RNA–Protein interactions for RNA: ENST00000576348.1

ERCC4-208, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-208ENST00000576348 FKBP1AP62942 108 aaKnown RBP19.81■□□□□ 0.76
ERCC4-208ENST00000576348 DACT2Q5SW24 774 aa19.81■□□□□ 0.76
ERCC4-208ENST00000576348 KCNQ5Q9NR82 932 aa19.81■□□□□ 0.76
ERCC4-208ENST00000576348 CCDC171Q6TFL3 1326 aa19.8■□□□□ 0.76
ERCC4-208ENST00000576348 MYO3BQ8WXR4 1341 aa19.8■□□□□ 0.76
ERCC4-208ENST00000576348 SEC24BO95487 1268 aa19.8■□□□□ 0.76
ERCC4-208ENST00000576348 CHGBP05060 677 aa19.8■□□□□ 0.76
ERCC4-208ENST00000576348 TNIP1Q15025 636 aa19.8■□□□□ 0.76
ERCC4-208ENST00000576348 SLFNL1Q499Z3 407 aa19.8■□□□□ 0.76
ERCC4-208ENST00000576348 CIAPIN1Q6FI81 312 aa19.8■□□□□ 0.76
ERCC4-208ENST00000576348 OSBP2Q969R2 916 aa19.8■□□□□ 0.76
ERCC4-208ENST00000576348 NSUN4Q96CB9 384 aaKnown RBP19.8■□□□□ 0.76
ERCC4-208ENST00000576348 SEC62Q99442 399 aaKnown RBP19.8■□□□□ 0.76
ERCC4-208ENST00000576348 MXD3Q9BW11 206 aa19.8■□□□□ 0.76
ERCC4-208ENST00000576348 TTF2Q9UNY4 1162 aaKnown RBP19.8■□□□□ 0.76
ERCC4-208ENST00000576348 MAGEB6P1A0A0J9YX57 407 aa19.79■□□□□ 0.76
ERCC4-208ENST00000576348 M0R2C6 588 aa19.79■□□□□ 0.76
ERCC4-208ENST00000576348 MCCP23508 829 aa19.79■□□□□ 0.76
ERCC4-208ENST00000576348 CCDC129Q6ZRS4 1044 aa19.79■□□□□ 0.76
ERCC4-208ENST00000576348 TCRBV5S4A2TA0A5A2 114 aa19.78■□□□□ 0.76
ERCC4-208ENST00000576348 PSMD14O00487 310 aa19.78■□□□□ 0.76
ERCC4-208ENST00000576348 MBD4O95243 580 aa19.78■□□□□ 0.76
ERCC4-208ENST00000576348 GRIK5Q16478 980 aa19.78■□□□□ 0.76
ERCC4-208ENST00000576348 RSBN1LQ6PCB5 846 aaPredicted RBP19.78■□□□□ 0.76
ERCC4-208ENST00000576348 CERS5Q8N5B7 392 aa19.78■□□□□ 0.76
ERCC4-208ENST00000576348 MIGA1Q8NAN2 632 aa19.78■□□□□ 0.76
ERCC4-208ENST00000576348 PUS7LQ9H0K6 701 aaKnown RBP19.78■□□□□ 0.76
ERCC4-208ENST00000576348 AKAP11Q9UKA4 1901 aa19.78■□□□□ 0.76
ERCC4-208ENST00000576348 ARFGEF1Q9Y6D6 1849 aa19.77■□□□□ 0.76
ERCC4-208ENST00000576348 DCAF8L1A6NGE4 600 aa19.77■□□□□ 0.76
ERCC4-208ENST00000576348 GPAA1O43292 621 aa19.77■□□□□ 0.76
ERCC4-208ENST00000576348 BAG3O95817 575 aa19.77■□□□□ 0.76
ERCC4-208ENST00000576348 CXCL9Q07325 125 aa19.77■□□□□ 0.76
ERCC4-208ENST00000576348 DIXDC1Q155Q3 683 aa19.77■□□□□ 0.76
ERCC4-208ENST00000576348 ZNF589Q86UQ0 364 aaPredicted RBP19.77■□□□□ 0.76
ERCC4-208ENST00000576348 KIAA0825Q8IV33 1275 aa19.77■□□□□ 0.76
ERCC4-208ENST00000576348 RNF181Q9P0P0 153 aa19.77■□□□□ 0.76
ERCC4-208ENST00000576348 HDAC9Q9UKV0 1011 aa19.77■□□□□ 0.76
ERCC4-208ENST00000576348 APPP05067 770 aa19.76■□□□□ 0.75
ERCC4-208ENST00000576348 VIL1P09327 827 aaKnown RBP19.76■□□□□ 0.75
ERCC4-208ENST00000576348 TEKT1Q969V4 418 aa19.76■□□□□ 0.75
ERCC4-208ENST00000576348 IL25Q9H293 177 aa19.76■□□□□ 0.75
ERCC4-208ENST00000576348 ARMT1Q9H993 441 aa19.76■□□□□ 0.75
ERCC4-208ENST00000576348 GJA3Q9Y6H8 435 aa19.76■□□□□ 0.75
ERCC4-208ENST00000576348 MROH7-TTC4A0A0A0MT08 1334 aa19.76■□□□□ 0.75
ERCC4-208ENST00000576348 AK9Q5TCS8 1911 aa19.75■□□□□ 0.75
ERCC4-208ENST00000576348 GNAT2P19087 354 aa19.75■□□□□ 0.75
ERCC4-208ENST00000576348 SCNN1DP51172 638 aa19.75■□□□□ 0.75
ERCC4-208ENST00000576348 RBM5P52756 815 aaKnown RBP eCLIP19.75■□□□□ 0.75
ERCC4-208ENST00000576348 CERS3Q8IU89 383 aa19.75■□□□□ 0.75
ERCC4-208ENST00000576348 OGFOD1Q8N543 542 aa19.75■□□□□ 0.75
ERCC4-208ENST00000576348 FER1L6Q2WGJ9 1857 aa19.75■□□□□ 0.75
ERCC4-208ENST00000576348 PLCG2P16885 1265 aa19.74■□□□□ 0.75
ERCC4-208ENST00000576348 PRELPP51888 382 aa19.74■□□□□ 0.75
ERCC4-208ENST00000576348 C9orf131Q5VYM1 1079 aa19.74■□□□□ 0.75
ERCC4-208ENST00000576348 ADGRA1Q86SQ6 560 aa19.74■□□□□ 0.75
ERCC4-208ENST00000576348 AGBL3Q8NEM8 1001 aa19.74■□□□□ 0.75
ERCC4-208ENST00000576348 C22orf23Q9BZE7 217 aa19.74■□□□□ 0.75
ERCC4-208ENST00000576348 LSG1Q9H089 658 aaKnown RBP19.74■□□□□ 0.75
ERCC4-208ENST00000576348 AATFQ9NY61 560 aaKnown RBP eCLIP19.74■□□□□ 0.75
ERCC4-208ENST00000576348 COL4A5P29400 1685 aa19.74■□□□□ 0.75
ERCC4-208ENST00000576348 MYH13Q9UKX3 1938 aa19.73■□□□□ 0.75
ERCC4-208ENST00000576348 FZD9O00144 591 aa19.73■□□□□ 0.75
ERCC4-208ENST00000576348 EPB41L2O43491 1005 aaKnown RBP19.73■□□□□ 0.75
ERCC4-208ENST00000576348 BTDP43251 543 aa19.73■□□□□ 0.75
ERCC4-208ENST00000576348 LCORLQ8N3X6 602 aa19.73■□□□□ 0.75
ERCC4-208ENST00000576348 ZNF384Q8TF68 577 aa19.73■□□□□ 0.75
ERCC4-208ENST00000576348 DDRGK1Q96HY6 314 aa19.73■□□□□ 0.75
ERCC4-208ENST00000576348 STRBPQ96SI9 672 aaKnown RBP19.73■□□□□ 0.75
ERCC4-208ENST00000576348 USP26Q9BXU7 913 aa19.73■□□□□ 0.75
ERCC4-208ENST00000576348 CRNKL1Q9BZJ0 848 aaKnown RBP19.73■□□□□ 0.75
ERCC4-208ENST00000576348 NACAP1Q9BZK3 213 aa19.73■□□□□ 0.75
ERCC4-208ENST00000576348 SLC4A4Q9Y6R1 1079 aa19.73■□□□□ 0.75
ERCC4-208ENST00000576348 U3KPZ7 1027 aaPredicted RBP19.73■□□□□ 0.75
ERCC4-208ENST00000576348 RPS12P25398 132 aaKnown RBP19.72■□□□□ 0.75
ERCC4-208ENST00000576348 DYNLL1P63167 89 aaKnown RBP19.72■□□□□ 0.75
ERCC4-208ENST00000576348 HDLBPQ00341 1268 aaKnown RBP19.72■□□□□ 0.75
ERCC4-208ENST00000576348 PTH1RQ03431 593 aa19.72■□□□□ 0.75
ERCC4-208ENST00000576348 FAM163AQ96GL9 167 aaPredicted RBP19.72■□□□□ 0.75
ERCC4-208ENST00000576348 DSCC1Q9BVC3 393 aa19.72■□□□□ 0.75
ERCC4-208ENST00000576348 CTNNA3Q9UI47 895 aa19.72■□□□□ 0.75
ERCC4-208ENST00000576348 ZBTB12Q9Y330 459 aaPredicted RBP19.72■□□□□ 0.75
ERCC4-208ENST00000576348 USP17L8P0C7I0 530 aa19.71■□□□□ 0.75
ERCC4-208ENST00000576348 HSPD1P10809 573 aaKnown RBP19.71■□□□□ 0.75
ERCC4-208ENST00000576348 CRKP46108 304 aa19.71■□□□□ 0.75
ERCC4-208ENST00000576348 HHIPL2Q6UWX4 724 aa19.71■□□□□ 0.75
ERCC4-208ENST00000576348 SERPINA10Q9UK55 444 aa19.71■□□□□ 0.75
ERCC4-208ENST00000576348 DAGLAQ9Y4D2 1042 aa19.71■□□□□ 0.75
ERCC4-208ENST00000576348 GPR75-ASB3A0A0A6YYF3 556 aa19.7■□□□□ 0.74
ERCC4-208ENST00000576348 USP5P45974 858 aa19.7■□□□□ 0.74
ERCC4-208ENST00000576348 TDO2P48775 406 aa19.7■□□□□ 0.74
ERCC4-208ENST00000576348 RNF20Q5VTR2 975 aa19.7■□□□□ 0.74
ERCC4-208ENST00000576348 RIOK1Q9BRS2 568 aaKnown RBP19.7■□□□□ 0.74
ERCC4-208ENST00000576348 MRIQ9BWK5 157 aa19.7■□□□□ 0.74
ERCC4-208ENST00000576348 RBM8AQ9Y5S9 174 aaKnown RBP19.7■□□□□ 0.74
ERCC4-208ENST00000576348 GAKO14976 1311 aa19.7■□□□□ 0.74
ERCC4-208ENST00000576348 ZNF541Q9H0D2 1346 aa19.7■□□□□ 0.74
ERCC4-208ENST00000576348 DOCK2Q92608 1830 aa19.69■□□□□ 0.74
ERCC4-208ENST00000576348 PATL2C9JE40 543 aaKnown RBP19.69■□□□□ 0.74
ERCC4-208ENST00000576348 GMPSP49915 693 aaPredicted RBP19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms