RNA–Protein interactions for RNA: ENST00000577085.1

SF3B3-215, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-215ENST00000577085 DZIP1LQ8IYY4 767 aaKnown RBP19.24■□□□□ 0.67
SF3B3-215ENST00000577085 TMEM57Q8N5G2 664 aa19.24■□□□□ 0.67
SF3B3-215ENST00000577085 WDR66Q8TBY9 1149 aa19.24■□□□□ 0.67
SF3B3-215ENST00000577085 ZIC5Q96T25 663 aa19.24■□□□□ 0.67
SF3B3-215ENST00000577085 ANGEL1Q9UNK9 670 aaKnown RBP19.24■□□□□ 0.67
SF3B3-215ENST00000577085 TNNQ9UQP3 1299 aa19.24■□□□□ 0.67
SF3B3-215ENST00000577085 TNNI2P48788 182 aa19.23■□□□□ 0.67
SF3B3-215ENST00000577085 RASAL3Q86YV0 1011 aa19.23■□□□□ 0.67
SF3B3-215ENST00000577085 TDRD3Q9H7E2 651 aaKnown RBP19.23■□□□□ 0.67
SF3B3-215ENST00000577085 AKAP2Q9Y2D5 859 aa19.23■□□□□ 0.67
SF3B3-215ENST00000577085 SUGT1Q9Y2Z0 365 aa19.23■□□□□ 0.67
SF3B3-215ENST00000577085 ARAP2Q8WZ64 1704 aa19.22■□□□□ 0.67
SF3B3-215ENST00000577085 HDLBPQ00341 1268 aaKnown RBP19.22■□□□□ 0.67
SF3B3-215ENST00000577085 MTX1Q13505 466 aa19.22■□□□□ 0.67
SF3B3-215ENST00000577085 RASA3Q14644 834 aa19.22■□□□□ 0.67
SF3B3-215ENST00000577085 ITPRIPQ8IWB1 547 aa19.22■□□□□ 0.67
SF3B3-215ENST00000577085 TMOD2Q9NZR1 351 aa19.22■□□□□ 0.67
SF3B3-215ENST00000577085 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.22■□□□□ 0.67
SF3B3-215ENST00000577085 ZNF70Q9UC06 446 aaPredicted RBP19.22■□□□□ 0.67
SF3B3-215ENST00000577085 ECM29Q5VYK3 1845 aa19.21■□□□□ 0.67
SF3B3-215ENST00000577085 SPDYE2Q495Y8 402 aa19.21■□□□□ 0.67
SF3B3-215ENST00000577085 TCP10L2B9ZVM9 353 aa19.2■□□□□ 0.66
SF3B3-215ENST00000577085 G3BP1Q13283 466 aaKnown RBP eCLIP19.2■□□□□ 0.665e-9■□□□□ 9.9
SF3B3-215ENST00000577085 GRIK5Q16478 980 aa19.2■□□□□ 0.66
SF3B3-215ENST00000577085 SAGE1Q9NXZ1 904 aa19.2■□□□□ 0.66
SF3B3-215ENST00000577085 DENND2AQ9ULE3 1009 aa19.2■□□□□ 0.66
SF3B3-215ENST00000577085 SEMA3EO15041 775 aa19.19■□□□□ 0.66
SF3B3-215ENST00000577085 IREB2P48200 963 aaKnown RBP19.19■□□□□ 0.66
SF3B3-215ENST00000577085 TFCP2Q12800 502 aa19.19■□□□□ 0.66
SF3B3-215ENST00000577085 MKRN3Q13064 507 aaKnown RBP19.19■□□□□ 0.66
SF3B3-215ENST00000577085 GORABQ5T7V8 394 aa19.19■□□□□ 0.66
SF3B3-215ENST00000577085 NEUROD6Q96NK8 337 aa19.19■□□□□ 0.66
SF3B3-215ENST00000577085 CSRNP1Q96S65 589 aa19.19■□□□□ 0.66
SF3B3-215ENST00000577085 AOX1Q06278 1338 aa19.19■□□□□ 0.66
SF3B3-215ENST00000577085 TRPA1O75762 1119 aa19.18■□□□□ 0.66
SF3B3-215ENST00000577085 TIMM10P62072 90 aa19.18■□□□□ 0.66
SF3B3-215ENST00000577085 OS9Q13438 667 aaPredicted RBP19.18■□□□□ 0.66
SF3B3-215ENST00000577085 MVPQ14764 893 aaKnown RBP19.18■□□□□ 0.66
SF3B3-215ENST00000577085 NBPF12Q5TAG4 269 aaPredicted RBP19.18■□□□□ 0.66
SF3B3-215ENST00000577085 SLC10A4Q96EP9 437 aa19.18■□□□□ 0.66
SF3B3-215ENST00000577085 ZDHHC15Q96MV8 337 aa19.18■□□□□ 0.66
SF3B3-215ENST00000577085 MRIQ9BWK5 157 aa19.18■□□□□ 0.66
SF3B3-215ENST00000577085 A0A1B0GUL7 405 aa19.17■□□□□ 0.66
SF3B3-215ENST00000577085 LDHBP07195 334 aaKnown RBP19.17■□□□□ 0.66
SF3B3-215ENST00000577085 ADORA1P30542 326 aa19.17■□□□□ 0.66
SF3B3-215ENST00000577085 PHKA1P46020 1223 aa19.17■□□□□ 0.66
SF3B3-215ENST00000577085 SREBF2Q12772 1141 aa19.17■□□□□ 0.66
SF3B3-215ENST00000577085 CCDC102BQ68D86 513 aa19.17■□□□□ 0.66
SF3B3-215ENST00000577085 ZGPATQ8N5A5 531 aaKnown RBP19.17■□□□□ 0.66
SF3B3-215ENST00000577085 RNF186Q9NXI6 227 aa19.17■□□□□ 0.66
SF3B3-215ENST00000577085 FZD1Q9UP38 647 aa19.17■□□□□ 0.66
SF3B3-215ENST00000577085 MYH13Q9UKX3 1938 aa19.16■□□□□ 0.66
SF3B3-215ENST00000577085 PNMA6EA0A0J9YXQ4 647 aa19.16■□□□□ 0.66
SF3B3-215ENST00000577085 MS4A1P11836 297 aa19.16■□□□□ 0.66
SF3B3-215ENST00000577085 LDLRAD1Q5T700 205 aa19.16■□□□□ 0.66
SF3B3-215ENST00000577085 HHIPL2Q6UWX4 724 aa19.16■□□□□ 0.66
SF3B3-215ENST00000577085 CACNB3P54284 484 aa19.15■□□□□ 0.66
SF3B3-215ENST00000577085 MAP3K11Q16584 847 aa19.15■□□□□ 0.66
SF3B3-215ENST00000577085 XAGE2Q96GT9 111 aa19.15■□□□□ 0.66
SF3B3-215ENST00000577085 TMEM39BQ9GZU3 492 aa19.15■□□□□ 0.66
SF3B3-215ENST00000577085 UNCXA6NJT0 531 aa19.14■□□□□ 0.65
SF3B3-215ENST00000577085 DZIP1Q86YF9 867 aaKnown RBP19.14■□□□□ 0.65
SF3B3-215ENST00000577085 ANKRD13AQ8IZ07 590 aa19.14■□□□□ 0.65
SF3B3-215ENST00000577085 HOOK2Q96ED9 719 aa19.14■□□□□ 0.65
SF3B3-215ENST00000577085 C1orf115Q9H7X2 142 aa19.14■□□□□ 0.65
SF3B3-215ENST00000577085 PRDX5P30044 214 aa19.13■□□□□ 0.65
SF3B3-215ENST00000577085 SPRYD7Q5W111 196 aa19.13■□□□□ 0.65
SF3B3-215ENST00000577085 APOBEC3HQ6NTF7 200 aaKnown RBP19.13■□□□□ 0.65
SF3B3-215ENST00000577085 ABCF2Q9UG63 623 aa19.13■□□□□ 0.65
SF3B3-215ENST00000577085 SALL1Q9NSC2 1324 aa19.13■□□□□ 0.65
SF3B3-215ENST00000577085 SSC5DA1L4H1 1573 aa19.13■□□□□ 0.65
SF3B3-215ENST00000577085 USP2O75604 605 aaPredicted RBP19.12■□□□□ 0.65
SF3B3-215ENST00000577085 SURF6O75683 361 aaKnown RBP19.12■□□□□ 0.65
SF3B3-215ENST00000577085 RLBP1P12271 317 aa19.12■□□□□ 0.65
SF3B3-215ENST00000577085 ATP8B2P98198 1209 aa19.12■□□□□ 0.65
SF3B3-215ENST00000577085 RASGRF1Q13972 1273 aa19.12■□□□□ 0.65
SF3B3-215ENST00000577085 DIXDC1Q155Q3 683 aa19.12■□□□□ 0.65
SF3B3-215ENST00000577085 SPTY2D1Q68D10 685 aaPredicted RBP19.12■□□□□ 0.65
SF3B3-215ENST00000577085 SLF2Q8IX21 1173 aa19.12■□□□□ 0.65
SF3B3-215ENST00000577085 CLMNQ96JQ2 1002 aa19.12■□□□□ 0.65
SF3B3-215ENST00000577085 AKAP11Q9UKA4 1901 aa19.12■□□□□ 0.65
SF3B3-215ENST00000577085 MANSC4A6NHS7 340 aaPredicted RBP19.11■□□□□ 0.65
SF3B3-215ENST00000577085 ZBTB7BO15156 539 aaPredicted RBP19.11■□□□□ 0.65
SF3B3-215ENST00000577085 ZBTB48P10074 688 aaPredicted RBP19.11■□□□□ 0.65
SF3B3-215ENST00000577085 TM4SF4P48230 202 aa19.11■□□□□ 0.65
SF3B3-215ENST00000577085 FKBP1CQ5VVH2 108 aa19.11■□□□□ 0.65
SF3B3-215ENST00000577085 FAM83AQ86UY5 434 aa19.11■□□□□ 0.65
SF3B3-215ENST00000577085 PANK1Q8TE04 598 aa19.11■□□□□ 0.65
SF3B3-215ENST00000577085 DAGLAQ9Y4D2 1042 aa19.11■□□□□ 0.65
SF3B3-215ENST00000577085 CSADQ9Y600 493 aa19.11■□□□□ 0.65
SF3B3-215ENST00000577085 PDS5AQ29RF7 1337 aaKnown RBP19.1■□□□□ 0.65
SF3B3-215ENST00000577085 INHBEP58166 350 aa19.1■□□□□ 0.65
SF3B3-215ENST00000577085 POLA2Q14181 598 aa19.1■□□□□ 0.65
SF3B3-215ENST00000577085 SSH3Q8TE77 659 aa19.1■□□□□ 0.65
SF3B3-215ENST00000577085 WNK4Q96J92 1243 aa19.1■□□□□ 0.65
SF3B3-215ENST00000577085 TEPSINQ96N21 525 aa19.1■□□□□ 0.65
SF3B3-215ENST00000577085 DGKZQ13574 1117 aa19.09■□□□□ 0.65
SF3B3-215ENST00000577085 DCAF15Q66K64 600 aa19.09■□□□□ 0.65
SF3B3-215ENST00000577085 CDAN1Q8IWY9 1227 aa19.09■□□□□ 0.65
SF3B3-215ENST00000577085 ABHD8Q96I13 439 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms