RNA–Protein interactions for RNA: ENST00000578600.1

PTPRM-208, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 2

Gene PTPRM, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-208ENST00000578600 PLA2R1Q13018 1463 aa8.15□□□□□ -1.1
PTPRM-208ENST00000578600 FMN1Q68DA7 1419 aa8.15□□□□□ -1.1
PTPRM-208ENST00000578600 MAP2K3P46734 347 aa8.15□□□□□ -1.1
PTPRM-208ENST00000578600 PTPN12Q05209 780 aaKnown RBP8.15□□□□□ -1.1
PTPRM-208ENST00000578600 HHIPQ96QV1 700 aa8.15□□□□□ -1.1
PTPRM-208ENST00000578600 PBX4Q9BYU1 374 aa8.15□□□□□ -1.1
PTPRM-208ENST00000578600 TGIF2Q9GZN2 237 aa8.15□□□□□ -1.1
PTPRM-208ENST00000578600 RASSF4Q9H2L5 321 aa8.15□□□□□ -1.1
PTPRM-208ENST00000578600 IGFLR1Q9H665 355 aa8.15□□□□□ -1.1
PTPRM-208ENST00000578600 SLC6A14Q9UN76 642 aa8.15□□□□□ -1.1
PTPRM-208ENST00000578600 REREQ9P2R6 1566 aa8.14□□□□□ -1.11
PTPRM-208ENST00000578600 ZMYM3Q14202 1370 aa8.14□□□□□ -1.11
PTPRM-208ENST00000578600 XRCC5P13010 732 aaKnown RBP8.14□□□□□ -1.11
PTPRM-208ENST00000578600 ADH6P28332 368 aa8.14□□□□□ -1.11
PTPRM-208ENST00000578600 GRIA4P48058 902 aa8.14□□□□□ -1.11
PTPRM-208ENST00000578600 FCGRTP55899 365 aa8.14□□□□□ -1.11
PTPRM-208ENST00000578600 ATP11AP98196 1134 aa8.14□□□□□ -1.11
PTPRM-208ENST00000578600 RNFT1Q5M7Z0 435 aa8.14□□□□□ -1.11
PTPRM-208ENST00000578600 FCHSD1Q86WN1 690 aa8.14□□□□□ -1.11
PTPRM-208ENST00000578600 SPACA7Q96KW9 195 aa8.14□□□□□ -1.11
PTPRM-208ENST00000578600 SAMD9Q5K651 1589 aa8.14□□□□□ -1.11
PTPRM-208ENST00000578600 ERBB4Q15303 1308 aa8.13□□□□□ -1.11
PTPRM-208ENST00000578600 ZNF335Q9H4Z2 1342 aaPredicted RBP8.13□□□□□ -1.11
PTPRM-208ENST00000578600 TERTO14746 1132 aaKnown RBP8.13□□□□□ -1.11
PTPRM-208ENST00000578600 ITPKAP23677 461 aa8.13□□□□□ -1.11
PTPRM-208ENST00000578600 HSPA1LP34931 641 aa8.13□□□□□ -1.11
PTPRM-208ENST00000578600 GNL2Q13823 731 aaKnown RBP8.13□□□□□ -1.11
PTPRM-208ENST00000578600 ZNF787Q6DD87 383 aa8.13□□□□□ -1.11
PTPRM-208ENST00000578600 COL25A1Q9BXS0 654 aaPredicted RBP8.13□□□□□ -1.11
PTPRM-208ENST00000578600 OXCT2Q9BYC2 517 aaPredicted RBP8.13□□□□□ -1.11
PTPRM-208ENST00000578600 NAGPAQ9UK23 515 aa8.13□□□□□ -1.11
PTPRM-208ENST00000578600 NSFL1CQ9UNZ2 370 aaKnown RBP8.13□□□□□ -1.11
PTPRM-208ENST00000578600 PDE2AO00408 941 aaPredicted RBP8.12□□□□□ -1.11
PTPRM-208ENST00000578600 GHRHP01286 108 aa8.12□□□□□ -1.11
PTPRM-208ENST00000578600 ADH7P40394 386 aa8.12□□□□□ -1.11
PTPRM-208ENST00000578600 PIP4K2BP78356 416 aa8.12□□□□□ -1.11
PTPRM-208ENST00000578600 MAP3K10Q02779 954 aa8.12□□□□□ -1.11
PTPRM-208ENST00000578600 TBC1D8BQ0IIM8 1120 aa8.12□□□□□ -1.11
PTPRM-208ENST00000578600 NFX1Q12986 1120 aaKnown RBP8.12□□□□□ -1.11
PTPRM-208ENST00000578600 SPRED3Q2MJR0 410 aa8.12□□□□□ -1.11
PTPRM-208ENST00000578600 PERM1Q5SV97 790 aa8.12□□□□□ -1.11
PTPRM-208ENST00000578600 FAM35AQ86V20 835 aa8.12□□□□□ -1.11
PTPRM-208ENST00000578600 ANKLE2Q86XL3 938 aa8.12□□□□□ -1.11
PTPRM-208ENST00000578600 THEMISQ8N1K5 641 aaPredicted RBP8.12□□□□□ -1.11
PTPRM-208ENST00000578600 POP1Q99575 1024 aaKnown RBP8.12□□□□□ -1.11
PTPRM-208ENST00000578600 CAPN10Q9HC96 672 aa8.12□□□□□ -1.11
PTPRM-208ENST00000578600 GGA1Q9UJY5 639 aa8.12□□□□□ -1.11
PTPRM-208ENST00000578600 PPM1HQ9ULR3 514 aa8.12□□□□□ -1.11
PTPRM-208ENST00000578600 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.12□□□□□ -1.11
PTPRM-208ENST00000578600 NEURL1BA8MQ27 555 aa8.11□□□□□ -1.11
PTPRM-208ENST00000578600 METTL12A8MUP2 240 aa8.11□□□□□ -1.11
PTPRM-208ENST00000578600 CPB1P15086 417 aa8.11□□□□□ -1.11
PTPRM-208ENST00000578600 KRT76Q01546 638 aa8.11□□□□□ -1.11
PTPRM-208ENST00000578600 ADAMTSL4Q6UY14 1074 aa8.11□□□□□ -1.11
PTPRM-208ENST00000578600 HS2ST1Q7LGA3 356 aa8.11□□□□□ -1.11
PTPRM-208ENST00000578600 CPS1P31327 1500 aa8.11□□□□□ -1.11
PTPRM-208ENST00000578600 STRCQ7RTU9 1775 aa8.11□□□□□ -1.11
PTPRM-208ENST00000578600 ELOA3CA0A087WX78 387 aaPredicted RBP8.1□□□□□ -1.11
PTPRM-208ENST00000578600 A0A096LPE4 126 aa8.1□□□□□ -1.11
PTPRM-208ENST00000578600 A0A1W2PPZ6 126 aa8.1□□□□□ -1.11
PTPRM-208ENST00000578600 ELOA3DA6NLF2 546 aaPredicted RBP8.1□□□□□ -1.11
PTPRM-208ENST00000578600 EIF2AK2P19525 551 aaKnown RBP8.1□□□□□ -1.11
PTPRM-208ENST00000578600 ELOA3BQ3SY89 546 aa8.1□□□□□ -1.11
PTPRM-208ENST00000578600 DTHD1Q6ZMT9 781 aa8.1□□□□□ -1.11
PTPRM-208ENST00000578600 ERMP1Q7Z2K6 904 aa8.1□□□□□ -1.11
PTPRM-208ENST00000578600 ZNF654Q8IZM8 581 aa8.1□□□□□ -1.11
PTPRM-208ENST00000578600 ELOA3Q8NG57 546 aa8.1□□□□□ -1.11
PTPRM-208ENST00000578600 UBXN4Q92575 508 aa8.1□□□□□ -1.11
PTPRM-208ENST00000578600 TTC9Q92623 222 aa8.1□□□□□ -1.11
PTPRM-208ENST00000578600 PLD4Q96BZ4 506 aa8.1□□□□□ -1.11
PTPRM-208ENST00000578600 LPIN3Q9BQK8 851 aa8.1□□□□□ -1.11
PTPRM-208ENST00000578600 NOC4LQ9BVI4 516 aaKnown RBP8.1□□□□□ -1.11
PTPRM-208ENST00000578600 RBSNQ9H1K0 784 aa8.1□□□□□ -1.11
PTPRM-208ENST00000578600 ZFYVE1Q9HBF4 777 aa8.1□□□□□ -1.11
PTPRM-208ENST00000578600 FRRS1LQ9P0K9 344 aa8.1□□□□□ -1.11
PTPRM-208ENST00000578600 GGT7Q9UJ14 662 aa8.1□□□□□ -1.11
PTPRM-208ENST00000578600 ARHGAP5Q13017 1502 aa8.09□□□□□ -1.11
PTPRM-208ENST00000578600 SPAG9O60271 1321 aaKnown RBP8.09□□□□□ -1.11
PTPRM-208ENST00000578600 SRSF11Q05519 484 aaKnown RBP8.09□□□□□ -1.11
PTPRM-208ENST00000578600 SLCO4C1Q6ZQN7 724 aa8.09□□□□□ -1.11
PTPRM-208ENST00000578600 USP48Q86UV5 1035 aa8.09□□□□□ -1.11
PTPRM-208ENST00000578600 ACBD3Q9H3P7 528 aa8.09□□□□□ -1.11
PTPRM-208ENST00000578600 SRA1Q9HD15 236 aaKnown RBP8.09□□□□□ -1.11
PTPRM-208ENST00000578600 DDX41Q9UJV9 622 aaKnown RBP8.09□□□□□ -1.11
PTPRM-208ENST00000578600 AKAP2Q9Y2D5 859 aa8.09□□□□□ -1.11
PTPRM-208ENST00000578600 TROQ12816 1431 aaPredicted RBP8.09□□□□□ -1.11
PTPRM-208ENST00000578600 KDM5CP41229 1560 aa8.09□□□□□ -1.11
PTPRM-208ENST00000578600 CAMSAP1Q5T5Y3 1602 aa8.08□□□□□ -1.12
PTPRM-208ENST00000578600 SMNDC1O75940 238 aaKnown RBP eCLIP8.08□□□□□ -1.12
PTPRM-208ENST00000578600 RACK1P63244 317 aaKnown RBP8.08□□□□□ -1.12
PTPRM-208ENST00000578600 RPS26P11Q5JNZ5 115 aaPredicted RBP8.08□□□□□ -1.12
PTPRM-208ENST00000578600 CEP135Q66GS9 1140 aa8.08□□□□□ -1.12
PTPRM-208ENST00000578600 GOLGA6L1Q8N7Z2 621 aa8.08□□□□□ -1.12
PTPRM-208ENST00000578600 SLC16A10Q8TF71 515 aa8.08□□□□□ -1.12
PTPRM-208ENST00000578600 TINF2Q9BSI4 451 aa8.08□□□□□ -1.12
PTPRM-208ENST00000578600 TANGO6Q9C0B7 1094 aa8.08□□□□□ -1.12
PTPRM-208ENST00000578600 ADAM19Q9H013 955 aa8.08□□□□□ -1.12
PTPRM-208ENST00000578600 SMG9Q9H0W8 520 aaKnown RBP8.08□□□□□ -1.12
PTPRM-208ENST00000578600 MUC3BQ9H195 1237 aa8.08□□□□□ -1.12
PTPRM-208ENST00000578600 ZNF576Q9H609 170 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms