RNA–Protein interactions for RNA: ENST00000576484.1

CDC27-219, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-219ENST00000576484 C19orf57Q0VDD7 668 aa8.46□□□□□ -1.06
CDC27-219ENST00000576484 ANKRD24Q8TF21 1146 aa8.46□□□□□ -1.06
CDC27-219ENST00000576484 SOX17Q9H6I2 414 aaPredicted RBP8.46□□□□□ -1.06
CDC27-219ENST00000576484 OSGEPQ9NPF4 335 aa8.46□□□□□ -1.06
CDC27-219ENST00000576484 KCNK4Q9NYG8 393 aa8.46□□□□□ -1.06
CDC27-219ENST00000576484 DLL1O00548 723 aa8.45□□□□□ -1.06
CDC27-219ENST00000576484 DDX3YO15523 660 aaKnown RBP8.45□□□□□ -1.06
CDC27-219ENST00000576484 ADAM11O75078 769 aa8.45□□□□□ -1.06
CDC27-219ENST00000576484 DOC2BQ14184 412 aa8.45□□□□□ -1.06
CDC27-219ENST00000576484 KLHL23Q8NBE8 558 aa8.45□□□□□ -1.06
CDC27-219ENST00000576484 TRIM56Q9BRZ2 755 aaKnown RBP8.45□□□□□ -1.06
CDC27-219ENST00000576484 ENC1O14682 589 aa8.44□□□□□ -1.06
CDC27-219ENST00000576484 CELA3AP09093 270 aa8.44□□□□□ -1.06
CDC27-219ENST00000576484 ARL4DP49703 201 aa8.44□□□□□ -1.06
CDC27-219ENST00000576484 NLRP12P59046 1061 aa8.44□□□□□ -1.06
CDC27-219ENST00000576484 GSTM4Q03013 218 aa8.44□□□□□ -1.06
CDC27-219ENST00000576484 TSNAXIP1Q2TAA8 658 aa8.44□□□□□ -1.06
CDC27-219ENST00000576484 NECAB3Q96P71 396 aaPredicted RBP8.44□□□□□ -1.06
CDC27-219ENST00000576484 BACH2Q9BYV9 841 aa8.44□□□□□ -1.06
CDC27-219ENST00000576484 NRSN2Q9GZP1 204 aa8.44□□□□□ -1.06
CDC27-219ENST00000576484 TMEM39AQ9NV64 488 aa8.44□□□□□ -1.06
CDC27-219ENST00000576484 USP31Q70CQ4 1352 aa8.44□□□□□ -1.06
CDC27-219ENST00000576484 CD68P34810 354 aaPredicted RBP8.43□□□□□ -1.06
CDC27-219ENST00000576484 ST13P50502 369 aaKnown RBP8.43□□□□□ -1.06
CDC27-219ENST00000576484 SUZ12Q15022 739 aaKnown RBP8.43□□□□□ -1.06
CDC27-219ENST00000576484 TAF1CQ15572 869 aaPredicted RBP8.43□□□□□ -1.06
CDC27-219ENST00000576484 LENG1Q96BZ8 264 aaPredicted RBP8.43□□□□□ -1.06
CDC27-219ENST00000576484 PAGE1O75459 146 aa8.42□□□□□ -1.06
CDC27-219ENST00000576484 WISP1O95388 367 aa8.42□□□□□ -1.06
CDC27-219ENST00000576484 FURINP09958 794 aa8.42□□□□□ -1.06
CDC27-219ENST00000576484 NRG1Q02297 640 aaPredicted RBP8.42□□□□□ -1.06
CDC27-219ENST00000576484 MBTPS1Q14703 1052 aa8.42□□□□□ -1.06
CDC27-219ENST00000576484 IGF2-ASQ6U949 168 aa8.42□□□□□ -1.06
CDC27-219ENST00000576484 UBASH3BQ8TF42 649 aa8.42□□□□□ -1.06
CDC27-219ENST00000576484 CEP44Q9C0F1 390 aa8.42□□□□□ -1.06
CDC27-219ENST00000576484 ECEL1O95672 775 aa8.41□□□□□ -1.06
CDC27-219ENST00000576484 IREB2P48200 963 aaKnown RBP8.41□□□□□ -1.06
CDC27-219ENST00000576484 PPP2R3AQ06190 1150 aa8.41□□□□□ -1.06
CDC27-219ENST00000576484 CCDC85BQ15834 202 aaPredicted RBP8.41□□□□□ -1.06
CDC27-219ENST00000576484 TMEM87AQ8NBN3 555 aa8.41□□□□□ -1.06
CDC27-219ENST00000576484 STK35Q8TDR2 534 aa8.41□□□□□ -1.06
CDC27-219ENST00000576484 DCAF11Q8TEB1 546 aa8.41□□□□□ -1.06
CDC27-219ENST00000576484 ALX3O95076 343 aa8.4□□□□□ -1.06
CDC27-219ENST00000576484 CTSBP07858 339 aa8.4□□□□□ -1.06
CDC27-219ENST00000576484 ADGRE1Q14246 886 aa8.4□□□□□ -1.06
CDC27-219ENST00000576484 SV2BQ7L1I2 683 aa8.4□□□□□ -1.06
CDC27-219ENST00000576484 SULF2Q8IWU5 870 aa8.4□□□□□ -1.06
CDC27-219ENST00000576484 USP26Q9BXU7 913 aa8.4□□□□□ -1.06
CDC27-219ENST00000576484 LOC100289279A0A1B0GTE1 492 aa8.39□□□□□ -1.07
CDC27-219ENST00000576484 AP3B2Q13367 1082 aa8.39□□□□□ -1.07
CDC27-219ENST00000576484 RASIP1Q5U651 963 aa8.39□□□□□ -1.07
CDC27-219ENST00000576484 TXNRD3Q86VQ6 643 aa8.39□□□□□ -1.07
CDC27-219ENST00000576484 DDX54Q8TDD1 881 aaKnown RBP8.39□□□□□ -1.07
CDC27-219ENST00000576484 WFDC12Q8WWY7 111 aa8.39□□□□□ -1.07
CDC27-219ENST00000576484 DLGAP3O95886 979 aa8.38□□□□□ -1.07
CDC27-219ENST00000576484 NME2P22392 152 aa8.38□□□□□ -1.07
CDC27-219ENST00000576484 MAOBP27338 520 aa8.38□□□□□ -1.07
CDC27-219ENST00000576484 POU4F3Q15319 338 aa8.38□□□□□ -1.07
CDC27-219ENST00000576484 PCNX4Q63HM2 1172 aa8.38□□□□□ -1.07
CDC27-219ENST00000576484 PDZD3Q86UT5 571 aa8.38□□□□□ -1.07
CDC27-219ENST00000576484 AGGF1Q8N302 714 aaeCLIP8.38□□□□□ -1.07
CDC27-219ENST00000576484 NOC4LQ9BVI4 516 aaKnown RBP8.38□□□□□ -1.07
CDC27-219ENST00000576484 TPSG1Q9NRR2 321 aa8.38□□□□□ -1.07
CDC27-219ENST00000576484 CYP11A1P05108 521 aa8.37□□□□□ -1.07
CDC27-219ENST00000576484 NOS3P29474 1203 aa8.37□□□□□ -1.07
CDC27-219ENST00000576484 FANCCQ00597 558 aa8.37□□□□□ -1.07
CDC27-219ENST00000576484 MAP3K11Q16584 847 aa8.37□□□□□ -1.07
CDC27-219ENST00000576484 DUOXA2Q1HG44 320 aa8.37□□□□□ -1.07
CDC27-219ENST00000576484 KIAA1211Q6ZU35 1233 aa8.37□□□□□ -1.07
CDC27-219ENST00000576484 ACAD11Q709F0 780 aa8.37□□□□□ -1.07
CDC27-219ENST00000576484 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.37□□□□□ -1.07
CDC27-219ENST00000576484 MRPL18Q9H0U6 180 aaKnown RBP8.37□□□□□ -1.07
CDC27-219ENST00000576484 AKTIPQ9H8T0 292 aa8.37□□□□□ -1.07
CDC27-219ENST00000576484 F6X3S4 739 aa8.36□□□□□ -1.07
CDC27-219ENST00000576484 GSTP1P09211 210 aaKnown RBP8.36□□□□□ -1.07
CDC27-219ENST00000576484 BMP6P22004 513 aa8.36□□□□□ -1.07
CDC27-219ENST00000576484 TTBK2Q6IQ55 1244 aa8.36□□□□□ -1.07
CDC27-219ENST00000576484 CORO1BQ9BR76 489 aa8.36□□□□□ -1.07
CDC27-219ENST00000576484 F8W735 103 aaPredicted RBP8.35□□□□□ -1.07
CDC27-219ENST00000576484 SCAMP3O14828 347 aaKnown RBP8.35□□□□□ -1.07
CDC27-219ENST00000576484 EIF4EBP3O60516 100 aaPredicted RBP8.35□□□□□ -1.07
CDC27-219ENST00000576484 GLB1P16278 677 aa8.35□□□□□ -1.07
CDC27-219ENST00000576484 ARNTP27540 789 aa8.35□□□□□ -1.07
CDC27-219ENST00000576484 LIG3P49916 1009 aa8.35□□□□□ -1.07
CDC27-219ENST00000576484 ZNF252P-AS1Q0IIN9 211 aa8.35□□□□□ -1.07
CDC27-219ENST00000576484 GRIN3AQ8TCU5 1115 aa8.35□□□□□ -1.07
CDC27-219ENST00000576484 TP53INP1Q96A56 240 aa8.35□□□□□ -1.07
CDC27-219ENST00000576484 ZC3H12CQ9C0D7 883 aaKnown RBP8.35□□□□□ -1.07
CDC27-219ENST00000576484 E9PSI1 815 aa8.34□□□□□ -1.07
CDC27-219ENST00000576484 ZNF76P36508 570 aa8.34□□□□□ -1.07
CDC27-219ENST00000576484 ERMP1Q7Z2K6 904 aa8.34□□□□□ -1.07
CDC27-219ENST00000576484 RUSC1Q9BVN2 902 aa8.34□□□□□ -1.07
CDC27-219ENST00000576484 SEMA6BQ9H3T3 888 aa8.34□□□□□ -1.07
CDC27-219ENST00000576484 CCDC86Q9H6F5 360 aaKnown RBP8.34□□□□□ -1.07
CDC27-219ENST00000576484 CBX8Q9HC52 389 aa8.34□□□□□ -1.07
CDC27-219ENST00000576484 METTL5Q9NRN9 209 aaKnown RBP8.34□□□□□ -1.07
CDC27-219ENST00000576484 SAMM50Q9Y512 469 aa8.34□□□□□ -1.07
CDC27-219ENST00000576484 MAP1SQ66K74 1059 aaPredicted RBP8.33□□□□□ -1.08
CDC27-219ENST00000576484 MPRIPQ6WCQ1 1025 aa8.33□□□□□ -1.08
CDC27-219ENST00000576484 HS2ST1Q7LGA3 356 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms