RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 TRIM6-TRIM34B2RNG4 842 aa13.67□□□□□ -0.22
CDK5RAP3-210ENST00000578733 GOLIM4O00461 696 aa13.67□□□□□ -0.22
CDK5RAP3-210ENST00000578733 LDHBP07195 334 aaKnown RBP13.67□□□□□ -0.22
CDK5RAP3-210ENST00000578733 VIL1P09327 827 aaKnown RBP13.67□□□□□ -0.22
CDK5RAP3-210ENST00000578733 LMOD1P29536 600 aaPredicted RBP13.67□□□□□ -0.22
CDK5RAP3-210ENST00000578733 MAP3K12Q12852 859 aa13.67□□□□□ -0.22
CDK5RAP3-210ENST00000578733 DACT2Q5SW24 774 aa13.67□□□□□ -0.22
CDK5RAP3-210ENST00000578733 TTC22Q5TAA0 569 aa13.67□□□□□ -0.22
CDK5RAP3-210ENST00000578733 TSHZ3Q63HK5 1081 aa13.67□□□□□ -0.22
CDK5RAP3-210ENST00000578733 OGFOD1Q8N543 542 aa13.67□□□□□ -0.22
CDK5RAP3-210ENST00000578733 ZNF541Q9H0D2 1346 aa13.66□□□□□ -0.22
CDK5RAP3-210ENST00000578733 VEGFAP15692 232 aaPredicted RBP13.66□□□□□ -0.22
CDK5RAP3-210ENST00000578733 GSTO1P78417 241 aa13.66□□□□□ -0.22
CDK5RAP3-210ENST00000578733 SCARF1Q14162 830 aa13.66□□□□□ -0.22
CDK5RAP3-210ENST00000578733 TICAM2Q86XR7 235 aa13.66□□□□□ -0.22
CDK5RAP3-210ENST00000578733 DZIP1Q86YF9 867 aaKnown RBP13.66□□□□□ -0.22
CDK5RAP3-210ENST00000578733 EVI5LQ96CN4 794 aa13.66□□□□□ -0.22
CDK5RAP3-210ENST00000578733 RAI14Q9P0K7 980 aa13.66□□□□□ -0.22
CDK5RAP3-210ENST00000578733 JAG2Q9Y219 1238 aa13.66□□□□□ -0.22
CDK5RAP3-210ENST00000578733 GLTPD2A6NH11 291 aa13.65□□□□□ -0.22
CDK5RAP3-210ENST00000578733 IDH1O75874 414 aaKnown RBP13.65□□□□□ -0.22
CDK5RAP3-210ENST00000578733 CYP2E1P05181 493 aaPredicted RBP13.65□□□□□ -0.22
CDK5RAP3-210ENST00000578733 LDHCP07864 332 aa13.65□□□□□ -0.22
CDK5RAP3-210ENST00000578733 PI16Q6UXB8 463 aa13.65□□□□□ -0.22
CDK5RAP3-210ENST00000578733 DPF2Q92785 391 aa13.65□□□□□ -0.22
CDK5RAP3-210ENST00000578733 RILPL2Q969X0 211 aa13.65□□□□□ -0.22
CDK5RAP3-210ENST00000578733 FSD1Q9BTV5 496 aa13.65□□□□□ -0.22
CDK5RAP3-210ENST00000578733 KCNQ5Q9NR82 932 aa13.65□□□□□ -0.22
CDK5RAP3-210ENST00000578733 TTF2Q9UNY4 1162 aaKnown RBP13.65□□□□□ -0.22
CDK5RAP3-210ENST00000578733 RFX7Q2KHR2 1363 aa13.65□□□□□ -0.22
CDK5RAP3-210ENST00000578733 H7C1D1 291 aa13.64□□□□□ -0.23
CDK5RAP3-210ENST00000578733 HIP1O00291 1037 aa13.64□□□□□ -0.23
CDK5RAP3-210ENST00000578733 ZFYP08048 801 aaPredicted RBP13.64□□□□□ -0.23
CDK5RAP3-210ENST00000578733 USP17L8P0C7I0 530 aa13.64□□□□□ -0.23
CDK5RAP3-210ENST00000578733 KBTBD3Q8NAB2 608 aa13.64□□□□□ -0.23
CDK5RAP3-210ENST00000578733 NOL10Q9BSC4 688 aaKnown RBP13.64□□□□□ -0.23
CDK5RAP3-210ENST00000578733 CDK5RAP2Q96SN8 1893 aa13.63□□□□□ -0.23
CDK5RAP3-210ENST00000578733 FOCADQ5VW36 1801 aa13.63□□□□□ -0.23
CDK5RAP3-210ENST00000578733 IQCA1LA6NCM1 817 aa13.63□□□□□ -0.23
CDK5RAP3-210ENST00000578733 F8W031 263 aaPredicted RBP13.63□□□□□ -0.23
CDK5RAP3-210ENST00000578733 MAP4K4O95819 1239 aaPredicted RBP13.63□□□□□ -0.23
CDK5RAP3-210ENST00000578733 GMPSP49915 693 aaPredicted RBP13.63□□□□□ -0.23
CDK5RAP3-210ENST00000578733 HDLBPQ00341 1268 aaKnown RBP13.63□□□□□ -0.23
CDK5RAP3-210ENST00000578733 BMP2KLQ5H9B9 411 aa13.63□□□□□ -0.23
CDK5RAP3-210ENST00000578733 TBC1D9Q6ZT07 1266 aa13.63□□□□□ -0.23
CDK5RAP3-210ENST00000578733 KIAA0825Q8IV33 1275 aa13.63□□□□□ -0.23
CDK5RAP3-210ENST00000578733 NDUFB9Q9Y6M9 179 aa13.63□□□□□ -0.23
CDK5RAP3-210ENST00000578733 ADAMTSL1Q8N6G6 1762 aa13.63□□□□□ -0.23
CDK5RAP3-210ENST00000578733 DDNO94850 711 aaPredicted RBP13.62□□□□□ -0.23
CDK5RAP3-210ENST00000578733 PRDX5P30044 214 aa13.62□□□□□ -0.23
CDK5RAP3-210ENST00000578733 RBM5P52756 815 aaKnown RBP eCLIP13.62□□□□□ -0.23
CDK5RAP3-210ENST00000578733 NAA16Q6N069 864 aaPredicted RBP13.62□□□□□ -0.23
CDK5RAP3-210ENST00000578733 CASC1Q6TDU7 716 aa13.62□□□□□ -0.23
CDK5RAP3-210ENST00000578733 CERS3Q8IU89 383 aa13.62□□□□□ -0.23
CDK5RAP3-210ENST00000578733 TEKT1Q969V4 418 aa13.62□□□□□ -0.23
CDK5RAP3-210ENST00000578733 MRIQ9BWK5 157 aa13.62□□□□□ -0.23
CDK5RAP3-210ENST00000578733 ANTXR1Q9H6X2 564 aa13.62□□□□□ -0.23
CDK5RAP3-210ENST00000578733 PIH1D3Q9NQM4 214 aaKnown RBP13.62□□□□□ -0.23
CDK5RAP3-210ENST00000578733 SERPINA10Q9UK55 444 aa13.62□□□□□ -0.23
CDK5RAP3-210ENST00000578733 ZBTB12Q9Y330 459 aaPredicted RBP13.62□□□□□ -0.23
CDK5RAP3-210ENST00000578733 BAG3O95817 575 aa13.61□□□□□ -0.23
CDK5RAP3-210ENST00000578733 SLC9C2Q5TAH2 1124 aa13.61□□□□□ -0.23
CDK5RAP3-210ENST00000578733 HHIPL2Q6UWX4 724 aa13.61□□□□□ -0.23
CDK5RAP3-210ENST00000578733 CERS5Q8N5B7 392 aa13.61□□□□□ -0.23
CDK5RAP3-210ENST00000578733 MAGEB6Q8N7X4 407 aa13.61□□□□□ -0.23
CDK5RAP3-210ENST00000578733 NSUN4Q96CB9 384 aaKnown RBP13.61□□□□□ -0.23
CDK5RAP3-210ENST00000578733 L3MBTL3Q96JM7 780 aaPredicted RBP13.61□□□□□ -0.23
CDK5RAP3-210ENST00000578733 MXD3Q9BW11 206 aa13.61□□□□□ -0.23
CDK5RAP3-210ENST00000578733 GPRC5DQ9NZD1 345 aa13.61□□□□□ -0.23
CDK5RAP3-210ENST00000578733 CNOT7Q9UIV1 285 aaKnown RBP13.61□□□□□ -0.23
CDK5RAP3-210ENST00000578733 HACL1Q9UJ83 578 aa13.61□□□□□ -0.23
CDK5RAP3-210ENST00000578733 POLR2AP24928 1970 aaKnown RBP13.61□□□□□ -0.23
CDK5RAP3-210ENST00000578733 MYH1P12882 1939 aa13.6□□□□□ -0.23
CDK5RAP3-210ENST00000578733 MYO1BO43795 1136 aa13.6□□□□□ -0.23
CDK5RAP3-210ENST00000578733 MECOMQ03112 1051 aa13.6□□□□□ -0.23
CDK5RAP3-210ENST00000578733 DLGAP5Q15398 846 aa13.6□□□□□ -0.23
CDK5RAP3-210ENST00000578733 MICALL2Q8IY33 904 aa13.6□□□□□ -0.23
CDK5RAP3-210ENST00000578733 EDC3Q96F86 508 aaKnown RBP13.6□□□□□ -0.23
CDK5RAP3-210ENST00000578733 GMLQ99445 158 aa13.6□□□□□ -0.23
CDK5RAP3-210ENST00000578733 DIAPH3Q9NSV4 1193 aa13.6□□□□□ -0.23
CDK5RAP3-210ENST00000578733 MROH7-TTC4A0A0A0MT08 1334 aa13.6□□□□□ -0.23
CDK5RAP3-210ENST00000578733 NAV1Q8NEY1 1877 aa13.59□□□□□ -0.23
CDK5RAP3-210ENST00000578733 RNF113AO15541 343 aaKnown RBP13.59□□□□□ -0.23
CDK5RAP3-210ENST00000578733 GSPT1P15170 499 aaKnown RBP13.59□□□□□ -0.23
CDK5RAP3-210ENST00000578733 PDE6AP16499 860 aa13.59□□□□□ -0.23
CDK5RAP3-210ENST00000578733 PLCG2P16885 1265 aa13.59□□□□□ -0.23
CDK5RAP3-210ENST00000578733 SDSP20132 328 aa13.59□□□□□ -0.23
CDK5RAP3-210ENST00000578733 CYP7A1P22680 504 aa13.59□□□□□ -0.23
CDK5RAP3-210ENST00000578733 ADD2P35612 726 aa13.59□□□□□ -0.23
CDK5RAP3-210ENST00000578733 CRKP46108 304 aa13.59□□□□□ -0.23
CDK5RAP3-210ENST00000578733 SCNN1DP51172 638 aa13.59□□□□□ -0.23
CDK5RAP3-210ENST00000578733 ZNF280AP59817 542 aaPredicted RBP13.59□□□□□ -0.23
CDK5RAP3-210ENST00000578733 UBE3CQ15386 1083 aa13.59□□□□□ -0.23
CDK5RAP3-210ENST00000578733 MYOZ2Q9NPC6 264 aa13.59□□□□□ -0.23
CDK5RAP3-210ENST00000578733 ADARB2Q9NS39 739 aaKnown RBP13.59□□□□□ -0.23
CDK5RAP3-210ENST00000578733 MYH8P13535 1937 aa13.58□□□□□ -0.23
CDK5RAP3-210ENST00000578733 EIF5BO60841 1220 aaKnown RBP13.58□□□□□ -0.24
CDK5RAP3-210ENST00000578733 MFAP1P55081 439 aaKnown RBP13.58□□□□□ -0.24
CDK5RAP3-210ENST00000578733 CFAP100Q494V2 611 aa13.58□□□□□ -0.24
CDK5RAP3-210ENST00000578733 PNMA8AQ86V59 439 aaPredicted RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms