RNA–Protein interactions for RNA: ENST00000577169.1

NCBP3-207, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-207ENST00000577169 ARID4AP29374 1257 aaPredicted RBP19.28■□□□□ 0.68
NCBP3-207ENST00000577169 HDLBPQ00341 1268 aaKnown RBP19.28■□□□□ 0.68
NCBP3-207ENST00000577169 TTC39AQ5SRH9 613 aa19.28■□□□□ 0.68
NCBP3-207ENST00000577169 ZNF408Q9H9D4 720 aa19.28■□□□□ 0.68
NCBP3-207ENST00000577169 TLR7Q9NYK1 1049 aaKnown RBP19.28■□□□□ 0.68
NCBP3-207ENST00000577169 DBNLQ9UJU6 430 aaKnown RBP19.28■□□□□ 0.68
NCBP3-207ENST00000577169 SALL1Q9NSC2 1324 aa19.27■□□□□ 0.68
NCBP3-207ENST00000577169 TRPM7Q96QT4 1865 aa19.27■□□□□ 0.68
NCBP3-207ENST00000577169 CELF2O95319 508 aaKnown RBP19.27■□□□□ 0.68
NCBP3-207ENST00000577169 LDHBP07195 334 aaKnown RBP19.27■□□□□ 0.68
NCBP3-207ENST00000577169 PRDX5P30044 214 aa19.27■□□□□ 0.68
NCBP3-207ENST00000577169 AACSQ86V21 672 aa19.27■□□□□ 0.68
NCBP3-207ENST00000577169 SPATA5Q8NB90 893 aa19.27■□□□□ 0.68
NCBP3-207ENST00000577169 BCL11AQ9H165 835 aa19.27■□□□□ 0.68
NCBP3-207ENST00000577169 AOX1Q06278 1338 aa19.26■□□□□ 0.67
NCBP3-207ENST00000577169 PDS5AQ29RF7 1337 aaKnown RBP19.26■□□□□ 0.67
NCBP3-207ENST00000577169 CLRN2A0PK11 232 aa19.26■□□□□ 0.67
NCBP3-207ENST00000577169 MYO1BO43795 1136 aa19.26■□□□□ 0.67
NCBP3-207ENST00000577169 MCAMP43121 646 aa19.26■□□□□ 0.67
NCBP3-207ENST00000577169 PI16Q6UXB8 463 aa19.26■□□□□ 0.67
NCBP3-207ENST00000577169 CLASRPQ8N2M8 674 aaKnown RBP19.26■□□□□ 0.67
NCBP3-207ENST00000577169 TEKT1Q969V4 418 aa19.26■□□□□ 0.67
NCBP3-207ENST00000577169 DCTPP1Q9H773 170 aa19.26■□□□□ 0.67
NCBP3-207ENST00000577169 TDRD3Q9H7E2 651 aaKnown RBP19.26■□□□□ 0.67
NCBP3-207ENST00000577169 SNRKQ9NRH2 765 aa19.26■□□□□ 0.67
NCBP3-207ENST00000577169 ABCF2Q9UG63 623 aa19.26■□□□□ 0.67
NCBP3-207ENST00000577169 MAST3O60307 1309 aa19.25■□□□□ 0.67
NCBP3-207ENST00000577169 PRAMEF18Q5VWM3 479 aa19.25■□□□□ 0.67
NCBP3-207ENST00000577169 HHIPL2Q6UWX4 724 aa19.25■□□□□ 0.67
NCBP3-207ENST00000577169 TBC1D9Q6ZT07 1266 aa19.25■□□□□ 0.67
NCBP3-207ENST00000577169 ZGPATQ8N5A5 531 aaKnown RBP19.25■□□□□ 0.67
NCBP3-207ENST00000577169 EXOC6Q8TAG9 804 aa19.25■□□□□ 0.67
NCBP3-207ENST00000577169 CDCA5Q96FF9 252 aa19.25■□□□□ 0.67
NCBP3-207ENST00000577169 ZNF512BQ96KM6 892 aaPredicted RBP19.25■□□□□ 0.67
NCBP3-207ENST00000577169 ZNF70Q9UC06 446 aaPredicted RBP19.25■□□□□ 0.67
NCBP3-207ENST00000577169 SPTY2D1Q68D10 685 aaPredicted RBP19.24■□□□□ 0.67
NCBP3-207ENST00000577169 APOBEC3FQ8IUX4 373 aaKnown RBP19.24■□□□□ 0.67
NCBP3-207ENST00000577169 ZDHHC15Q96MV8 337 aa19.24■□□□□ 0.67
NCBP3-207ENST00000577169 ABT1Q9ULW3 272 aaKnown RBP19.24■□□□□ 0.67
NCBP3-207ENST00000577169 SMARCA5O60264 1052 aaPredicted RBP19.23■□□□□ 0.67
NCBP3-207ENST00000577169 IFIT2P09913 472 aaKnown RBP19.23■□□□□ 0.67
NCBP3-207ENST00000577169 DIXDC1Q155Q3 683 aa19.23■□□□□ 0.67
NCBP3-207ENST00000577169 ERICH6Q7L0X2 663 aa19.23■□□□□ 0.67
NCBP3-207ENST00000577169 LRRCC1Q9C099 1032 aa19.23■□□□□ 0.67
NCBP3-207ENST00000577169 VEZTQ9HBM0 779 aa19.23■□□□□ 0.67
NCBP3-207ENST00000577169 MKRN1Q9UHC7 482 aaKnown RBP19.23■□□□□ 0.67
NCBP3-207ENST00000577169 DEFB115Q30KQ5 88 aa19.22■□□□□ 0.67
NCBP3-207ENST00000577169 SPDYE2Q495Y8 402 aa19.22■□□□□ 0.67
NCBP3-207ENST00000577169 APOBEC3HQ6NTF7 200 aaKnown RBP19.22■□□□□ 0.67
NCBP3-207ENST00000577169 KLRG1Q96E93 195 aa19.22■□□□□ 0.67
NCBP3-207ENST00000577169 DEFB129Q9H1M3 183 aa19.22■□□□□ 0.67
NCBP3-207ENST00000577169 ZAP70P43403 619 aa19.21■□□□□ 0.67
NCBP3-207ENST00000577169 AAMPQ13685 434 aa19.21■□□□□ 0.67
NCBP3-207ENST00000577169 C2orf69Q8N8R5 385 aa19.21■□□□□ 0.67
NCBP3-207ENST00000577169 GBA2Q9HCG7 927 aaPredicted RBP19.21■□□□□ 0.67
NCBP3-207ENST00000577169 DAGLAQ9Y4D2 1042 aa19.21■□□□□ 0.67
NCBP3-207ENST00000577169 TLL2Q9Y6L7 1015 aa19.21■□□□□ 0.67
NCBP3-207ENST00000577169 ECM29Q5VYK3 1845 aa19.21■□□□□ 0.67
NCBP3-207ENST00000577169 AKAP11Q9UKA4 1901 aa19.2■□□□□ 0.66
NCBP3-207ENST00000577169 CYP2E1P05181 493 aaPredicted RBP19.2■□□□□ 0.66
NCBP3-207ENST00000577169 MECOMQ03112 1051 aa19.2■□□□□ 0.66
NCBP3-207ENST00000577169 DZIP1Q86YF9 867 aaKnown RBP19.2■□□□□ 0.66
NCBP3-207ENST00000577169 LRP2BPQ9P2M1 347 aa19.2■□□□□ 0.66
NCBP3-207ENST00000577169 RASSF10A6NK89 507 aa19.19■□□□□ 0.66
NCBP3-207ENST00000577169 TCP10L2B9ZVM9 353 aa19.19■□□□□ 0.66
NCBP3-207ENST00000577169 IRX6P78412 446 aaPredicted RBP19.19■□□□□ 0.66
NCBP3-207ENST00000577169 RASA3Q14644 834 aa19.19■□□□□ 0.66
NCBP3-207ENST00000577169 SAPCD2Q86UD0 394 aa19.19■□□□□ 0.66
NCBP3-207ENST00000577169 RAI14Q9P0K7 980 aa19.19■□□□□ 0.66
NCBP3-207ENST00000577169 CACNB3P54284 484 aa19.18■□□□□ 0.66
NCBP3-207ENST00000577169 SLF2Q8IX21 1173 aa19.18■□□□□ 0.66
NCBP3-207ENST00000577169 ZNF384Q8TF68 577 aa19.18■□□□□ 0.66
NCBP3-207ENST00000577169 FAM163AQ96GL9 167 aaPredicted RBP19.18■□□□□ 0.66
NCBP3-207ENST00000577169 NDUFB9Q9Y6M9 179 aa19.18■□□□□ 0.66
NCBP3-207ENST00000577169 CNTNAP1P78357 1384 aa19.18■□□□□ 0.66
NCBP3-207ENST00000577169 MYH2Q9UKX2 1941 aa19.17■□□□□ 0.66
NCBP3-207ENST00000577169 VEGFBP49765 207 aa19.17■□□□□ 0.66
NCBP3-207ENST00000577169 CDC42EP5Q6NZY7 148 aa19.17■□□□□ 0.66
NCBP3-207ENST00000577169 NSUN4Q96CB9 384 aaKnown RBP19.17■□□□□ 0.66
NCBP3-207ENST00000577169 PIH1D3Q9NQM4 214 aaKnown RBP19.17■□□□□ 0.66
NCBP3-207ENST00000577169 USP40Q9NVE5 1235 aa19.17■□□□□ 0.66
NCBP3-207ENST00000577169 PPP2R3BQ9Y5P8 575 aa19.17■□□□□ 0.66
NCBP3-207ENST00000577169 LDHCP07864 332 aa19.16■□□□□ 0.66
NCBP3-207ENST00000577169 NF2P35240 595 aa19.16■□□□□ 0.66
NCBP3-207ENST00000577169 TNNI2P48788 182 aa19.16■□□□□ 0.66
NCBP3-207ENST00000577169 HUNKP57058 714 aa19.16■□□□□ 0.66
NCBP3-207ENST00000577169 GSTO1P78417 241 aa19.16■□□□□ 0.66
NCBP3-207ENST00000577169 HDAC1Q13547 482 aaPredicted RBP19.16■□□□□ 0.66
NCBP3-207ENST00000577169 TNFAIP1Q13829 316 aa19.16■□□□□ 0.66
NCBP3-207ENST00000577169 NBPF12Q5TAG4 269 aaPredicted RBP19.16■□□□□ 0.66
NCBP3-207ENST00000577169 MOB2Q70IA6 237 aa19.16■□□□□ 0.66
NCBP3-207ENST00000577169 ANTXR1Q9H6X2 564 aa19.16■□□□□ 0.66
NCBP3-207ENST00000577169 TMOD2Q9NZR1 351 aa19.16■□□□□ 0.66
NCBP3-207ENST00000577169 GAKO14976 1311 aa19.16■□□□□ 0.66
NCBP3-207ENST00000577169 PRKG1Q13976 671 aa19.15■□□□□ 0.66
NCBP3-207ENST00000577169 CYP4F22Q6NT55 531 aa19.15■□□□□ 0.66
NCBP3-207ENST00000577169 PAXIP1Q6ZW49 1069 aaPredicted RBP19.15■□□□□ 0.66
NCBP3-207ENST00000577169 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.15■□□□□ 0.66
NCBP3-207ENST00000577169 MYO5AQ9Y4I1 1855 aaKnown RBP19.14■□□□□ 0.65
NCBP3-207ENST00000577169 GPR75-ASB3A0A0A6YYF3 556 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms