RNA–Protein interactions for RNA: ENST00000575643.1

PSMB6-204, Transcript of proteasome subunit beta 6, humanhuman

TSL 2

Gene PSMB6, Length 666 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB6-204ENST00000575643 MAP3K11Q16584 847 aa16.55■□□□□ 0.24
PSMB6-204ENST00000575643 SPRYD7Q5W111 196 aa16.55■□□□□ 0.24
PSMB6-204ENST00000575643 TCP10L2B9ZVM9 353 aa16.54■□□□□ 0.24
PSMB6-204ENST00000575643 TBC1D8O95759 1140 aa16.54■□□□□ 0.24
PSMB6-204ENST00000575643 IFIT1P09914 478 aaKnown RBP16.54■□□□□ 0.24
PSMB6-204ENST00000575643 SLC5A1P13866 664 aa16.54■□□□□ 0.24
PSMB6-204ENST00000575643 TEPSINQ96N21 525 aa16.54■□□□□ 0.24
PSMB6-204ENST00000575643 TMEM39BQ9GZU3 492 aa16.54■□□□□ 0.24
PSMB6-204ENST00000575643 GJA5P36382 358 aa16.53■□□□□ 0.24
PSMB6-204ENST00000575643 REM2Q8IYK8 340 aaPredicted RBP16.53■□□□□ 0.24
PSMB6-204ENST00000575643 TBC1D22AQ8WUA7 517 aa16.53■□□□□ 0.24
PSMB6-204ENST00000575643 LPIN2Q92539 896 aa16.53■□□□□ 0.24
PSMB6-204ENST00000575643 WNK4Q96J92 1243 aa16.53■□□□□ 0.24
PSMB6-204ENST00000575643 PPP1R12BO60237 982 aaPredicted RBP16.52■□□□□ 0.24
PSMB6-204ENST00000575643 BCAR3O75815 825 aa16.52■□□□□ 0.24
PSMB6-204ENST00000575643 CIAO1O76071 339 aa16.52■□□□□ 0.24
PSMB6-204ENST00000575643 TRIM27P14373 513 aa16.52■□□□□ 0.24
PSMB6-204ENST00000575643 TM4SF4P48230 202 aa16.52■□□□□ 0.24
PSMB6-204ENST00000575643 SREBF2Q12772 1141 aa16.52■□□□□ 0.24
PSMB6-204ENST00000575643 TNFAIP1Q13829 316 aa16.52■□□□□ 0.24
PSMB6-204ENST00000575643 ATP2B3Q16720 1220 aa16.52■□□□□ 0.24
PSMB6-204ENST00000575643 R3HDMLQ9H3Y0 253 aa16.52■□□□□ 0.24
PSMB6-204ENST00000575643 DOCK2Q92608 1830 aa16.52■□□□□ 0.23
PSMB6-204ENST00000575643 USP2O75604 605 aaPredicted RBP16.51■□□□□ 0.23
PSMB6-204ENST00000575643 SUPT20HL1Q3ZLR7 823 aa16.51■□□□□ 0.23
PSMB6-204ENST00000575643 INTS3Q68E01 1043 aaKnown RBP16.51■□□□□ 0.23
PSMB6-204ENST00000575643 MIER1Q8N108 512 aa16.51■□□□□ 0.23
PSMB6-204ENST00000575643 ZNF296Q8WUU4 475 aaPredicted RBP16.51■□□□□ 0.23
PSMB6-204ENST00000575643 TEKT1Q969V4 418 aa16.51■□□□□ 0.23
PSMB6-204ENST00000575643 HTTP42858 3142 aa16.51■□□□□ 0.23
PSMB6-204ENST00000575643 MYH2Q9UKX2 1941 aa16.51■□□□□ 0.23
PSMB6-204ENST00000575643 IGF2BP3O00425 579 aaKnown RBP eCLIP16.5■□□□□ 0.23
PSMB6-204ENST00000575643 PRDX5P30044 214 aa16.5■□□□□ 0.23
PSMB6-204ENST00000575643 ADORA1P30542 326 aa16.5■□□□□ 0.23
PSMB6-204ENST00000575643 PHKA1P46020 1223 aa16.5■□□□□ 0.23
PSMB6-204ENST00000575643 IREB2P48200 963 aaKnown RBP16.5■□□□□ 0.23
PSMB6-204ENST00000575643 ZDHHC15Q96MV8 337 aa16.5■□□□□ 0.23
PSMB6-204ENST00000575643 MAST3O60307 1309 aa16.49■□□□□ 0.23
PSMB6-204ENST00000575643 ZBTB48P10074 688 aaPredicted RBP16.49■□□□□ 0.23
PSMB6-204ENST00000575643 HDLBPQ00341 1268 aaKnown RBP16.49■□□□□ 0.23
PSMB6-204ENST00000575643 APOBEC3HQ6NTF7 200 aaKnown RBP16.49■□□□□ 0.23
PSMB6-204ENST00000575643 CTU1Q7Z7A3 348 aaKnown RBP16.49■□□□□ 0.23
PSMB6-204ENST00000575643 CNKSR2Q8WXI2 1034 aa16.49■□□□□ 0.23
PSMB6-204ENST00000575643 ARHGAP45Q92619 1136 aa16.49■□□□□ 0.23
PSMB6-204ENST00000575643 FRAT1Q92837 279 aaPredicted RBP16.49■□□□□ 0.23
PSMB6-204ENST00000575643 CLUAP1Q96AJ1 413 aa16.49■□□□□ 0.23
PSMB6-204ENST00000575643 SLC10A4Q96EP9 437 aa16.49■□□□□ 0.23
PSMB6-204ENST00000575643 ELP3Q9H9T3 547 aa16.49■□□□□ 0.23
PSMB6-204ENST00000575643 FBXO3Q9UK99 471 aa16.49■□□□□ 0.23
PSMB6-204ENST00000575643 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.49■□□□□ 0.23
PSMB6-204ENST00000575643 GPR25O00155 361 aa16.48■□□□□ 0.23
PSMB6-204ENST00000575643 IL15P40933 162 aaPredicted RBP16.48■□□□□ 0.23
PSMB6-204ENST00000575643 HNRNPUQ00839 825 aaKnown RBP eCLIP16.48■□□□□ 0.23
PSMB6-204ENST00000575643 VGLL4Q14135 290 aa16.48■□□□□ 0.23
PSMB6-204ENST00000575643 DIXDC1Q155Q3 683 aa16.48■□□□□ 0.23
PSMB6-204ENST00000575643 COPRSQ9NQ92 184 aa16.48■□□□□ 0.23
PSMB6-204ENST00000575643 CEP126Q9P2H0 1117 aa16.48■□□□□ 0.23
PSMB6-204ENST00000575643 RPAP1Q9BWH6 1393 aaPredicted RBP16.48■□□□□ 0.23
PSMB6-204ENST00000575643 TNRC18O15417 2968 aaPredicted RBP16.47■□□□□ 0.23
PSMB6-204ENST00000575643 MANSC4A6NHS7 340 aaPredicted RBP16.47■□□□□ 0.23
PSMB6-204ENST00000575643 SRGAP3O43295 1099 aa16.47■□□□□ 0.23
PSMB6-204ENST00000575643 ATF7IPQ6VMQ6 1270 aa16.47■□□□□ 0.23
PSMB6-204ENST00000575643 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.47■□□□□ 0.23
PSMB6-204ENST00000575643 IFNL1Q8IU54 200 aa16.47■□□□□ 0.23
PSMB6-204ENST00000575643 ANKRD13AQ8IZ07 590 aa16.47■□□□□ 0.23
PSMB6-204ENST00000575643 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.47■□□□□ 0.235e-7■■■■■ 31.7
PSMB6-204ENST00000575643 OPTNQ96CV9 577 aa16.47■□□□□ 0.23
PSMB6-204ENST00000575643 CFHR5Q9BXR6 569 aa16.47■□□□□ 0.23
PSMB6-204ENST00000575643 SUGT1Q9Y2Z0 365 aa16.47■□□□□ 0.23
PSMB6-204ENST00000575643 DAGLAQ9Y4D2 1042 aa16.47■□□□□ 0.23
PSMB6-204ENST00000575643 ZSWIM8A7E2V4 1837 aa16.47■□□□□ 0.23
PSMB6-204ENST00000575643 MAST2Q6P0Q8 1798 aa16.46■□□□□ 0.23
PSMB6-204ENST00000575643 GNAI3P08754 354 aa16.46■□□□□ 0.23
PSMB6-204ENST00000575643 TNNI2P48788 182 aa16.46■□□□□ 0.23
PSMB6-204ENST00000575643 MTX1Q13505 466 aa16.46■□□□□ 0.23
PSMB6-204ENST00000575643 WDR66Q8TBY9 1149 aa16.46■□□□□ 0.23
PSMB6-204ENST00000575643 AK9Q5TCS8 1911 aa16.46■□□□□ 0.23
PSMB6-204ENST00000575643 SOX10P56693 466 aa16.45■□□□□ 0.22
PSMB6-204ENST00000575643 TFCP2Q12800 502 aa16.45■□□□□ 0.22
PSMB6-204ENST00000575643 RASGRF1Q13972 1273 aa16.45■□□□□ 0.22
PSMB6-204ENST00000575643 DIEXFQ68CQ4 756 aaKnown RBP16.45■□□□□ 0.22
PSMB6-204ENST00000575643 CCDC102BQ68D86 513 aa16.45■□□□□ 0.22
PSMB6-204ENST00000575643 HHIPL2Q6UWX4 724 aa16.45■□□□□ 0.22
PSMB6-204ENST00000575643 TMOD2Q9NZR1 351 aa16.45■□□□□ 0.22
PSMB6-204ENST00000575643 RFX7Q2KHR2 1363 aa16.45■□□□□ 0.22
PSMB6-204ENST00000575643 SALL1Q9NSC2 1324 aa16.45■□□□□ 0.22
PSMB6-204ENST00000575643 PNMA6EA0A0J9YXQ4 647 aa16.44■□□□□ 0.22
PSMB6-204ENST00000575643 UNCXA6NJT0 531 aa16.44■□□□□ 0.22
PSMB6-204ENST00000575643 NOM1Q5C9Z4 860 aaKnown RBP16.44■□□□□ 0.22
PSMB6-204ENST00000575643 TMEM57Q8N5G2 664 aa16.44■□□□□ 0.22
PSMB6-204ENST00000575643 PTPN18Q99952 460 aa16.44■□□□□ 0.22
PSMB6-204ENST00000575643 HPS5Q9UPZ3 1129 aa16.44■□□□□ 0.22
PSMB6-204ENST00000575643 HDAC5Q9UQL6 1122 aa16.44■□□□□ 0.22
PSMB6-204ENST00000575643 SNCAIPQ9Y6H5 919 aa16.44■□□□□ 0.22
PSMB6-204ENST00000575643 A0A1B0GUL7 405 aa16.43■□□□□ 0.22
PSMB6-204ENST00000575643 IPO8O15397 1037 aaKnown RBP16.43■□□□□ 0.22
PSMB6-204ENST00000575643 NFIAQ12857 509 aa16.43■□□□□ 0.22
PSMB6-204ENST00000575643 CDC42EP5Q6NZY7 148 aa16.43■□□□□ 0.22
PSMB6-204ENST00000575643 FAM83AQ86UY5 434 aa16.43■□□□□ 0.22
PSMB6-204ENST00000575643 OTUD5Q96G74 571 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 303 ms