RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-209	ENST00000578329	KIAA0100	Q14667	2235 aa	Known RBP	5.64	□□□□□ -1.51
PPP4R1-209	ENST00000578329	ADORA1	P30542	326 aa		5.64	□□□□□ -1.51
PPP4R1-209	ENST00000578329	HIBADH	P31937	336 aa	Known RBP	5.64	□□□□□ -1.51
PPP4R1-209	ENST00000578329	CRK	P46108	304 aa		5.64	□□□□□ -1.51
PPP4R1-209	ENST00000578329	NFIA	Q12857	509 aa		5.64	□□□□□ -1.51
PPP4R1-209	ENST00000578329	CCDC57	Q2TAC2	916 aa		5.64	□□□□□ -1.51
PPP4R1-209	ENST00000578329	SH3BP5L	Q7L8J4	393 aa		5.64	□□□□□ -1.51
PPP4R1-209	ENST00000578329	ZNF804A	Q7Z570	1209 aa		5.64	□□□□□ -1.51
PPP4R1-209	ENST00000578329	APOBEC3F	Q8IUX4	373 aa	Known RBP	5.64	□□□□□ -1.51
PPP4R1-209	ENST00000578329	FAM43A	Q8N2R8	423 aa		5.64	□□□□□ -1.51
PPP4R1-209	ENST00000578329	OGFOD1	Q8N543	542 aa		5.64	□□□□□ -1.51
PPP4R1-209	ENST00000578329	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	5.64	□□□□□ -1.51
PPP4R1-209	ENST00000578329	MEIS3	Q99687	375 aa		5.64	□□□□□ -1.51
PPP4R1-209	ENST00000578329	CHMP4A	Q9BY43	222 aa		5.64	□□□□□ -1.51
PPP4R1-209	ENST00000578329	CNNM1	Q9NRU3	951 aa		5.64	□□□□□ -1.51
PPP4R1-209	ENST00000578329	SERPINA10	Q9UK55	444 aa		5.64	□□□□□ -1.51
PPP4R1-209	ENST00000578329	TTF2	Q9UNY4	1162 aa	Known RBP	5.64	□□□□□ -1.51
PPP4R1-209	ENST00000578329	PA2G4	Q9UQ80	394 aa	Known RBP	5.64	□□□□□ -1.51
PPP4R1-209	ENST00000578329	CHMP3	Q9Y3E7	222 aa		5.64	□□□□□ -1.51
PPP4R1-209	ENST00000578329	SNCAIP	Q9Y6H5	919 aa		5.64	□□□□□ -1.51
PPP4R1-209	ENST00000578329	RBBP6	Q7Z6E9	1792 aa	Known RBP	5.63	□□□□□ -1.51
PPP4R1-209	ENST00000578329	POTEF	A5A3E0	1075 aa		5.63	□□□□□ -1.51
PPP4R1-209	ENST00000578329	TCP10L2	B9ZVM9	353 aa		5.63	□□□□□ -1.51
PPP4R1-209	ENST00000578329	EYA2	O00167	538 aa		5.63	□□□□□ -1.51
PPP4R1-209	ENST00000578329	PHKA1	P46020	1223 aa		5.63	□□□□□ -1.51
PPP4R1-209	ENST00000578329	MMP14	P50281	582 aa		5.63	□□□□□ -1.51
PPP4R1-209	ENST00000578329	MLLT1	Q03111	559 aa	Predicted RBP	5.63	□□□□□ -1.51
PPP4R1-209	ENST00000578329	CRHR2	Q13324	411 aa		5.63	□□□□□ -1.51
PPP4R1-209	ENST00000578329	VGLL4	Q14135	290 aa		5.63	□□□□□ -1.51
PPP4R1-209	ENST00000578329	DIXDC1	Q155Q3	683 aa		5.63	□□□□□ -1.51
PPP4R1-209	ENST00000578329	OTOP1	Q7RTM1	612 aa		5.63	□□□□□ -1.51
PPP4R1-209	ENST00000578329	ZDHHC15	Q96MV8	337 aa		5.63	□□□□□ -1.51
PPP4R1-209	ENST00000578329	C9orf78	Q9NZ63	289 aa	Predicted RBP	5.63	□□□□□ -1.51
PPP4R1-209	ENST00000578329	FAM198A	Q9UFP1	575 aa		5.63	□□□□□ -1.51
PPP4R1-209	ENST00000578329	NOB1	Q9ULX3	412 aa	Known RBP	5.63	□□□□□ -1.51
PPP4R1-209	ENST00000578329	PTPRC	P08575	1304 aa		5.63	□□□□□ -1.51
PPP4R1-209	ENST00000578329	ADGRA2	Q96PE1	1338 aa		5.63	□□□□□ -1.51
PPP4R1-209	ENST00000578329	SIPA1L1	O43166	1804 aa		5.62	□□□□□ -1.51
PPP4R1-209	ENST00000578329	PHIP	Q8WWQ0	1821 aa		5.62	□□□□□ -1.51
PPP4R1-209	ENST00000578329		E9PSI1	815 aa		5.62	□□□□□ -1.51
PPP4R1-209	ENST00000578329	ZBTB22	O15209	634 aa		5.62	□□□□□ -1.51
PPP4R1-209	ENST00000578329	ZBTB48	P10074	688 aa	Predicted RBP	5.62	□□□□□ -1.51
PPP4R1-209	ENST00000578329	PRDX5	P30044	214 aa		5.62	□□□□□ -1.51
PPP4R1-209	ENST00000578329	INPP5B	P32019	993 aa		5.62	□□□□□ -1.51
PPP4R1-209	ENST00000578329	KCNJ4	P48050	445 aa		5.62	□□□□□ -1.51
PPP4R1-209	ENST00000578329	RARS	P54136	660 aa	Known RBP	5.62	□□□□□ -1.51
PPP4R1-209	ENST00000578329	HDLBP	Q00341	1268 aa	Known RBP	5.62	□□□□□ -1.51
PPP4R1-209	ENST00000578329	CHAF1A	Q13111	956 aa	Predicted RBP	5.62	□□□□□ -1.51
PPP4R1-209	ENST00000578329	RRP1B	Q14684	758 aa	Known RBP	5.62	□□□□□ -1.51
PPP4R1-209	ENST00000578329	ALDH1L2	Q3SY69	923 aa		5.62	□□□□□ -1.51
PPP4R1-209	ENST00000578329	PI16	Q6UXB8	463 aa		5.62	□□□□□ -1.51
PPP4R1-209	ENST00000578329	ZKSCAN4	Q969J2	545 aa	Predicted RBP	5.62	□□□□□ -1.51
PPP4R1-209	ENST00000578329	OPTN	Q96CV9	577 aa		5.62	□□□□□ -1.51
PPP4R1-209	ENST00000578329	MRI	Q9BWK5	157 aa		5.62	□□□□□ -1.51
PPP4R1-209	ENST00000578329	ARHGAP39	Q9C0H5	1083 aa		5.62	□□□□□ -1.51
PPP4R1-209	ENST00000578329	ELP3	Q9H9T3	547 aa		5.62	□□□□□ -1.51
PPP4R1-209	ENST00000578329	VEZT	Q9HBM0	779 aa		5.62	□□□□□ -1.51
PPP4R1-209	ENST00000578329	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	5.62	□□□□□ -1.51
PPP4R1-209	ENST00000578329	ZNF112	Q9UJU3	913 aa		5.62	□□□□□ -1.51
PPP4R1-209	ENST00000578329	HDAC9	Q9UKV0	1011 aa		5.62	□□□□□ -1.51
PPP4R1-209	ENST00000578329	DAGLA	Q9Y4D2	1042 aa		5.62	□□□□□ -1.51
PPP4R1-209	ENST00000578329	PPP2R3B	Q9Y5P8	575 aa		5.62	□□□□□ -1.51
PPP4R1-209	ENST00000578329	MROH5	Q6ZUA9	1318 aa		5.62	□□□□□ -1.51
PPP4R1-209	ENST00000578329	KIF16B	Q96L93	1317 aa		5.62	□□□□□ -1.51
PPP4R1-209	ENST00000578329	MANSC4	A6NHS7	340 aa	Predicted RBP	5.61	□□□□□ -1.51
PPP4R1-209	ENST00000578329	SPDYE5	A6NIY4	337 aa		5.61	□□□□□ -1.51
PPP4R1-209	ENST00000578329	UNCX	A6NJT0	531 aa		5.61	□□□□□ -1.51
PPP4R1-209	ENST00000578329	PHF20L1	A8MW92	1017 aa		5.61	□□□□□ -1.51
PPP4R1-209	ENST00000578329	IRF6	O14896	467 aa		5.61	□□□□□ -1.51
PPP4R1-209	ENST00000578329	CEP290	O15078	2479 aa		5.61	□□□□□ -1.51
PPP4R1-209	ENST00000578329	FKTN	O75072	461 aa		5.61	□□□□□ -1.51
PPP4R1-209	ENST00000578329	BCAR3	O75815	825 aa		5.61	□□□□□ -1.51
PPP4R1-209	ENST00000578329	PTPRF	P10586	1907 aa		5.61	□□□□□ -1.51
PPP4R1-209	ENST00000578329	ZEB1	P37275	1124 aa	Predicted RBP	5.61	□□□□□ -1.51
PPP4R1-209	ENST00000578329	JAG1	P78504	1218 aa		5.61	□□□□□ -1.51
PPP4R1-209	ENST00000578329	MTX1	Q13505	466 aa		5.61	□□□□□ -1.51
PPP4R1-209	ENST00000578329	RASGRF1	Q13972	1273 aa		5.61	□□□□□ -1.51
PPP4R1-209	ENST00000578329	TTLL12	Q14166	644 aa	Predicted RBP	5.61	□□□□□ -1.51
PPP4R1-209	ENST00000578329	METTL24	Q5JXM2	366 aa		5.61	□□□□□ -1.51
PPP4R1-209	ENST00000578329	INTS3	Q68E01	1043 aa	Known RBP	5.61	□□□□□ -1.51
PPP4R1-209	ENST00000578329	CDC42EP5	Q6NZY7	148 aa		5.61	□□□□□ -1.51
PPP4R1-209	ENST00000578329	FBXO46	Q6PJ61	603 aa	Predicted RBP	5.61	□□□□□ -1.51
PPP4R1-209	ENST00000578329	ARMC9	Q7Z3E5	817 aa		5.61	□□□□□ -1.51
PPP4R1-209	ENST00000578329	REM2	Q8IYK8	340 aa	Predicted RBP	5.61	□□□□□ -1.51
PPP4R1-209	ENST00000578329	CD99L2	Q8TCZ2	262 aa		5.61	□□□□□ -1.51
PPP4R1-209	ENST00000578329	SLC10A4	Q96EP9	437 aa		5.61	□□□□□ -1.51
PPP4R1-209	ENST00000578329	COPRS	Q9NQ92	184 aa		5.61	□□□□□ -1.51
PPP4R1-209	ENST00000578329	DDX4	Q9NQI0	724 aa	Known RBP	5.61	□□□□□ -1.51
PPP4R1-209	ENST00000578329	MYH13	Q9UKX3	1938 aa		5.61	□□□□□ -1.51
PPP4R1-209	ENST00000578329	MYO5A	Q9Y4I1	1855 aa	Known RBP	5.61	□□□□□ -1.51
PPP4R1-209	ENST00000578329	LRRFIP2	Q9Y608	721 aa	Known RBP	5.61	□□□□□ -1.51
PPP4R1-209	ENST00000578329	RPAP1	Q9BWH6	1393 aa	Predicted RBP	5.6	□□□□□ -1.51
PPP4R1-209	ENST00000578329	GAK	O14976	1311 aa		5.6	□□□□□ -1.51
PPP4R1-209	ENST00000578329	PNMA6E	A0A0J9YXQ4	647 aa		5.6	□□□□□ -1.51
PPP4R1-209	ENST00000578329	BTBD19	C9JJ37	291 aa		5.6	□□□□□ -1.51
PPP4R1-209	ENST00000578329	WDHD1	O75717	1129 aa	Predicted RBP	5.6	□□□□□ -1.51
PPP4R1-209	ENST00000578329	CIAO1	O76071	339 aa		5.6	□□□□□ -1.51
PPP4R1-209	ENST00000578329	RLBP1	P12271	317 aa		5.6	□□□□□ -1.51
PPP4R1-209	ENST00000578329	TRIM27	P14373	513 aa		5.6	□□□□□ -1.51
PPP4R1-209	ENST00000578329	RHBDL3	P58872	404 aa		5.6	□□□□□ -1.51

Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms