RNA–Protein interactions for RNA: ENST00000576958.1

PRPF8-215, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-215ENST00000576958 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.19■□□□□ 0.02
PRPF8-215ENST00000576958 FBXO33Q7Z6M2 555 aa15.19■□□□□ 0.02
PRPF8-215ENST00000576958 CD99L2Q8TCZ2 262 aa15.19■□□□□ 0.02
PRPF8-215ENST00000576958 CFHR5Q9BXR6 569 aa15.19■□□□□ 0.02
PRPF8-215ENST00000576958 USP44Q9H0E7 712 aa15.19■□□□□ 0.02
PRPF8-215ENST00000576958 TRIM17Q9Y577 477 aa15.19■□□□□ 0.02
PRPF8-215ENST00000576958 POTEFA5A3E0 1075 aa15.18■□□□□ 0.02
PRPF8-215ENST00000576958 MANSC4A6NHS7 340 aaPredicted RBP15.18■□□□□ 0.02
PRPF8-215ENST00000576958 MYO1BO43795 1136 aa15.18■□□□□ 0.02
PRPF8-215ENST00000576958 PPP1R12BO60237 982 aaPredicted RBP15.18■□□□□ 0.02
PRPF8-215ENST00000576958 MMP14P50281 582 aa15.18■□□□□ 0.02
PRPF8-215ENST00000576958 METTL24Q5JXM2 366 aa15.18■□□□□ 0.02
PRPF8-215ENST00000576958 FBXO46Q6PJ61 603 aaPredicted RBP15.18■□□□□ 0.02
PRPF8-215ENST00000576958 OTOP1Q7RTM1 612 aa15.18■□□□□ 0.02
PRPF8-215ENST00000576958 OPTNQ96CV9 577 aa15.18■□□□□ 0.02
PRPF8-215ENST00000576958 PPP2R3BQ9Y5P8 575 aa15.18■□□□□ 0.02
PRPF8-215ENST00000576958 ECM2O94769 699 aaPredicted RBP15.17■□□□□ 0.02
PRPF8-215ENST00000576958 RFX5P48382 616 aaPredicted RBP15.17■□□□□ 0.02
PRPF8-215ENST00000576958 VGLL4Q14135 290 aa15.17■□□□□ 0.02
PRPF8-215ENST00000576958 BRI3BPQ8WY22 251 aa15.17■□□□□ 0.02
PRPF8-215ENST00000576958 MS4A4AQ96JQ5 239 aa15.17■□□□□ 0.02
PRPF8-215ENST00000576958 SERPINA10Q9UK55 444 aa15.17■□□□□ 0.02
PRPF8-215ENST00000576958 ZBTB48P10074 688 aaPredicted RBP15.16■□□□□ 0.02
PRPF8-215ENST00000576958 IREB2P48200 963 aaKnown RBP15.16■□□□□ 0.02
PRPF8-215ENST00000576958 SUPT20HL1Q3ZLR7 823 aa15.16■□□□□ 0.02
PRPF8-215ENST00000576958 NOM1Q5C9Z4 860 aaKnown RBP15.16■□□□□ 0.02
PRPF8-215ENST00000576958 ANKRD13AQ8IZ07 590 aa15.16■□□□□ 0.02
PRPF8-215ENST00000576958 MROH5Q6ZUA9 1318 aa15.16■□□□□ 0.02
PRPF8-215ENST00000576958 PDE8BO95263 885 aa15.15■□□□□ 0.02
PRPF8-215ENST00000576958 FGFR2P21802 821 aa15.15■□□□□ 0.02
PRPF8-215ENST00000576958 PKN2Q16513 984 aaKnown RBP15.15■□□□□ 0.02
PRPF8-215ENST00000576958 FAM43AQ8N2R8 423 aa15.15■□□□□ 0.02
PRPF8-215ENST00000576958 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.15■□□□□ 0.02
PRPF8-215ENST00000576958 ZKSCAN4Q969J2 545 aaPredicted RBP15.15■□□□□ 0.02
PRPF8-215ENST00000576958 TESPA1A2RU30 521 aaPredicted RBP15.14■□□□□ 0.01
PRPF8-215ENST00000576958 SLURP2P0DP57 97 aa15.14■□□□□ 0.01
PRPF8-215ENST00000576958 SLFN5Q08AF3 891 aa15.14■□□□□ 0.01
PRPF8-215ENST00000576958 APOBEC3HQ6NTF7 200 aaKnown RBP15.14■□□□□ 0.01
PRPF8-215ENST00000576958 ATG9AQ7Z3C6 839 aa15.14■□□□□ 0.01
PRPF8-215ENST00000576958 OTUD5Q96G74 571 aa15.14■□□□□ 0.01
PRPF8-215ENST00000576958 ARHGAP39Q9C0H5 1083 aa15.14■□□□□ 0.01
PRPF8-215ENST00000576958 SNCAIPQ9Y6H5 919 aa15.14■□□□□ 0.01
PRPF8-215ENST00000576958 DIXDC1Q155Q3 683 aa15.13■□□□□ 0.01
PRPF8-215ENST00000576958 VPS37DQ86XT2 251 aa15.13■□□□□ 0.01
PRPF8-215ENST00000576958 SIL1Q9H173 461 aa15.13■□□□□ 0.01
PRPF8-215ENST00000576958 MYH13Q9UKX3 1938 aa15.13■□□□□ 0.01
PRPF8-215ENST00000576958 CCL15-CCL14A0A0B4J2E2 113 aa15.12■□□□□ 0.01
PRPF8-215ENST00000576958 FRAT2O75474 233 aaPredicted RBP15.12■□□□□ 0.01
PRPF8-215ENST00000576958 ALDH1A1P00352 501 aa15.12■□□□□ 0.01
PRPF8-215ENST00000576958 MYCP01106 439 aaPredicted RBP15.12■□□□□ 0.01
PRPF8-215ENST00000576958 CCL15Q16663 113 aa15.12■□□□□ 0.01
PRPF8-215ENST00000576958 MIGA2Q7L4E1 593 aa15.12■□□□□ 0.01
PRPF8-215ENST00000576958 PA2G4Q9UQ80 394 aaKnown RBP15.12■□□□□ 0.01
PRPF8-215ENST00000576958 PTPN22Q9Y2R2 807 aa15.12■□□□□ 0.01
PRPF8-215ENST00000576958 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.12■□□□□ 0.01
PRPF8-215ENST00000576958 INHBEP58166 350 aa15.11■□□□□ 0.01
PRPF8-215ENST00000576958 MAP3K9P80192 1104 aa15.11■□□□□ 0.01
PRPF8-215ENST00000576958 NFIAQ12857 509 aa15.11■□□□□ 0.01
PRPF8-215ENST00000576958 ZFPM1Q8IX07 1006 aa15.11■□□□□ 0.01
PRPF8-215ENST00000576958 TEKT1Q969V4 418 aa15.11■□□□□ 0.01
PRPF8-215ENST00000576958 TNNQ9UQP3 1299 aa15.11■□□□□ 0.01
PRPF8-215ENST00000576958 PTPRCP08575 1304 aa15.11■□□□□ 0.01
PRPF8-215ENST00000576958 EYA2O00167 538 aa15.1■□□□□ 0.01
PRPF8-215ENST00000576958 EN2P19622 333 aaPredicted RBP15.1■□□□□ 0.01
PRPF8-215ENST00000576958 PRDX5P30044 214 aa15.1■□□□□ 0.01
PRPF8-215ENST00000576958 ADORA1P30542 326 aa15.1■□□□□ 0.01
PRPF8-215ENST00000576958 INPP5BP32019 993 aa15.1■□□□□ 0.01
PRPF8-215ENST00000576958 TNFAIP1Q13829 316 aa15.1■□□□□ 0.01
PRPF8-215ENST00000576958 PUM3Q15397 648 aaKnown RBP15.1■□□□□ 0.01
PRPF8-215ENST00000576958 CAVIN4Q5BKX8 364 aa15.1■□□□□ 0.01
PRPF8-215ENST00000576958 ZDHHC15Q96MV8 337 aa15.1■□□□□ 0.01
PRPF8-215ENST00000576958 WRNIP1Q96S55 665 aa15.1■□□□□ 0.01
PRPF8-215ENST00000576958 KIAA0100Q14667 2235 aaKnown RBP15.09■□□□□ 0.01
PRPF8-215ENST00000576958 E9PSI1 815 aa15.09■□□□□ 0.01
PRPF8-215ENST00000576958 IRF6O14896 467 aa15.09■□□□□ 0.01
PRPF8-215ENST00000576958 CTGFP29279 349 aa15.09■□□□□ 0.01
PRPF8-215ENST00000576958 SP3Q02447 781 aa15.09■□□□□ 0.01
PRPF8-215ENST00000576958 TCP10Q12799 353 aa15.09■□□□□ 0.01
PRPF8-215ENST00000576958 TAF1CQ15572 869 aaPredicted RBP15.09■□□□□ 0.01
PRPF8-215ENST00000576958 PRPF38BQ5VTL8 546 aaKnown RBP15.09■□□□□ 0.01
PRPF8-215ENST00000576958 EFCC1Q9HA90 598 aa15.09■□□□□ 0.01
PRPF8-215ENST00000576958 SMC4Q9NTJ3 1288 aa15.09■□□□□ 0.01
PRPF8-215ENST00000576958 DAGLAQ9Y4D2 1042 aa15.09■□□□□ 0.01
PRPF8-215ENST00000576958 PTCH2Q9Y6C5 1203 aa15.09■□□□□ 0.01
PRPF8-215ENST00000576958 SPDYE5A6NIY4 337 aa15.08■□□□□ 0
PRPF8-215ENST00000576958 BTBD19C9JJ37 291 aa15.08■□□□□ 0
PRPF8-215ENST00000576958 PHKA1P46020 1223 aa15.08■□□□□ 0
PRPF8-215ENST00000576958 CDC42EP5Q6NZY7 148 aa15.08■□□□□ 0
PRPF8-215ENST00000576958 ERO1AQ96HE7 468 aa15.08■□□□□ 0
PRPF8-215ENST00000576958 NOB1Q9ULX3 412 aaKnown RBP15.08■□□□□ 0
PRPF8-215ENST00000576958 LRRFIP2Q9Y608 721 aaKnown RBP15.08■□□□□ 0
PRPF8-215ENST00000576958 RBBP6Q7Z6E9 1792 aaKnown RBP15.07■□□□□ 0
PRPF8-215ENST00000576958 UNCXA6NJT0 531 aa15.07■□□□□ 0
PRPF8-215ENST00000576958 TNNI2P48788 182 aa15.07■□□□□ 0
PRPF8-215ENST00000576958 TRMT2AQ8IZ69 625 aaKnown RBP15.07■□□□□ 0
PRPF8-215ENST00000576958 TBC1D22AQ8WUA7 517 aa15.07■□□□□ 0
PRPF8-215ENST00000576958 MEIS3Q99687 375 aa15.07■□□□□ 0
PRPF8-215ENST00000576958 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.07■□□□□ 0
PRPF8-215ENST00000576958 FAM198AQ9UFP1 575 aa15.07■□□□□ 0
PRPF8-215ENST00000576958 CSADQ9Y600 493 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms