RNA–Protein interactions for RNA: ENST00000577001.1

PRPF8-216, Transcript of pre-mRNA processing factor 8, human

TSL 5

Gene PRPF8, Length 3,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRPF8-216	ENST00000577001	CYP2D7	A0A087X1C5	515 aa		17.2	■□□□□ 0.34
PRPF8-216	ENST00000577001	PFKFB1	P16118	471 aa		17.2	■□□□□ 0.34
PRPF8-216	ENST00000577001	RABL6	Q3YEC7	729 aa	Predicted RBP	17.2	■□□□□ 0.34
PRPF8-216	ENST00000577001	EEF2KMT	Q96G04	330 aa		17.2	■□□□□ 0.34
PRPF8-216	ENST00000577001	ELP1	O95163	1332 aa		17.2	■□□□□ 0.34
PRPF8-216	ENST00000577001	SMARCC2	Q8TAQ2	1214 aa		17.2	■□□□□ 0.34
PRPF8-216	ENST00000577001	TMOD3	Q9NYL9	352 aa		17.2	■□□□□ 0.34
PRPF8-216	ENST00000577001	ERCC6L	Q2NKX8	1250 aa		17.19	■□□□□ 0.34
PRPF8-216	ENST00000577001	MYSM1	Q5VVJ2	828 aa		17.19	■□□□□ 0.34
PRPF8-216	ENST00000577001	ANO10	Q9NW15	660 aa		17.19	■□□□□ 0.34
PRPF8-216	ENST00000577001	MROH7-TTC4	A0A0A0MT08	1334 aa		17.19	■□□□□ 0.34
PRPF8-216	ENST00000577001	ZNF532	Q9HCE3	1301 aa		17.19	■□□□□ 0.34
PRPF8-216	ENST00000577001	HEG1	Q9ULI3	1381 aa		17.19	■□□□□ 0.34
PRPF8-216	ENST00000577001	METAP2	P50579	478 aa	Known RBP eCLIP	17.19	■□□□□ 0.34	1e-6	■□□□□ 11
PRPF8-216	ENST00000577001	EVX2	Q03828	476 aa		17.19	■□□□□ 0.34
PRPF8-216	ENST00000577001	LINC00301	Q8NCQ3	95 aa		17.19	■□□□□ 0.34
PRPF8-216	ENST00000577001	ZFP91	Q96JP5	570 aa	Predicted RBP	17.19	■□□□□ 0.34
PRPF8-216	ENST00000577001	HPS5	Q9UPZ3	1129 aa		17.19	■□□□□ 0.34
PRPF8-216	ENST00000577001	FAM205C	A6NFA0	338 aa		17.18	■□□□□ 0.34
PRPF8-216	ENST00000577001	EPB41L2	O43491	1005 aa	Known RBP	17.18	■□□□□ 0.34
PRPF8-216	ENST00000577001	MAGEB6	Q8N7X4	407 aa		17.18	■□□□□ 0.34
PRPF8-216	ENST00000577001	NFAT5	O94916	1531 aa		17.18	■□□□□ 0.34
PRPF8-216	ENST00000577001	TERF1	P54274	439 aa		17.18	■□□□□ 0.34
PRPF8-216	ENST00000577001	NR5A1	Q13285	461 aa		17.18	■□□□□ 0.34
PRPF8-216	ENST00000577001	BTBD18	B2RXH4	712 aa		17.18	■□□□□ 0.34
PRPF8-216	ENST00000577001	USP49	Q70CQ1	688 aa		17.18	■□□□□ 0.34
PRPF8-216	ENST00000577001	DNAI1	Q9UI46	699 aa		17.18	■□□□□ 0.34
PRPF8-216	ENST00000577001	ZNF142	P52746	1687 aa	Predicted RBP	17.18	■□□□□ 0.34
PRPF8-216	ENST00000577001	IFIT3	O14879	490 aa	Known RBP	17.17	■□□□□ 0.34
PRPF8-216	ENST00000577001	AFM	P43652	599 aa		17.17	■□□□□ 0.34
PRPF8-216	ENST00000577001	TMEM67	Q5HYA8	995 aa		17.17	■□□□□ 0.34
PRPF8-216	ENST00000577001	NCOA7	Q8NI08	942 aa		17.17	■□□□□ 0.34
PRPF8-216	ENST00000577001	AIDA	Q96BJ3	306 aa		17.17	■□□□□ 0.34
PRPF8-216	ENST00000577001	MAP7D2	Q96T17	732 aa		17.17	■□□□□ 0.34
PRPF8-216	ENST00000577001	UTP14A	Q9BVJ6	771 aa	Known RBP	17.17	■□□□□ 0.34
PRPF8-216	ENST00000577001	ZBTB1	Q9Y2K1	713 aa		17.17	■□□□□ 0.34
PRPF8-216	ENST00000577001	KRT40	Q6A162	431 aa		17.17	■□□□□ 0.34
PRPF8-216	ENST00000577001	VPS37D	Q86XT2	251 aa		17.17	■□□□□ 0.34
PRPF8-216	ENST00000577001	SMYD4	Q8IYR2	804 aa	Predicted RBP	17.17	■□□□□ 0.34
PRPF8-216	ENST00000577001	SDR42E1	Q8WUS8	393 aa		17.17	■□□□□ 0.34
PRPF8-216	ENST00000577001	HELLS	Q9NRZ9	838 aa		17.17	■□□□□ 0.34
PRPF8-216	ENST00000577001	ADGRL3	Q9HAR2	1447 aa		17.17	■□□□□ 0.34
PRPF8-216	ENST00000577001	FMR1NB	Q8N0W7	255 aa	Predicted RBP	17.16	■□□□□ 0.34
PRPF8-216	ENST00000577001	ENGASE	Q8NFI3	743 aa		17.16	■□□□□ 0.34
PRPF8-216	ENST00000577001	DESI2	Q9BSY9	194 aa		17.16	■□□□□ 0.34
PRPF8-216	ENST00000577001	KIAA1468	Q9P260	1216 aa		17.16	■□□□□ 0.34
PRPF8-216	ENST00000577001	MBD4	O95243	580 aa		17.16	■□□□□ 0.34
PRPF8-216	ENST00000577001	SYK	P43405	635 aa		17.16	■□□□□ 0.34
PRPF8-216	ENST00000577001	BCAM	P50895	628 aa		17.16	■□□□□ 0.34
PRPF8-216	ENST00000577001	ADK	P55263	362 aa	Known RBP	17.16	■□□□□ 0.34
PRPF8-216	ENST00000577001	ANO1	Q5XXA6	986 aa		17.16	■□□□□ 0.34
PRPF8-216	ENST00000577001	KIF6	Q6ZMV9	814 aa		17.16	■□□□□ 0.34
PRPF8-216	ENST00000577001	PIGB	Q92521	554 aa		17.16	■□□□□ 0.34
PRPF8-216	ENST00000577001	NEDD4	P46934	1319 aa		17.16	■□□□□ 0.34
PRPF8-216	ENST00000577001	GOLGA8A	A7E2F4	631 aa		17.16	■□□□□ 0.34
PRPF8-216	ENST00000577001	IRS4	O14654	1257 aa	Predicted RBP	17.16	■□□□□ 0.34
PRPF8-216	ENST00000577001	ARMCX5	Q6P1M9	558 aa		17.16	■□□□□ 0.34
PRPF8-216	ENST00000577001	NBPF11	Q86T75	865 aa		17.16	■□□□□ 0.34
PRPF8-216	ENST00000577001	FBXO18	Q8NFZ0	1043 aa		17.16	■□□□□ 0.34
PRPF8-216	ENST00000577001	CDK11B	P21127	795 aa	Known RBP	17.15	■□□□□ 0.34
PRPF8-216	ENST00000577001	KARS	Q15046	597 aa	Known RBP	17.15	■□□□□ 0.34
PRPF8-216	ENST00000577001	DSCC1	Q9BVC3	393 aa		17.15	■□□□□ 0.34
PRPF8-216	ENST00000577001	FANCL	Q9NW38	375 aa		17.15	■□□□□ 0.34
PRPF8-216	ENST00000577001	PRDM4	Q9UKN5	801 aa		17.15	■□□□□ 0.34
PRPF8-216	ENST00000577001	CHD2	O14647	1828 aa	Known RBP	17.15	■□□□□ 0.34
PRPF8-216	ENST00000577001	RGPD5	Q99666	1765 aa		17.15	■□□□□ 0.34
PRPF8-216	ENST00000577001		A0A0U1RQG5	324 aa	Predicted RBP	17.15	■□□□□ 0.34
PRPF8-216	ENST00000577001	TFRC	P02786	760 aa	Known RBP	17.15	■□□□□ 0.34
PRPF8-216	ENST00000577001	CCZ1B	P86790	482 aa		17.15	■□□□□ 0.34
PRPF8-216	ENST00000577001	CCZ1	P86791	482 aa	Predicted RBP	17.15	■□□□□ 0.34
PRPF8-216	ENST00000577001	LONRF3	Q496Y0	759 aa		17.15	■□□□□ 0.34
PRPF8-216	ENST00000577001	SLC51A	Q86UW1	340 aa		17.15	■□□□□ 0.34
PRPF8-216	ENST00000577001	URI1	O94763	535 aa	Predicted RBP	17.15	■□□□□ 0.34
PRPF8-216	ENST00000577001	ZSCAN20	P17040	1043 aa	Predicted RBP	17.15	■□□□□ 0.34
PRPF8-216	ENST00000577001	NOM1	Q5C9Z4	860 aa	Known RBP	17.15	■□□□□ 0.34
PRPF8-216	ENST00000577001	NBPF3	Q9H094	633 aa		17.15	■□□□□ 0.34
PRPF8-216	ENST00000577001	MAPK8IP1	Q9UQF2	711 aa		17.15	■□□□□ 0.34
PRPF8-216	ENST00000577001	TUBGCP6	Q96RT7	1819 aa		17.14	■□□□□ 0.33
PRPF8-216	ENST00000577001	SFPQ	P23246	707 aa	Known RBP eCLIP	17.14	■□□□□ 0.33
PRPF8-216	ENST00000577001	TDO2	P48775	406 aa		17.14	■□□□□ 0.33
PRPF8-216	ENST00000577001	TSGA10IP	Q3SY00	556 aa		17.14	■□□□□ 0.33
PRPF8-216	ENST00000577001	POLR3G	O15318	223 aa	Predicted RBP	17.14	■□□□□ 0.33
PRPF8-216	ENST00000577001	HMGB1	P09429	215 aa	Known RBP	17.14	■□□□□ 0.33
PRPF8-216	ENST00000577001	TCIRG1	Q13488	830 aa		17.14	■□□□□ 0.33
PRPF8-216	ENST00000577001	OXER1	Q8TDS5	423 aa		17.14	■□□□□ 0.33
PRPF8-216	ENST00000577001	IRX2	Q9BZI1	471 aa	Predicted RBP	17.14	■□□□□ 0.33
PRPF8-216	ENST00000577001	CDC25A	P30304	524 aa		17.13	■□□□□ 0.33
PRPF8-216	ENST00000577001	KIF23	Q02241	960 aa	Predicted RBP	17.13	■□□□□ 0.33
PRPF8-216	ENST00000577001	PDE4B	Q07343	736 aa		17.13	■□□□□ 0.33
PRPF8-216	ENST00000577001	NAA16	Q6N069	864 aa	Predicted RBP	17.13	■□□□□ 0.33
PRPF8-216	ENST00000577001	HINFP	Q9BQA5	517 aa		17.13	■□□□□ 0.33
PRPF8-216	ENST00000577001		A0A0U1RQJ8	604 aa		17.13	■□□□□ 0.33
PRPF8-216	ENST00000577001	PRR29	P0C7W0	189 aa		17.13	■□□□□ 0.33
PRPF8-216	ENST00000577001	UBASH3A	P57075	661 aa		17.13	■□□□□ 0.33
PRPF8-216	ENST00000577001	FANCC	Q00597	558 aa		17.13	■□□□□ 0.33
PRPF8-216	ENST00000577001	ATRIP	Q8WXE1	791 aa		17.13	■□□□□ 0.33
PRPF8-216	ENST00000577001	NAPB	Q9H115	298 aa		17.13	■□□□□ 0.33
PRPF8-216	ENST00000577001	TACC3	Q9Y6A5	838 aa		17.13	■□□□□ 0.33
PRPF8-216	ENST00000577001	SH3TC1	Q8TE82	1336 aa		17.13	■□□□□ 0.33
PRPF8-216	ENST00000577001	ZBTB22	O15209	634 aa		17.13	■□□□□ 0.33

Retrieved 100 of 20,778 RNA–protein pairs in 21 ms