RNA–Protein interactions for RNA: ENST00000578357.5

CUEDC1-208, Transcript of CUE domain containing 1, humanhuman

TSL 3

Gene CUEDC1, Length 661 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-208ENST00000578357 CCL15Q16663 113 aa12.66□□□□□ -0.38
CUEDC1-208ENST00000578357 BRI3BPQ8WY22 251 aa12.66□□□□□ -0.38
CUEDC1-208ENST00000578357 ZNF594Q96JF6 807 aaPredicted RBP12.66□□□□□ -0.38
CUEDC1-208ENST00000578357 ZNF646O15015 1829 aaPredicted RBP12.66□□□□□ -0.38
CUEDC1-208ENST00000578357 AOX1Q06278 1338 aa12.65□□□□□ -0.38
CUEDC1-208ENST00000578357 TCP10L2B9ZVM9 353 aa12.65□□□□□ -0.38
CUEDC1-208ENST00000578357 VAMP4O75379 141 aa12.65□□□□□ -0.38
CUEDC1-208ENST00000578357 VGLL4Q14135 290 aa12.65□□□□□ -0.38
CUEDC1-208ENST00000578357 NCBP3Q53F19 620 aaKnown RBP12.65□□□□□ -0.38
CUEDC1-208ENST00000578357 BEND3Q5T5X7 828 aa12.65□□□□□ -0.38
CUEDC1-208ENST00000578357 FAM84BQ96KN1 310 aaPredicted RBP12.65□□□□□ -0.38
CUEDC1-208ENST00000578357 TEPSINQ96N21 525 aa12.65□□□□□ -0.38
CUEDC1-208ENST00000578357 TMEM39BQ9GZU3 492 aa12.65□□□□□ -0.38
CUEDC1-208ENST00000578357 SPINK5Q9NQ38 1064 aaPredicted RBP12.65□□□□□ -0.38
CUEDC1-208ENST00000578357 C9orf78Q9NZ63 289 aaPredicted RBP12.65□□□□□ -0.38
CUEDC1-208ENST00000578357 PTCH2Q9Y6C5 1203 aa12.65□□□□□ -0.38
CUEDC1-208ENST00000578357 GRM8O00222 908 aa12.64□□□□□ -0.39
CUEDC1-208ENST00000578357 GNRH1P01148 92 aa12.64□□□□□ -0.39
CUEDC1-208ENST00000578357 CETPP11597 493 aa12.64□□□□□ -0.39
CUEDC1-208ENST00000578357 CRKP46108 304 aa12.64□□□□□ -0.39
CUEDC1-208ENST00000578357 GYG1P46976 350 aa12.64□□□□□ -0.39
CUEDC1-208ENST00000578357 FXR1P51114 621 aaKnown RBP eCLIP12.64□□□□□ -0.39
CUEDC1-208ENST00000578357 HDLBPQ00341 1268 aaKnown RBP12.64□□□□□ -0.39
CUEDC1-208ENST00000578357 CAP1Q01518 475 aa12.64□□□□□ -0.39
CUEDC1-208ENST00000578357 VPS37DQ86XT2 251 aa12.64□□□□□ -0.39
CUEDC1-208ENST00000578357 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.64□□□□□ -0.39
CUEDC1-208ENST00000578357 CNKSR2Q8WXI2 1034 aa12.64□□□□□ -0.39
CUEDC1-208ENST00000578357 HOOK2Q96ED9 719 aa12.64□□□□□ -0.39
CUEDC1-208ENST00000578357 OTUD5Q96G74 571 aa12.64□□□□□ -0.39
CUEDC1-208ENST00000578357 COLQQ9Y215 455 aaPredicted RBP12.64□□□□□ -0.39
CUEDC1-208ENST00000578357 F6X3S4 739 aa12.63□□□□□ -0.39
CUEDC1-208ENST00000578357 TLR2O60603 784 aa12.63□□□□□ -0.39
CUEDC1-208ENST00000578357 EPHA10Q5JZY3 1008 aa12.63□□□□□ -0.39
CUEDC1-208ENST00000578357 ERO1BQ86YB8 467 aa12.63□□□□□ -0.39
CUEDC1-208ENST00000578357 FAM43AQ8N2R8 423 aa12.63□□□□□ -0.39
CUEDC1-208ENST00000578357 ZCCHC17Q9NP64 241 aaKnown RBP12.63□□□□□ -0.39
CUEDC1-208ENST00000578357 FANCIQ9NVI1 1328 aa12.62□□□□□ -0.39
CUEDC1-208ENST00000578357 SPDYE5A6NIY4 337 aa12.62□□□□□ -0.39
CUEDC1-208ENST00000578357 FRAT2O75474 233 aaPredicted RBP12.62□□□□□ -0.39
CUEDC1-208ENST00000578357 PRMT2P55345 433 aa12.62□□□□□ -0.39
CUEDC1-208ENST00000578357 SNAPC2Q13487 334 aa12.62□□□□□ -0.39
CUEDC1-208ENST00000578357 CAVIN4Q5BKX8 364 aa12.62□□□□□ -0.39
CUEDC1-208ENST00000578357 WDR63Q8IWG1 891 aa12.62□□□□□ -0.39
CUEDC1-208ENST00000578357 TBC1D22AQ8WUA7 517 aa12.62□□□□□ -0.39
CUEDC1-208ENST00000578357 MRIQ9BWK5 157 aa12.62□□□□□ -0.39
CUEDC1-208ENST00000578357 MROH5Q6ZUA9 1318 aa12.62□□□□□ -0.39
CUEDC1-208ENST00000578357 ALDH1L1O75891 902 aa12.61□□□□□ -0.39
CUEDC1-208ENST00000578357 MYCP01106 439 aaPredicted RBP12.61□□□□□ -0.39
CUEDC1-208ENST00000578357 LACTBP83111 547 aaPredicted RBP12.61□□□□□ -0.39
CUEDC1-208ENST00000578357 EXOSC9Q06265 439 aaKnown RBP12.61□□□□□ -0.39
CUEDC1-208ENST00000578357 FBXO33Q7Z6M2 555 aa12.61□□□□□ -0.39
CUEDC1-208ENST00000578357 CDAN1Q8IWY9 1227 aa12.61□□□□□ -0.39
CUEDC1-208ENST00000578357 TEKT1Q969V4 418 aa12.61□□□□□ -0.39
CUEDC1-208ENST00000578357 TMOD2Q9NZR1 351 aa12.61□□□□□ -0.39
CUEDC1-208ENST00000578357 BRCA2P51587 3418 aa12.6□□□□□ -0.39
CUEDC1-208ENST00000578357 BTBD19C9JJ37 291 aa12.6□□□□□ -0.39
CUEDC1-208ENST00000578357 H0YGN5 161 aa12.6□□□□□ -0.39
CUEDC1-208ENST00000578357 IRF6O14896 467 aa12.6□□□□□ -0.39
CUEDC1-208ENST00000578357 HOXD10P28358 340 aa12.6□□□□□ -0.39
CUEDC1-208ENST00000578357 FKBP1CQ5VVH2 108 aa12.6□□□□□ -0.39
CUEDC1-208ENST00000578357 FAM83AQ86UY5 434 aa12.6□□□□□ -0.39
CUEDC1-208ENST00000578357 SH3TC2Q8TF17 1288 aa12.6□□□□□ -0.39
CUEDC1-208ENST00000578357 ZKSCAN4Q969J2 545 aaPredicted RBP12.6□□□□□ -0.39
CUEDC1-208ENST00000578357 WRNIP1Q96S55 665 aa12.6□□□□□ -0.39
CUEDC1-208ENST00000578357 PUS3Q9BZE2 481 aaKnown RBP12.6□□□□□ -0.39
CUEDC1-208ENST00000578357 SRCIN1Q9C0H9 1055 aa12.6□□□□□ -0.39
CUEDC1-208ENST00000578357 RIPOR2Q9Y4F9 1068 aa12.6□□□□□ -0.39
CUEDC1-208ENST00000578357 PPATQ06203 517 aa12.59□□□□□ -0.39
CUEDC1-208ENST00000578357 CHAF1AQ13111 956 aaPredicted RBP12.59□□□□□ -0.39
CUEDC1-208ENST00000578357 PPIL2Q13356 520 aa12.59□□□□□ -0.39
CUEDC1-208ENST00000578357 DCAF15Q66K64 600 aa12.59□□□□□ -0.39
CUEDC1-208ENST00000578357 SLC4A10Q6U841 1118 aa12.59□□□□□ -0.39
CUEDC1-208ENST00000578357 NKX2-3Q8TAU0 364 aa12.59□□□□□ -0.39
CUEDC1-208ENST00000578357 DPF3Q92784 378 aa12.59□□□□□ -0.39
CUEDC1-208ENST00000578357 ZDHHC15Q96MV8 337 aa12.59□□□□□ -0.39
CUEDC1-208ENST00000578357 ARHGAP39Q9C0H5 1083 aa12.59□□□□□ -0.39
CUEDC1-208ENST00000578357 IQSEC3Q9UPP2 1182 aaPredicted RBP12.59□□□□□ -0.39
CUEDC1-208ENST00000578357 CACNA1FO60840 1977 aa12.59□□□□□ -0.39
CUEDC1-208ENST00000578357 ECM29Q5VYK3 1845 aa12.58□□□□□ -0.4
CUEDC1-208ENST00000578357 CEP290O15078 2479 aa12.58□□□□□ -0.4
CUEDC1-208ENST00000578357 CACNB3P54284 484 aa12.58□□□□□ -0.4
CUEDC1-208ENST00000578357 GRIK5Q16478 980 aa12.58□□□□□ -0.4
CUEDC1-208ENST00000578357 C17orf99Q6UX52 265 aa12.58□□□□□ -0.4
CUEDC1-208ENST00000578357 SUGT1Q9Y2Z0 365 aa12.58□□□□□ -0.4
CUEDC1-208ENST00000578357 SNCAIPQ9Y6H5 919 aa12.58□□□□□ -0.4
CUEDC1-208ENST00000578357 LAMB1P07942 1786 aa12.58□□□□□ -0.4
CUEDC1-208ENST00000578357 RBBP6Q7Z6E9 1792 aaKnown RBP12.58□□□□□ -0.4
CUEDC1-208ENST00000578357 PSMC4P43686 418 aa12.57□□□□□ -0.4
CUEDC1-208ENST00000578357 METTL24Q5JXM2 366 aa12.57□□□□□ -0.4
CUEDC1-208ENST00000578357 APOBEC3HQ6NTF7 200 aaKnown RBP12.57□□□□□ -0.4
CUEDC1-208ENST00000578357 HHIPL2Q6UWX4 724 aa12.57□□□□□ -0.4
CUEDC1-208ENST00000578357 SUCLG2Q96I99 432 aa12.57□□□□□ -0.4
CUEDC1-208ENST00000578357 ZNF341Q9BYN7 854 aa12.57□□□□□ -0.4
CUEDC1-208ENST00000578357 SRRDQ9UH36 339 aa12.57□□□□□ -0.4
CUEDC1-208ENST00000578357 MAST3O60307 1309 aa12.57□□□□□ -0.4
CUEDC1-208ENST00000578357 PDE8BO95263 885 aa12.56□□□□□ -0.4
CUEDC1-208ENST00000578357 FMNL1O95466 1100 aaPredicted RBP12.56□□□□□ -0.4
CUEDC1-208ENST00000578357 BCAMP50895 628 aa12.56□□□□□ -0.4
CUEDC1-208ENST00000578357 MIGA2Q7L4E1 593 aa12.56□□□□□ -0.4
CUEDC1-208ENST00000578357 ANKRD23Q86SG2 305 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms