RNA–Protein interactions for RNA: ENST00000578208.1

GGA3-204, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 3

Gene GGA3, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-204ENST00000578208 ECM29Q5VYK3 1845 aa14.32□□□□□ -0.12
GGA3-204ENST00000578208 FKBP1BP68106 108 aa14.32□□□□□ -0.12
GGA3-204ENST00000578208 CYP4F22Q6NT55 531 aa14.32□□□□□ -0.12
GGA3-204ENST00000578208 AIDAQ96BJ3 306 aa14.32□□□□□ -0.12
GGA3-204ENST00000578208 TMOD2Q9NZR1 351 aa14.32□□□□□ -0.12
GGA3-204ENST00000578208 SCAF8Q9UPN6 1271 aaKnown RBP14.32□□□□□ -0.12
GGA3-204ENST00000578208 PPP2R3BQ9Y5P8 575 aa14.32□□□□□ -0.12
GGA3-204ENST00000578208 POLR2AP24928 1970 aaKnown RBP14.31□□□□□ -0.12
GGA3-204ENST00000578208 LDHBP07195 334 aaKnown RBP14.31□□□□□ -0.12
GGA3-204ENST00000578208 HSPA1AP0DMV8 641 aaKnown RBP14.31□□□□□ -0.12
GGA3-204ENST00000578208 HSPA1BP0DMV9 641 aaKnown RBP14.31□□□□□ -0.12
GGA3-204ENST00000578208 HSP90AB4PQ58FF6 505 aa14.31□□□□□ -0.12
GGA3-204ENST00000578208 ERC1Q8IUD2 1116 aa14.31□□□□□ -0.12
GGA3-204ENST00000578208 RPAP2Q8IXW5 612 aaPredicted RBP14.31□□□□□ -0.12
GGA3-204ENST00000578208 PRMT6Q96LA8 375 aaPredicted RBP14.31□□□□□ -0.12
GGA3-204ENST00000578208 GPR108Q9NPR9 543 aa14.31□□□□□ -0.12
GGA3-204ENST00000578208 PCDHAC2Q9Y5I4 1007 aa14.31□□□□□ -0.12
GGA3-204ENST00000578208 PAPPA2Q9BXP8 1791 aa14.31□□□□□ -0.12
GGA3-204ENST00000578208 TNNI2P48788 182 aa14.3□□□□□ -0.12
GGA3-204ENST00000578208 GRIK5Q16478 980 aa14.3□□□□□ -0.12
GGA3-204ENST00000578208 SPDYE2Q495Y8 402 aa14.3□□□□□ -0.12
GGA3-204ENST00000578208 DEFB129Q9H1M3 183 aa14.3□□□□□ -0.12
GGA3-204ENST00000578208 ZNF70Q9UC06 446 aaPredicted RBP14.3□□□□□ -0.12
GGA3-204ENST00000578208 NOP58Q9Y2X3 529 aaKnown RBP14.3□□□□□ -0.12
GGA3-204ENST00000578208 PDS5AQ29RF7 1337 aaKnown RBP14.3□□□□□ -0.12
GGA3-204ENST00000578208 SALL1Q9NSC2 1324 aa14.3□□□□□ -0.12
GGA3-204ENST00000578208 ZBTB22O15209 634 aa14.29□□□□□ -0.12
GGA3-204ENST00000578208 UQCRFS1P1P0C7P4 283 aa14.29□□□□□ -0.12
GGA3-204ENST00000578208 MAP2K1Q02750 393 aaPredicted RBP14.29□□□□□ -0.12
GGA3-204ENST00000578208 RASGRF1Q13972 1273 aa14.29□□□□□ -0.12
GGA3-204ENST00000578208 TNNI3KQ59H18 835 aa14.29□□□□□ -0.12
GGA3-204ENST00000578208 CCDC158Q5M9N0 1113 aa14.29□□□□□ -0.12
GGA3-204ENST00000578208 TTC39AQ5SRH9 613 aa14.29□□□□□ -0.12
GGA3-204ENST00000578208 PRAMEF18Q5VWM3 479 aa14.29□□□□□ -0.12
GGA3-204ENST00000578208 SPTY2D1Q68D10 685 aaPredicted RBP14.29□□□□□ -0.12
GGA3-204ENST00000578208 RGMBQ6NW40 437 aa14.29□□□□□ -0.12
GGA3-204ENST00000578208 HHIPL2Q6UWX4 724 aa14.29□□□□□ -0.12
GGA3-204ENST00000578208 ARMC9Q7Z3E5 817 aa14.29□□□□□ -0.12
GGA3-204ENST00000578208 BEGAINQ9BUH8 593 aa14.29□□□□□ -0.12
GGA3-204ENST00000578208 MRIQ9BWK5 157 aa14.29□□□□□ -0.12
GGA3-204ENST00000578208 TDRD3Q9H7E2 651 aaKnown RBP14.29□□□□□ -0.12
GGA3-204ENST00000578208 ZBTB40Q9NUA8 1239 aa14.29□□□□□ -0.12
GGA3-204ENST00000578208 FPGT-TNNI3KV9GXZ4 949 aa14.29□□□□□ -0.12
GGA3-204ENST00000578208 PRDX5P30044 214 aa14.28□□□□□ -0.12
GGA3-204ENST00000578208 MAP2K2P36507 400 aa14.28□□□□□ -0.12
GGA3-204ENST00000578208 ZNF157P51786 506 aaPredicted RBP14.28□□□□□ -0.12
GGA3-204ENST00000578208 NOGQ13253 232 aa14.28□□□□□ -0.12
GGA3-204ENST00000578208 SUPT20HL1Q3ZLR7 823 aa14.28□□□□□ -0.12
GGA3-204ENST00000578208 C20orf194Q5TEA3 1177 aa14.28□□□□□ -0.12
GGA3-204ENST00000578208 DZIP1Q86YF9 867 aaKnown RBP14.28□□□□□ -0.12
GGA3-204ENST00000578208 SLF2Q8IX21 1173 aa14.28□□□□□ -0.12
GGA3-204ENST00000578208 CCDC102AQ96A19 550 aa14.28□□□□□ -0.12
GGA3-204ENST00000578208 ZDHHC15Q96MV8 337 aa14.28□□□□□ -0.12
GGA3-204ENST00000578208 THSD7BQ9C0I4 1608 aa14.28□□□□□ -0.12
GGA3-204ENST00000578208 ABCF2Q9UG63 623 aa14.28□□□□□ -0.12
GGA3-204ENST00000578208 EXOC6BQ9Y2D4 811 aa14.28□□□□□ -0.12
GGA3-204ENST00000578208 TCP10L2B9ZVM9 353 aa14.27□□□□□ -0.13
GGA3-204ENST00000578208 PPP1R12BO60237 982 aaPredicted RBP14.27□□□□□ -0.13
GGA3-204ENST00000578208 AOC2O75106 756 aa14.27□□□□□ -0.13
GGA3-204ENST00000578208 ARID4AP29374 1257 aaPredicted RBP14.27□□□□□ -0.13
GGA3-204ENST00000578208 RASA3Q14644 834 aa14.27□□□□□ -0.13
GGA3-204ENST00000578208 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.27□□□□□ -0.13
GGA3-204ENST00000578208 AOX1Q06278 1338 aa14.26□□□□□ -0.13
GGA3-204ENST00000578208 RRP1P56182 461 aaKnown RBP14.26□□□□□ -0.13
GGA3-204ENST00000578208 PRKG1Q13976 671 aa14.26□□□□□ -0.13
GGA3-204ENST00000578208 ERICH6Q7L0X2 663 aa14.26□□□□□ -0.13
GGA3-204ENST00000578208 SPATA5Q8NB90 893 aa14.26□□□□□ -0.13
GGA3-204ENST00000578208 DBNDD2Q9BQY9 259 aa14.26□□□□□ -0.13
GGA3-204ENST00000578208 UBE2Q2LH0YL09 131 aa14.25□□□□□ -0.13
GGA3-204ENST00000578208 DIXDC1Q155Q3 683 aa14.25□□□□□ -0.13
GGA3-204ENST00000578208 KIF1BPQ96EK5 621 aa14.25□□□□□ -0.13
GGA3-204ENST00000578208 HMG20BQ9P0W2 317 aa14.25□□□□□ -0.13
GGA3-204ENST00000578208 ANGEL1Q9UNK9 670 aaKnown RBP14.25□□□□□ -0.13
GGA3-204ENST00000578208 DAGLAQ9Y4D2 1042 aa14.25□□□□□ -0.13
GGA3-204ENST00000578208 APBB1O00213 710 aa14.24□□□□□ -0.13
GGA3-204ENST00000578208 RAB11FIP3O75154 756 aa14.24□□□□□ -0.13
GGA3-204ENST00000578208 SLC10A3P09131 477 aa14.24□□□□□ -0.13
GGA3-204ENST00000578208 IREB2P48200 963 aaKnown RBP14.24□□□□□ -0.13
GGA3-204ENST00000578208 GSTO1P78417 241 aa14.24□□□□□ -0.13
GGA3-204ENST00000578208 APOBEC3HQ6NTF7 200 aaKnown RBP14.24□□□□□ -0.13
GGA3-204ENST00000578208 MOB2Q70IA6 237 aa14.24□□□□□ -0.13
GGA3-204ENST00000578208 AACSQ86V21 672 aa14.24□□□□□ -0.13
GGA3-204ENST00000578208 CCDC8Q9H0W5 538 aaPredicted RBP14.24□□□□□ -0.13
GGA3-204ENST00000578208 WBP1LQ9NX94 342 aa14.24□□□□□ -0.13
GGA3-204ENST00000578208 LDHCP07864 332 aa14.23□□□□□ -0.13
GGA3-204ENST00000578208 MCAMP43121 646 aa14.23□□□□□ -0.13
GGA3-204ENST00000578208 CTCFP49711 727 aaPredicted RBP14.23□□□□□ -0.13
GGA3-204ENST00000578208 CACNB3P54284 484 aa14.23□□□□□ -0.13
GGA3-204ENST00000578208 NBPF12Q5TAG4 269 aaPredicted RBP14.23□□□□□ -0.13
GGA3-204ENST00000578208 FKBP1CQ5VVH2 108 aa14.23□□□□□ -0.13
GGA3-204ENST00000578208 FAM83AQ86UY5 434 aa14.23□□□□□ -0.13
GGA3-204ENST00000578208 RASAL3Q86YV0 1011 aa14.23□□□□□ -0.13
GGA3-204ENST00000578208 CLASRPQ8N2M8 674 aaKnown RBP14.23□□□□□ -0.13
GGA3-204ENST00000578208 RHPN1Q8TCX5 695 aa14.23□□□□□ -0.13
GGA3-204ENST00000578208 HOOK2Q96ED9 719 aa14.23□□□□□ -0.13
GGA3-204ENST00000578208 RAI14Q9P0K7 980 aa14.23□□□□□ -0.13
GGA3-204ENST00000578208 LRP2BPQ9P2M1 347 aa14.23□□□□□ -0.13
GGA3-204ENST00000578208 DBNLQ9UJU6 430 aaKnown RBP14.23□□□□□ -0.13
GGA3-204ENST00000578208 SSC5DA1L4H1 1573 aa14.22□□□□□ -0.13
GGA3-204ENST00000578208 FOXN1O15353 648 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms