RNA–Protein interactions for RNA: ENST00000575701.4

SRRM2-223, Transcript of serine/arginine repetitive matrix 2, human

TSL 3

Gene SRRM2, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRRM2-223	ENST00000575701	ZGPAT	Q8N5A5	531 aa	Known RBP	31.17	■■■□□ 2.58
SRRM2-223	ENST00000575701	TEKT1	Q969V4	418 aa		31.17	■■■□□ 2.58
SRRM2-223	ENST00000575701	PRMT6	Q96LA8	375 aa	Predicted RBP	31.17	■■■□□ 2.58
SRRM2-223	ENST00000575701	GRIK5	Q16478	980 aa		31.16	■■■□□ 2.58
SRRM2-223	ENST00000575701	DLK2	Q6UY11	383 aa		31.16	■■■□□ 2.58
SRRM2-223	ENST00000575701	C2orf69	Q8N8R5	385 aa		31.16	■■■□□ 2.58
SRRM2-223	ENST00000575701	GBA2	Q9HCG7	927 aa	Predicted RBP	31.16	■■■□□ 2.58
SRRM2-223	ENST00000575701	RASGRF1	Q13972	1273 aa		31.15	■■■□□ 2.58
SRRM2-223	ENST00000575701	PCDHAC2	Q9Y5I4	1007 aa		31.15	■■■□□ 2.58
SRRM2-223	ENST00000575701	PPP2R3B	Q9Y5P8	575 aa		31.15	■■■□□ 2.58
SRRM2-223	ENST00000575701	ECE1	P42892	770 aa		31.14	■■■□□ 2.58
SRRM2-223	ENST00000575701	UQCRFS1P1	P0C7P4	283 aa		31.13	■■■□□ 2.57
SRRM2-223	ENST00000575701	ARID4A	P29374	1257 aa	Predicted RBP	31.13	■■■□□ 2.57
SRRM2-223	ENST00000575701	FKBP1B	P68106	108 aa		31.13	■■■□□ 2.57
SRRM2-223	ENST00000575701	HHIPL2	Q6UWX4	724 aa		31.13	■■■□□ 2.57
SRRM2-223	ENST00000575701	EXOC6B	Q9Y2D4	811 aa		31.13	■■■□□ 2.57
SRRM2-223	ENST00000575701	PAPPA2	Q9BXP8	1791 aa		31.12	■■■□□ 2.57
SRRM2-223	ENST00000575701	LDHB	P07195	334 aa	Known RBP	31.12	■■■□□ 2.57
SRRM2-223	ENST00000575701	NF2	P35240	595 aa		31.12	■■■□□ 2.57
SRRM2-223	ENST00000575701	VEGFB	P49765	207 aa		31.12	■■■□□ 2.57
SRRM2-223	ENST00000575701	TNFAIP1	Q13829	316 aa		31.12	■■■□□ 2.57
SRRM2-223	ENST00000575701	SPDYE2	Q495Y8	402 aa		31.12	■■■□□ 2.57
SRRM2-223	ENST00000575701	ZDHHC15	Q96MV8	337 aa		31.12	■■■□□ 2.57
SRRM2-223	ENST00000575701	CLRN2	A0PK11	232 aa		31.11	■■■□□ 2.57
SRRM2-223	ENST00000575701	SIRT2	Q8IXJ6	389 aa		31.11	■■■□□ 2.57
SRRM2-223	ENST00000575701	SCAF8	Q9UPN6	1271 aa	Known RBP	31.11	■■■□□ 2.57
SRRM2-223	ENST00000575701	PRDX5	P30044	214 aa		31.1	■■■□□ 2.57
SRRM2-223	ENST00000575701	HUNK	P57058	714 aa		31.1	■■■□□ 2.57
SRRM2-223	ENST00000575701	CCDC158	Q5M9N0	1113 aa		31.1	■■■□□ 2.57
SRRM2-223	ENST00000575701	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	31.1	■■■□□ 2.57
SRRM2-223	ENST00000575701	DEFB129	Q9H1M3	183 aa		31.1	■■■□□ 2.57
SRRM2-223	ENST00000575701	VEZT	Q9HBM0	779 aa		31.1	■■■□□ 2.57
SRRM2-223	ENST00000575701	WDR33	Q9C0J8	1336 aa	Known RBP	31.09	■■■□□ 2.57
SRRM2-223	ENST00000575701	SPTY2D1	Q68D10	685 aa	Predicted RBP	31.09	■■■□□ 2.57
SRRM2-223	ENST00000575701	CAPNS2	Q96L46	248 aa		31.09	■■■□□ 2.57
SRRM2-223	ENST00000575701	DBNDD2	Q9BQY9	259 aa		31.09	■■■□□ 2.57
SRRM2-223	ENST00000575701	TDRD3	Q9H7E2	651 aa	Known RBP	31.09	■■■□□ 2.57
SRRM2-223	ENST00000575701	ZNF70	Q9UC06	446 aa	Predicted RBP	31.09	■■■□□ 2.57
SRRM2-223	ENST00000575701	THSD7B	Q9C0I4	1608 aa		31.09	■■■□□ 2.57
SRRM2-223	ENST00000575701	SPATA5	Q8NB90	893 aa		31.08	■■■□□ 2.57
SRRM2-223	ENST00000575701	HMG20B	Q9P0W2	317 aa		31.08	■■■□□ 2.57
SRRM2-223	ENST00000575701	AOX1	Q06278	1338 aa		31.07	■■■□□ 2.56
SRRM2-223	ENST00000575701	RAB11FIP3	O75154	756 aa		31.07	■■■□□ 2.56
SRRM2-223	ENST00000575701	TTC39A	Q5SRH9	613 aa		31.07	■■■□□ 2.56
SRRM2-223	ENST00000575701	KIF1BP	Q96EK5	621 aa		31.07	■■■□□ 2.56
SRRM2-223	ENST00000575701	ZNF512B	Q96KM6	892 aa	Predicted RBP	31.07	■■■□□ 2.56
SRRM2-223	ENST00000575701	RHPN1	Q8TCX5	695 aa		31.06	■■■□□ 2.56
SRRM2-223	ENST00000575701	EAF2	Q96CJ1	260 aa	Predicted RBP	31.06	■■■□□ 2.56
SRRM2-223	ENST00000575701	TMOD2	Q9NZR1	351 aa		31.06	■■■□□ 2.56
SRRM2-223	ENST00000575701	ABCF2	Q9UG63	623 aa		31.06	■■■□□ 2.56
SRRM2-223	ENST00000575701	TNNI2	P48788	182 aa		31.05	■■■□□ 2.56
SRRM2-223	ENST00000575701	PRAMEF18	Q5VWM3	479 aa		31.05	■■■□□ 2.56
SRRM2-223	ENST00000575701	CYP4F22	Q6NT55	531 aa		31.05	■■■□□ 2.56
SRRM2-223	ENST00000575701	SLF2	Q8IX21	1173 aa		31.05	■■■□□ 2.56
SRRM2-223	ENST00000575701	DBNL	Q9UJU6	430 aa	Known RBP	31.05	■■■□□ 2.56
SRRM2-223	ENST00000575701	MCAM	P43121	646 aa		31.04	■■■□□ 2.56
SRRM2-223	ENST00000575701	APOBEC3H	Q6NTF7	200 aa	Known RBP	31.04	■■■□□ 2.56
SRRM2-223	ENST00000575701	DZIP1	Q86YF9	867 aa	Known RBP	31.04	■■■□□ 2.56
SRRM2-223	ENST00000575701	RASA3	Q14644	834 aa		31.03	■■■□□ 2.56
SRRM2-223	ENST00000575701	RGMB	Q6NW40	437 aa		31.03	■■■□□ 2.56
SRRM2-223	ENST00000575701	ERICH6	Q7L0X2	663 aa		31.03	■■■□□ 2.56
SRRM2-223	ENST00000575701	CLASRP	Q8N2M8	674 aa	Known RBP	31.03	■■■□□ 2.56
SRRM2-223	ENST00000575701	DAGLA	Q9Y4D2	1042 aa		31.03	■■■□□ 2.56
SRRM2-223	ENST00000575701	DIXDC1	Q155Q3	683 aa		31.02	■■■□□ 2.56
SRRM2-223	ENST00000575701	SUPT20HL1	Q3ZLR7	823 aa		31.02	■■■□□ 2.56
SRRM2-223	ENST00000575701	FKBP1C	Q5VVH2	108 aa		31.02	■■■□□ 2.56
SRRM2-223	ENST00000575701	AACS	Q86V21	672 aa		31.02	■■■□□ 2.56
SRRM2-223	ENST00000575701	CCDC8	Q9H0W5	538 aa	Predicted RBP	31.02	■■■□□ 2.56
SRRM2-223	ENST00000575701	IGSF3	O75054	1194 aa		31	■■■□□ 2.55
SRRM2-223	ENST00000575701	MAP2K2	P36507	400 aa		31	■■■□□ 2.55
SRRM2-223	ENST00000575701	GRM1	Q13255	1194 aa		31	■■■□□ 2.55
SRRM2-223	ENST00000575701	TTLL12	Q14166	644 aa	Predicted RBP	31	■■■□□ 2.55
SRRM2-223	ENST00000575701	PI16	Q6UXB8	463 aa		31	■■■□□ 2.55
SRRM2-223	ENST00000575701	ARMC9	Q7Z3E5	817 aa		31	■■■□□ 2.55
SRRM2-223	ENST00000575701	CCDC102A	Q96A19	550 aa		31	■■■□□ 2.55
SRRM2-223	ENST00000575701	IL1RAPL2	Q9NP60	686 aa		31	■■■□□ 2.55
SRRM2-223	ENST00000575701	TLR7	Q9NYK1	1049 aa	Known RBP	31	■■■□□ 2.55
SRRM2-223	ENST00000575701	GAK	O14976	1311 aa		30.99	■■■□□ 2.55
SRRM2-223	ENST00000575701	AKAP11	Q9UKA4	1901 aa		30.99	■■■□□ 2.55
SRRM2-223	ENST00000575701	MYH2	Q9UKX2	1941 aa		30.99	■■■□□ 2.55
SRRM2-223	ENST00000575701	TCP10L2	B9ZVM9	353 aa		30.99	■■■□□ 2.55
SRRM2-223	ENST00000575701	FAM163A	Q96GL9	167 aa	Predicted RBP	30.99	■■■□□ 2.55
SRRM2-223	ENST00000575701	ZNF157	P51786	506 aa	Predicted RBP	30.98	■■■□□ 2.55
SRRM2-223	ENST00000575701	NOG	Q13253	232 aa		30.98	■■■□□ 2.55
SRRM2-223	ENST00000575701	FAM83A	Q86UY5	434 aa		30.98	■■■□□ 2.55
SRRM2-223	ENST00000575701	SSC5D	A1L4H1	1573 aa		30.97	■■■□□ 2.55
SRRM2-223	ENST00000575701	APBB1	O00213	710 aa		30.97	■■■□□ 2.55
SRRM2-223	ENST00000575701	PPP1R12B	O60237	982 aa	Predicted RBP	30.97	■■■□□ 2.55
SRRM2-223	ENST00000575701	GSTO1	P78417	241 aa		30.97	■■■□□ 2.55
SRRM2-223	ENST00000575701	MAP2K1	Q02750	393 aa	Predicted RBP	30.97	■■■□□ 2.55
SRRM2-223	ENST00000575701	MAST2	Q6P0Q8	1798 aa		30.97	■■■□□ 2.55
SRRM2-223	ENST00000575701	HSPA1A	P0DMV8	641 aa	Known RBP	30.96	■■■□□ 2.55
SRRM2-223	ENST00000575701	HSPA1B	P0DMV9	641 aa	Known RBP	30.96	■■■□□ 2.55
SRRM2-223	ENST00000575701	MECOM	Q03112	1051 aa		30.96	■■■□□ 2.55
SRRM2-223	ENST00000575701	LRP2BP	Q9P2M1	347 aa		30.96	■■■□□ 2.55
SRRM2-223	ENST00000575701	MROH7-TTC4	A0A0A0MT08	1334 aa		30.96	■■■□□ 2.55
SRRM2-223	ENST00000575701	RPAP1	Q9BWH6	1393 aa	Predicted RBP	30.95	■■■□□ 2.55
SRRM2-223	ENST00000575701	IFIT2	P09913	472 aa	Known RBP	30.95	■■■□□ 2.55
SRRM2-223	ENST00000575701	MAP3K11	Q16584	847 aa		30.95	■■■□□ 2.55
SRRM2-223	ENST00000575701	NBPF12	Q5TAG4	269 aa	Predicted RBP	30.95	■■■□□ 2.55

Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms