.46
CDKN2A-213ENST00000579122 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.18■■□□□ 1.46
CDKN2A-213ENST00000579122 CDAN1Q8IWY9 1227 aa24.18■■□□□ 1.46
CDKN2A-213ENST00000579122 FAM9BQ8IZU0 186 aa24.18■■□□□ 1.46
CDKN2A-213ENST00000579122 CD99L2Q8TCZ2 262 aa24.18■■□□□ 1.46
CDKN2A-213ENST00000579122 TBC1D22AQ8WUA7 517 aa24.18■■□□□ 1.46
CDKN2A-213ENST00000579122 TMEM39BQ9GZU3 492 aa24.18■■□□□ 1.46
CDKN2A-213ENST00000579122 PTPN22Q9Y2R2 807 aa24.18■■□□□ 1.46
CDKN2A-213ENST00000579122 CENPFP49454 3210 aa24.18■■□□□ 1.46
CDKN2A-213ENST00000579122 SP3Q02447 781 aa24.17■■□□□ 1.46
CDKN2A-213ENST00000579122 GRIK5Q16478 980 aa24.17■■□□□ 1.46
CDKN2A-213ENST00000579122 CAVIN4Q5BKX8 364 aa24.17■■□□□ 1.46
CDKN2A-213ENST00000579122 MS4A4AQ96JQ5 239 aa24.17■■□□□ 1.46
CDKN2A-213ENST00000579122 MAP3K9P80192 1104 aa24.16■■□□□ 1.46
CDKN2A-213ENST00000579122 LRRC24Q50LG9 513 aa24.16■■□□□ 1.46
CDKN2A-213ENST00000579122 METTL24Q5JXM2 366 aa24.16■■□□□ 1.46
CDKN2A-213ENST00000579122 ANKRD44Q8N8A2 993 aa24.16■■□□□ 1.46
CDKN2A-213ENST00000579122 VGLL2Q8N8G2 317 aa24.16■■□□□ 1.46
CDKN2A-213ENST00000579122 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.16■■□□□ 1.46
CDKN2A-213ENST00000579122 EFCC1Q9HA90 598 aa24.16■■□□□ 1.46
CDKN2A-213ENST00000579122 IQSEC3Q9UPP2 1182 aaPredicted RBP24.16■■□□□ 1.46
CDKN2A-213ENST00000579122 ZNF521Q96K83 1311 aa24.15■■□□□ 1.46
CDKN2A-213ENST00000579122 FRAT2O75474 233 aaPredicted RBP24.15■■□□□ 1.46
CDKN2A-213ENST00000579122 PDE8BO95263 885 aa24.15■■□□□ 1.46
CDKN2A-213ENST00000579122 CHAF1AQ13111 956 aaPredicted RBP24.15■■□□□ 1.46
CDKN2A-213ENST00000579122 VGLL4Q14135 290 aa24.15■■□□□ 1.46
CDKN2A-213ENST00000579122 MRPL50Q8N5N7 158 aaKnown RBP24.15■■□□□ 1.46
CDKN2A-213ENST00000579122 GTF2A2P52657 109 aa24.14■■□□□ 1.45
CDKN2A-213ENST00000579122 BRI3BPQ8WY22 251 aa24.14■■□□□ 1.45
CDKN2A-213ENST00000579122 TEKT1Q969V4 418 aa24.14■■□□□ 1.45
CDKN2A-213ENST00000579122 MRIQ9BWK5 157 aa24.14■■□□□ 1.45
CDKN2A-213ENST00000579122 CSADQ9Y600 493 aa24.14■■□□□ 1.45
CDKN2A-213ENST00000579122 PTPRCP08575 1304 aa24.13■■□□□ 1.45
CDKN2A-213ENST00000579122 MKI67P46013 3256 aaKnown RBP24.13■■□□□ 1.45
CDKN2A-213ENST00000579122 CNKSR2Q8WXI2 1034 aa24.13■■□□□ 1.45
CDKN2A-213ENST00000579122 ARMC5Q96C12 935 aa24.13■■□□□ 1.45
CDKN2A-213ENST00000579122 KIF16BQ96L93 1317 aa24.12■■□□□ 1.45
CDKN2A-213ENST00000579122 CCL15-CCL14A0A0B4J2E2 113 aa24.12■■□□□ 1.45
CDKN2A-213ENST00000579122 POTEFA5A3E0 1075 aa24.12■■□□□ 1.45
CDKN2A-213ENST00000579122 CCL15Q16663 113 aa24.12■■□□□ 1.45
CDKN2A-213ENST00000579122 ZDHHC15Q96MV8 337 aa24.12■■□□□ 1.45
CDKN2A-213ENST00000579122 ZFYVE28Q9HCC9 887 aa24.12■■□□□ 1.45
CDKN2A-213ENST00000579122 SUGT1Q9Y2Z0 365 aa24.12■■□□□ 1.45
CDKN2A-213ENST00000579122 BRCA2P51587 3418 aa24.12■■□□□ 1.45
CDKN2A-213ENST00000579122 BCAMP50895 628 aa24.11■■□□□ 1.45
CDKN2A-213ENST00000579122 ARHGEF6Q15052 776 aa24.11■■□□□ 1.45
CDKN2A-213ENST00000579122 TAF1CQ15572 869 aaPredicted RBP24.11■■□□□ 1.45
CDKN2A-213ENST00000579122 FKBP1CQ5VVH2 108 aa24.11■■□□□ 1.45
CDKN2A-213ENST00000579122 FAM83AQ86UY5 434 aa24.11■■□□□ 1.45
CDKN2A-213ENST00000579122 OTUD5Q96G74 571 aa24.11■■□□□ 1.45
CDKN2A-213ENST00000579122 MAST3O60307 1309 aa24.1■■□□□ 1.45
CDKN2A-213ENST00000579122 SPDYE5A6NIY4 337 aa24.1■■□□□ 1.45
CDKN2A-213ENST00000579122 CACNB3P54284 484 aa24.1■■□□□ 1.45
CDKN2A-213ENST00000579122 CAP1Q01518 475 aa24.1■■□□□ 1.45
CDKN2A-213ENST00000579122 HOOK2Q96ED9 719 aa24.1■■□□□ 1.45
CDKN2A-213ENST00000579122 TMOD2Q9NZR1 351 aa24.1■■□□□ 1.45
CDKN2A-213ENST00000579122 RBBP6Q7Z6E9 1792 aaKnown RBP24.1■■□□□ 1.45
CDKN2A-213ENST00000579122 FGFR2P21802 821 aa24.09■■□□□ 1.45
CDKN2A-213ENST00000579122 PUM3Q15397 648 aaKnown RBP24.09■■□□□ 1.45
CDKN2A-213ENST00000579122 APOBEC3HQ6NTF7 200 aaKnown RBP24.09■■□□□ 1.45
CDKN2A-213ENST00000579122 KLHDC4Q8TBB5 520 aa24.09■■□□□ 1.45
CDKN2A-213ENST00000579122 IFIT1P09914 478 aaKnown RBP24.08■■□□□ 1.45
CDKN2A-213ENST00000579122 ERO1BQ86YB8 467 aa24.08■■□□□ 1.45
CDKN2A-213ENST00000579122 FAM43AQ8N2R8 423 aa24.08■■□□□ 1.45
CDKN2A-213ENST00000579122 GCC1Q96CN9 775 aa24.08■■□□□ 1.45
CDKN2A-213ENST00000579122 USP44Q9H0E7 712 aa24.08■■□□□ 1.45
CDKN2A-213ENST00000579122 SNCAIPQ9Y6H5 919 aa24.08■■□□□ 1.45
CDKN2A-213ENST00000579122 WDHD1O75717 1129 aaPredicted RBP24.07■■□□□ 1.44
CDKN2A-213ENST00000579122 HHIPL2Q6UWX4 724 aa24.07■■□□□ 1.44
CDKN2A-213ENST00000579122 WRNIP1Q96S55 665 aa24.07■■□□□ 1.44
CDKN2A-213ENST00000579122 ZCCHC17Q9NP64 241 aaKnown RBP24.07■■□□□ 1.44
CDKN2A-213ENST00000579122 RPAP1Q9BWH6 1393 aaPredicted RBP24.06■■□□□ 1.44
CDKN2A-213ENST00000579122 CETPP11597 493 aa24.06■■□□□ 1.44
CDKN2A-213ENST00000579122 SSH1Q8WYL5 1049 aa24.06■■□□□ 1.44
CDKN2A-213ENST00000579122 E9PSI1 815 aa24.05■■□□□ 1.44
CDKN2A-213ENST00000579122 ZNF333Q96JL9 665 aa24.05■■□□□ 1.44
CDKN2A-213ENST00000579122 EYA2O00167 538 aa24.04■■□□□ 1.44
CDKN2A-213ENST00000579122 RFX5P48382 616 aaPredicted RBP24.04■■□□□ 1.44
CDKN2A-213ENST00000579122 SNAPC2Q13487 334 aa24.04■■□□□ 1.44
CDKN2A-213ENST00000579122 DCAF15Q66K64 600 aa24.04■■□□□ 1.44
CDKN2A-213ENST00000579122 WDR66Q8TBY9 1149 aa24.04■■□□□ 1.44
CDKN2A-213ENST00000579122 LPIN2Q92539 896 aa24.04■■□□□ 1.44
CDKN2A-213ENST00000579122 ZKSCAN4Q969J2 545 aaPredicted RBP24.04■■□□□ 1.44
CDKN2A-213ENST00000579122 TLR2O60603 784 aa24.03■■□□□ 1.44
CDKN2A-213ENST00000579122 SLC5A1P13866 664 aa24.03■■□□□ 1.44
CDKN2A-213ENST00000579122 EN2P19622 333 aaPredicted RBP24.03■■□□□ 1.44
CDKN2A-213ENST00000579122 PPIL2Q13356 520 aa24.03■■□□□ 1.44
CDKN2A-213ENST00000579122 NBPF11Q86T75 865 aa24.03■■□□□ 1.44
CDKN2A-213ENST00000579122 TMEM106CQ9BVX2 250 aa24.03■■□□□ 1.44
CDKN2A-213ENST00000579122 PTCH2Q9Y6C5 1203 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms