RNA–Protein interactions for RNA: ENST00000578010.1

PPP4R1-207, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-207ENST00000578010 LTBP1Q14766 1721 aa8.23□□□□□ -1.09
PPP4R1-207ENST00000578010 DUOX1Q9NRD9 1551 aa8.22□□□□□ -1.09
PPP4R1-207ENST00000578010 SNED1Q8TER0 1413 aa8.22□□□□□ -1.09
PPP4R1-207ENST00000578010 PSMD14O00487 310 aa8.22□□□□□ -1.09
PPP4R1-207ENST00000578010 SMARCA5O60264 1052 aaPredicted RBP8.22□□□□□ -1.09
PPP4R1-207ENST00000578010 IGHDP01880 384 aa8.22□□□□□ -1.09
PPP4R1-207ENST00000578010 TNNI3KQ59H18 835 aa8.22□□□□□ -1.09
PPP4R1-207ENST00000578010 CCDC158Q5M9N0 1113 aa8.22□□□□□ -1.09
PPP4R1-207ENST00000578010 RBM26Q5T8P6 1007 aaKnown RBP8.22□□□□□ -1.09
PPP4R1-207ENST00000578010 B4GALNT3Q6L9W6 998 aa8.22□□□□□ -1.09
PPP4R1-207ENST00000578010 AACSQ86V21 672 aa8.22□□□□□ -1.09
PPP4R1-207ENST00000578010 MXD3Q9BW11 206 aa8.22□□□□□ -1.09
PPP4R1-207ENST00000578010 LRRCC1Q9C099 1032 aa8.22□□□□□ -1.09
PPP4R1-207ENST00000578010 GPHNQ9NQX3 736 aaPredicted RBP8.22□□□□□ -1.09
PPP4R1-207ENST00000578010 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.22□□□□□ -1.09
PPP4R1-207ENST00000578010 FPGT-TNNI3KV9GXZ4 949 aa8.22□□□□□ -1.09
PPP4R1-207ENST00000578010 WDR90Q96KV7 1748 aa8.22□□□□□ -1.09
PPP4R1-207ENST00000578010 ZNF541Q9H0D2 1346 aa8.22□□□□□ -1.09
PPP4R1-207ENST00000578010 POTEMA6NI47 508 aa8.21□□□□□ -1.1
PPP4R1-207ENST00000578010 H7C1D1 291 aa8.21□□□□□ -1.1
PPP4R1-207ENST00000578010 VIL1P09327 827 aaKnown RBP8.21□□□□□ -1.1
PPP4R1-207ENST00000578010 IL1R1P14778 569 aa8.21□□□□□ -1.1
PPP4R1-207ENST00000578010 VEGFAP15692 232 aaPredicted RBP8.21□□□□□ -1.1
PPP4R1-207ENST00000578010 LMOD1P29536 600 aaPredicted RBP8.21□□□□□ -1.1
PPP4R1-207ENST00000578010 PHKA1P46020 1223 aa8.21□□□□□ -1.1
PPP4R1-207ENST00000578010 HDAC1Q13547 482 aaPredicted RBP8.21□□□□□ -1.1
PPP4R1-207ENST00000578010 TTC39AQ5SRH9 613 aa8.21□□□□□ -1.1
PPP4R1-207ENST00000578010 STRIP1Q5VSL9 837 aa8.21□□□□□ -1.1
PPP4R1-207ENST00000578010 CCDC102BQ68D86 513 aa8.21□□□□□ -1.1
PPP4R1-207ENST00000578010 GPC2Q8N158 579 aa8.21□□□□□ -1.1
PPP4R1-207ENST00000578010 SPRYD3Q8NCJ5 442 aa8.21□□□□□ -1.1
PPP4R1-207ENST00000578010 TDRD7Q8NHU6 1098 aaKnown RBP8.21□□□□□ -1.1
PPP4R1-207ENST00000578010 EAF2Q96CJ1 260 aaPredicted RBP8.21□□□□□ -1.1
PPP4R1-207ENST00000578010 DBNDD2Q9BQY9 259 aa8.21□□□□□ -1.1
PPP4R1-207ENST00000578010 GPR108Q9NPR9 543 aa8.21□□□□□ -1.1
PPP4R1-207ENST00000578010 PCDH10Q9P2E7 1040 aa8.21□□□□□ -1.1
PPP4R1-207ENST00000578010 SCN4AP35499 1836 aa8.21□□□□□ -1.1
PPP4R1-207ENST00000578010 MED23Q9ULK4 1368 aa8.21□□□□□ -1.1
PPP4R1-207ENST00000578010 COL4A5P29400 1685 aa8.21□□□□□ -1.1
PPP4R1-207ENST00000578010 F8W031 263 aaPredicted RBP8.2□□□□□ -1.1
PPP4R1-207ENST00000578010 SLC34A2O95436 690 aa8.2□□□□□ -1.1
PPP4R1-207ENST00000578010 GMPSP49915 693 aaPredicted RBP8.2□□□□□ -1.1
PPP4R1-207ENST00000578010 FOXK1P85037 733 aa8.2□□□□□ -1.1
PPP4R1-207ENST00000578010 RSBN1LQ6PCB5 846 aaPredicted RBP8.2□□□□□ -1.1
PPP4R1-207ENST00000578010 POTEGQ6S5H5 508 aa8.2□□□□□ -1.1
PPP4R1-207ENST00000578010 ZNF710Q8N1W2 664 aa8.2□□□□□ -1.1
PPP4R1-207ENST00000578010 GCC1Q96CN9 775 aa8.2□□□□□ -1.1
PPP4R1-207ENST00000578010 CNOT7Q9UIV1 285 aaKnown RBP8.2□□□□□ -1.1
PPP4R1-207ENST00000578010 DENND2AQ9ULE3 1009 aa8.2□□□□□ -1.1
PPP4R1-207ENST00000578010 GOLGB1Q14789 3259 aaKnown RBP8.2□□□□□ -1.1
PPP4R1-207ENST00000578010 IQCA1LA6NCM1 817 aa8.19□□□□□ -1.1
PPP4R1-207ENST00000578010 UQCRFS1P1P0C7P4 283 aa8.19□□□□□ -1.1
PPP4R1-207ENST00000578010 EPS15P42566 896 aa8.19□□□□□ -1.1
PPP4R1-207ENST00000578010 RBM5P52756 815 aaKnown RBP eCLIP8.19□□□□□ -1.1
PPP4R1-207ENST00000578010 EAPPQ56P03 285 aaPredicted RBP8.19□□□□□ -1.1
PPP4R1-207ENST00000578010 DACT2Q5SW24 774 aa8.19□□□□□ -1.1
PPP4R1-207ENST00000578010 KIAA0825Q8IV33 1275 aa8.19□□□□□ -1.1
PPP4R1-207ENST00000578010 OGFOD1Q8N543 542 aa8.19□□□□□ -1.1
PPP4R1-207ENST00000578010 WDR66Q8TBY9 1149 aa8.19□□□□□ -1.1
PPP4R1-207ENST00000578010 CRISPLD2Q9H0B8 497 aa8.19□□□□□ -1.1
PPP4R1-207ENST00000578010 SNRKQ9NRH2 765 aa8.19□□□□□ -1.1
PPP4R1-207ENST00000578010 HACL1Q9UJ83 578 aa8.19□□□□□ -1.1
PPP4R1-207ENST00000578010 HDAC9Q9UKV0 1011 aa8.19□□□□□ -1.1
PPP4R1-207ENST00000578010 PSME4Q14997 1843 aa8.18□□□□□ -1.1
PPP4R1-207ENST00000578010 USP17L8P0C7I0 530 aa8.18□□□□□ -1.1
PPP4R1-207ENST00000578010 HOXB1P14653 301 aaPredicted RBP8.18□□□□□ -1.1
PPP4R1-207ENST00000578010 RPS12P25398 132 aaKnown RBP8.18□□□□□ -1.1
PPP4R1-207ENST00000578010 PDE4AP27815 886 aa8.18□□□□□ -1.1
PPP4R1-207ENST00000578010 EPHX2P34913 555 aa8.18□□□□□ -1.1
PPP4R1-207ENST00000578010 MFSD14BQ5SR56 506 aa8.18□□□□□ -1.1
PPP4R1-207ENST00000578010 AGBL3Q8NEM8 1001 aa8.18□□□□□ -1.1
PPP4R1-207ENST00000578010 TBC1D22AQ8WUA7 517 aa8.18□□□□□ -1.1
PPP4R1-207ENST00000578010 DPF2Q92785 391 aa8.18□□□□□ -1.1
PPP4R1-207ENST00000578010 CCDC136Q96JN2 1154 aa8.18□□□□□ -1.1
PPP4R1-207ENST00000578010 BOLA2Q9H3K6 86 aa8.18□□□□□ -1.1
PPP4R1-207ENST00000578010 TLR7Q9NYK1 1049 aaKnown RBP8.18□□□□□ -1.1
PPP4R1-207ENST00000578010 GPRC5DQ9NZD1 345 aa8.18□□□□□ -1.1
PPP4R1-207ENST00000578010 ABCF2Q9UG63 623 aa8.18□□□□□ -1.1
PPP4R1-207ENST00000578010 DBNLQ9UJU6 430 aaKnown RBP8.18□□□□□ -1.1
PPP4R1-207ENST00000578010 IRS2Q9Y4H2 1338 aa8.18□□□□□ -1.1
PPP4R1-207ENST00000578010 MYH13Q9UKX3 1938 aa8.17□□□□□ -1.1
PPP4R1-207ENST00000578010 SHTN1A0MZ66 631 aa8.17□□□□□ -1.1
PPP4R1-207ENST00000578010 POTECB2RU33 542 aa8.17□□□□□ -1.1
PPP4R1-207ENST00000578010 SEMA3EO15041 775 aa8.17□□□□□ -1.1
PPP4R1-207ENST00000578010 TOMM70O94826 608 aa8.17□□□□□ -1.1
PPP4R1-207ENST00000578010 SCNN1DP51172 638 aa8.17□□□□□ -1.1
PPP4R1-207ENST00000578010 C1QTNF8P60827 252 aa8.17□□□□□ -1.1
PPP4R1-207ENST00000578010 TBC1D10BQ4KMP7 808 aaPredicted RBP8.17□□□□□ -1.1
PPP4R1-207ENST00000578010 TBC1D9Q6ZT07 1266 aa8.17□□□□□ -1.1
PPP4R1-207ENST00000578010 SAMD7Q7Z3H4 446 aa8.17□□□□□ -1.1
PPP4R1-207ENST00000578010 SPATA5Q8NB90 893 aa8.17□□□□□ -1.1
PPP4R1-207ENST00000578010 GPATCH3Q96I76 525 aa8.17□□□□□ -1.1
PPP4R1-207ENST00000578010 LNPKQ9C0E8 428 aa8.17□□□□□ -1.1
PPP4R1-207ENST00000578010 TAF1DQ9H5J8 278 aaPredicted RBP8.17□□□□□ -1.1
PPP4R1-207ENST00000578010 ADARB2Q9NS39 739 aaKnown RBP8.17□□□□□ -1.1
PPP4R1-207ENST00000578010 HMG20BQ9P0W2 317 aa8.17□□□□□ -1.1
PPP4R1-207ENST00000578010 LRP2BPQ9P2M1 347 aa8.17□□□□□ -1.1
PPP4R1-207ENST00000578010 TTF2Q9UNY4 1162 aaKnown RBP8.17□□□□□ -1.1
PPP4R1-207ENST00000578010 FAM205AQ6ZU69 1335 aa8.17□□□□□ -1.1
PPP4R1-207ENST00000578010 LDHBP07195 334 aaKnown RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms