RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 MYOZ2Q9NPC6 264 aa17.02■□□□□ 0.32
RPAIN-217ENST00000575711 LRP2BPQ9P2M1 347 aa17.02■□□□□ 0.32
RPAIN-217ENST00000575711 STAP2Q9UGK3 403 aa17.02■□□□□ 0.32
RPAIN-217ENST00000575711 NDUFB9Q9Y6M9 179 aa17.02■□□□□ 0.32
RPAIN-217ENST00000575711 SCN4AP35499 1836 aa17.01■□□□□ 0.31
RPAIN-217ENST00000575711 KIF4BQ2VIQ3 1234 aa17.01■□□□□ 0.31
RPAIN-217ENST00000575711 USP50Q70EL3 339 aaPredicted RBP17.01■□□□□ 0.31
RPAIN-217ENST00000575711 SAMD7Q7Z3H4 446 aa17.01■□□□□ 0.31
RPAIN-217ENST00000575711 PNMA8AQ86V59 439 aaPredicted RBP17.01■□□□□ 0.31
RPAIN-217ENST00000575711 DZIP1Q86YF9 867 aaKnown RBP17.01■□□□□ 0.31
RPAIN-217ENST00000575711 PI4K2BQ8TCG2 481 aa17.01■□□□□ 0.31
RPAIN-217ENST00000575711 PAG1Q9NWQ8 432 aa17.01■□□□□ 0.31
RPAIN-217ENST00000575711 RAI14Q9P0K7 980 aa17.01■□□□□ 0.31
RPAIN-217ENST00000575711 AOX1Q06278 1338 aa17■□□□□ 0.31
RPAIN-217ENST00000575711 GOLIM4O00461 696 aa17■□□□□ 0.31
RPAIN-217ENST00000575711 IGSF3O75054 1194 aa17■□□□□ 0.31
RPAIN-217ENST00000575711 HDLBPQ00341 1268 aaKnown RBP17■□□□□ 0.31
RPAIN-217ENST00000575711 TBC1D10BQ4KMP7 808 aaPredicted RBP17■□□□□ 0.31
RPAIN-217ENST00000575711 EAPPQ56P03 285 aaPredicted RBP17■□□□□ 0.31
RPAIN-217ENST00000575711 RBM26Q5T8P6 1007 aaKnown RBP17■□□□□ 0.31
RPAIN-217ENST00000575711 ANTXR1Q9H6X2 564 aa17■□□□□ 0.31
RPAIN-217ENST00000575711 PIH1D3Q9NQM4 214 aaKnown RBP17■□□□□ 0.31
RPAIN-217ENST00000575711 SERPINA10Q9UK55 444 aa17■□□□□ 0.31
RPAIN-217ENST00000575711 IDH1O75874 414 aaKnown RBP16.99■□□□□ 0.31
RPAIN-217ENST00000575711 PDE4AP27815 886 aa16.99■□□□□ 0.31
RPAIN-217ENST00000575711 CRKP46108 304 aa16.99■□□□□ 0.31
RPAIN-217ENST00000575711 RBM5P52756 815 aaKnown RBP eCLIP16.99■□□□□ 0.31
RPAIN-217ENST00000575711 DLGAP5Q15398 846 aa16.99■□□□□ 0.31
RPAIN-217ENST00000575711 CFAP100Q494V2 611 aa16.99■□□□□ 0.31
RPAIN-217ENST00000575711 PLEKHM2Q8IWE5 1019 aa16.99■□□□□ 0.31
RPAIN-217ENST00000575711 SLF2Q8IX21 1173 aa16.99■□□□□ 0.31
RPAIN-217ENST00000575711 TRPM4Q8TD43 1214 aa16.99■□□□□ 0.31
RPAIN-217ENST00000575711 TEKT1Q969V4 418 aa16.99■□□□□ 0.31
RPAIN-217ENST00000575711 OSBPL3Q9H4L5 887 aa16.99■□□□□ 0.31
RPAIN-217ENST00000575711 AKAP11Q9UKA4 1901 aa16.99■□□□□ 0.31
RPAIN-217ENST00000575711 EGFRP00533 1210 aa16.98■□□□□ 0.31
RPAIN-217ENST00000575711 GSTO1P78417 241 aa16.98■□□□□ 0.31
RPAIN-217ENST00000575711 MECOMQ03112 1051 aa16.98■□□□□ 0.31
RPAIN-217ENST00000575711 MAP3K12Q12852 859 aa16.98■□□□□ 0.31
RPAIN-217ENST00000575711 MTMR14Q8NCE2 650 aa16.98■□□□□ 0.31
RPAIN-217ENST00000575711 EDC3Q96F86 508 aaKnown RBP16.98■□□□□ 0.31
RPAIN-217ENST00000575711 MRIQ9BWK5 157 aa16.98■□□□□ 0.31
RPAIN-217ENST00000575711 KIF3CO14782 793 aa16.97■□□□□ 0.31
RPAIN-217ENST00000575711 DIXDC1Q155Q3 683 aa16.97■□□□□ 0.31
RPAIN-217ENST00000575711 HHIPL2Q6UWX4 724 aa16.97■□□□□ 0.31
RPAIN-217ENST00000575711 NSUN4Q96CB9 384 aaKnown RBP16.97■□□□□ 0.31
RPAIN-217ENST00000575711 SPDYE2BA6NHP3 402 aa16.96■□□□□ 0.31
RPAIN-217ENST00000575711 WNT10BO00744 389 aa16.96■□□□□ 0.31
RPAIN-217ENST00000575711 LDHCP07864 332 aa16.96■□□□□ 0.31
RPAIN-217ENST00000575711 SPDYE6P0CI01 402 aa16.96■□□□□ 0.31
RPAIN-217ENST00000575711 HIRAP54198 1017 aaPredicted RBP16.96■□□□□ 0.31
RPAIN-217ENST00000575711 CACNB1Q02641 598 aaPredicted RBP16.96■□□□□ 0.31
RPAIN-217ENST00000575711 NAA16Q6N069 864 aaPredicted RBP16.96■□□□□ 0.31
RPAIN-217ENST00000575711 LDHDQ86WU2 507 aa16.96■□□□□ 0.31
RPAIN-217ENST00000575711 ZDHHC15Q96MV8 337 aa16.96■□□□□ 0.31
RPAIN-217ENST00000575711 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.96■□□□□ 0.31
RPAIN-217ENST00000575711 CLEC11AQ9Y240 323 aa16.96■□□□□ 0.31
RPAIN-217ENST00000575711 MYO1BO43795 1136 aa16.95■□□□□ 0.3
RPAIN-217ENST00000575711 MAP4K4O95819 1239 aaPredicted RBP16.95■□□□□ 0.3
RPAIN-217ENST00000575711 TMED8Q6PL24 325 aaPredicted RBP16.95■□□□□ 0.3
RPAIN-217ENST00000575711 ZC3H15Q8WU90 426 aaKnown RBP16.95■□□□□ 0.3
RPAIN-217ENST00000575711 PCDHAC2Q9Y5I4 1007 aa16.95■□□□□ 0.3
RPAIN-217ENST00000575711 MROH7-TTC4A0A0A0MT08 1334 aa16.95■□□□□ 0.3
RPAIN-217ENST00000575711 NBPF9Q3BBW0 867 aa16.94■□□□□ 0.3
RPAIN-217ENST00000575711 MAGEB6Q8N7X4 407 aa16.94■□□□□ 0.3
RPAIN-217ENST00000575711 KBTBD3Q8NAB2 608 aa16.94■□□□□ 0.3
RPAIN-217ENST00000575711 ZNF384Q8TF68 577 aa16.94■□□□□ 0.3
RPAIN-217ENST00000575711 FAM163AQ96GL9 167 aaPredicted RBP16.94■□□□□ 0.3
RPAIN-217ENST00000575711 ZBED3Q96IU2 234 aaPredicted RBP16.94■□□□□ 0.3
RPAIN-217ENST00000575711 PRMT6Q96LA8 375 aaPredicted RBP16.94■□□□□ 0.3
RPAIN-217ENST00000575711 DAGLAQ9Y4D2 1042 aa16.94■□□□□ 0.3
RPAIN-217ENST00000575711 GAKO14976 1311 aa16.94■□□□□ 0.3
RPAIN-217ENST00000575711 TRIM6-TRIM34B2RNG4 842 aa16.93■□□□□ 0.3
RPAIN-217ENST00000575711 POTEIP0CG38 1075 aa16.93■□□□□ 0.3
RPAIN-217ENST00000575711 POTEJP0CG39 1038 aa16.93■□□□□ 0.3
RPAIN-217ENST00000575711 LRRFIP1Q32MZ4 808 aaKnown RBP16.93■□□□□ 0.3
RPAIN-217ENST00000575711 SLC9C2Q5TAH2 1124 aa16.93■□□□□ 0.3
RPAIN-217ENST00000575711 ZSCAN25Q6NSZ9 544 aa16.93■□□□□ 0.3
RPAIN-217ENST00000575711 APOBEC3HQ6NTF7 200 aaKnown RBP16.93■□□□□ 0.3
RPAIN-217ENST00000575711 CNTROBQ8N137 903 aa16.93■□□□□ 0.3
RPAIN-217ENST00000575711 EVI5LQ96CN4 794 aa16.93■□□□□ 0.3
RPAIN-217ENST00000575711 NOL10Q9BSC4 688 aaKnown RBP16.93■□□□□ 0.3
RPAIN-217ENST00000575711 GGA3Q9NZ52 723 aa16.93■□□□□ 0.3
RPAIN-217ENST00000575711 MAST2Q6P0Q8 1798 aa16.92■□□□□ 0.3
RPAIN-217ENST00000575711 TOMM70O94826 608 aa16.92■□□□□ 0.3
RPAIN-217ENST00000575711 PDE6AP16499 860 aa16.92■□□□□ 0.3
RPAIN-217ENST00000575711 CYP7A1P22680 504 aa16.92■□□□□ 0.3
RPAIN-217ENST00000575711 BTDP43251 543 aa16.92■□□□□ 0.3
RPAIN-217ENST00000575711 ANGEL2Q5VTE6 544 aaKnown RBP16.92■□□□□ 0.3
RPAIN-217ENST00000575711 DCPSQ96C86 337 aaKnown RBP16.92■□□□□ 0.3
RPAIN-217ENST00000575711 FSD1Q9BTV5 496 aa16.92■□□□□ 0.3
RPAIN-217ENST00000575711 PGAP2Q9UHJ9 254 aa16.92■□□□□ 0.3
RPAIN-217ENST00000575711 DOCK2Q92608 1830 aa16.91■□□□□ 0.3
RPAIN-217ENST00000575711 GPR75-ASB3A0A0A6YYF3 556 aa16.91■□□□□ 0.3
RPAIN-217ENST00000575711 CLRN2A0PK11 232 aa16.91■□□□□ 0.3
RPAIN-217ENST00000575711 BAG3O95817 575 aa16.91■□□□□ 0.3
RPAIN-217ENST00000575711 ADD2P35612 726 aa16.91■□□□□ 0.3
RPAIN-217ENST00000575711 TTC22Q5TAA0 569 aa16.91■□□□□ 0.3
RPAIN-217ENST00000575711 CHADLQ6NUI6 762 aa16.91■□□□□ 0.3
RPAIN-217ENST00000575711 SMC1BQ8NDV3 1235 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms