RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 H0YGN5 161 aa11.42□□□□□ -0.58
SMG6-218ENST00000575454 HIBADHP31937 336 aaKnown RBP11.42□□□□□ -0.58
SMG6-218ENST00000575454 FOXO4P98177 505 aa11.42□□□□□ -0.58
SMG6-218ENST00000575454 HDLBPQ00341 1268 aaKnown RBP11.42□□□□□ -0.58
SMG6-218ENST00000575454 SNAPC2Q13487 334 aa11.42□□□□□ -0.58
SMG6-218ENST00000575454 UBE4AQ14139 1066 aa11.42□□□□□ -0.58
SMG6-218ENST00000575454 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.42□□□□□ -0.58
SMG6-218ENST00000575454 TDRD7Q8NHU6 1098 aaKnown RBP11.42□□□□□ -0.58
SMG6-218ENST00000575454 OTUD5Q96G74 571 aa11.42□□□□□ -0.58
SMG6-218ENST00000575454 TEPSINQ96N21 525 aa11.42□□□□□ -0.58
SMG6-218ENST00000575454 TDRD3Q9H7E2 651 aaKnown RBP11.42□□□□□ -0.58
SMG6-218ENST00000575454 JAG2Q9Y219 1238 aa11.42□□□□□ -0.58
SMG6-218ENST00000575454 SPDYE5A6NIY4 337 aa11.41□□□□□ -0.58
SMG6-218ENST00000575454 TCP10L2B9ZVM9 353 aa11.41□□□□□ -0.58
SMG6-218ENST00000575454 PLIN1O60240 522 aa11.41□□□□□ -0.58
SMG6-218ENST00000575454 HOXD10P28358 340 aa11.41□□□□□ -0.58
SMG6-218ENST00000575454 LACTBP83111 547 aaPredicted RBP11.41□□□□□ -0.58
SMG6-218ENST00000575454 NCBP3Q53F19 620 aaKnown RBP11.41□□□□□ -0.58
SMG6-218ENST00000575454 LMBR1LQ6UX01 489 aa11.41□□□□□ -0.58
SMG6-218ENST00000575454 ERO1BQ86YB8 467 aa11.41□□□□□ -0.58
SMG6-218ENST00000575454 FAM43AQ8N2R8 423 aa11.41□□□□□ -0.58
SMG6-218ENST00000575454 TBC1D22AQ8WUA7 517 aa11.41□□□□□ -0.58
SMG6-218ENST00000575454 TMEM39BQ9GZU3 492 aa11.41□□□□□ -0.58
SMG6-218ENST00000575454 AOX1Q06278 1338 aa11.4□□□□□ -0.58
SMG6-218ENST00000575454 POLR2AP24928 1970 aaKnown RBP11.4□□□□□ -0.58
SMG6-218ENST00000575454 CRKP46108 304 aa11.4□□□□□ -0.58
SMG6-218ENST00000575454 CAP1Q01518 475 aa11.4□□□□□ -0.58
SMG6-218ENST00000575454 FKBP1CQ5VVH2 108 aa11.4□□□□□ -0.58
SMG6-218ENST00000575454 VPS37DQ86XT2 251 aa11.4□□□□□ -0.58
SMG6-218ENST00000575454 WWC1Q8IX03 1113 aa11.4□□□□□ -0.58
SMG6-218ENST00000575454 CNKSR2Q8WXI2 1034 aa11.4□□□□□ -0.58
SMG6-218ENST00000575454 DPF3Q92784 378 aa11.4□□□□□ -0.58
SMG6-218ENST00000575454 MRIQ9BWK5 157 aa11.4□□□□□ -0.58
SMG6-218ENST00000575454 TMOD2Q9NZR1 351 aa11.4□□□□□ -0.58
SMG6-218ENST00000575454 PPIL2Q13356 520 aa11.39□□□□□ -0.59
SMG6-218ENST00000575454 BEND3Q5T5X7 828 aa11.39□□□□□ -0.59
SMG6-218ENST00000575454 DCAF15Q66K64 600 aa11.39□□□□□ -0.59
SMG6-218ENST00000575454 FAM83AQ86UY5 434 aa11.39□□□□□ -0.59
SMG6-218ENST00000575454 SH3TC2Q8TF17 1288 aa11.39□□□□□ -0.59
SMG6-218ENST00000575454 FAM84BQ96KN1 310 aaPredicted RBP11.39□□□□□ -0.59
SMG6-218ENST00000575454 HTATIP2Q9BUP3 242 aa11.39□□□□□ -0.59
SMG6-218ENST00000575454 KIAA0100Q14667 2235 aaKnown RBP11.39□□□□□ -0.59
SMG6-218ENST00000575454 BTBD19C9JJ37 291 aa11.38□□□□□ -0.59
SMG6-218ENST00000575454 GRM8O00222 908 aa11.38□□□□□ -0.59
SMG6-218ENST00000575454 IRF6O14896 467 aa11.38□□□□□ -0.59
SMG6-218ENST00000575454 FRAT2O75474 233 aaPredicted RBP11.38□□□□□ -0.59
SMG6-218ENST00000575454 MYCP01106 439 aaPredicted RBP11.38□□□□□ -0.59
SMG6-218ENST00000575454 CAPN2P17655 700 aa11.38□□□□□ -0.59
SMG6-218ENST00000575454 GYG1P46976 350 aa11.38□□□□□ -0.59
SMG6-218ENST00000575454 PPATQ06203 517 aa11.38□□□□□ -0.59
SMG6-218ENST00000575454 CAVIN4Q5BKX8 364 aa11.38□□□□□ -0.59
SMG6-218ENST00000575454 CHRDL2Q6WN34 429 aa11.38□□□□□ -0.59
SMG6-218ENST00000575454 RAET1EQ8TD07 263 aa11.38□□□□□ -0.59
SMG6-218ENST00000575454 TEKT1Q969V4 418 aa11.38□□□□□ -0.59
SMG6-218ENST00000575454 WRNIP1Q96S55 665 aa11.38□□□□□ -0.59
SMG6-218ENST00000575454 C9orf78Q9NZ63 289 aaPredicted RBP11.38□□□□□ -0.59
SMG6-218ENST00000575454 SUGT1Q9Y2Z0 365 aa11.38□□□□□ -0.59
SMG6-218ENST00000575454 NR2E3Q9Y5X4 410 aa11.38□□□□□ -0.59
SMG6-218ENST00000575454 MROH5Q6ZUA9 1318 aa11.37□□□□□ -0.59
SMG6-218ENST00000575454 FMNL1O95466 1100 aaPredicted RBP11.37□□□□□ -0.59
SMG6-218ENST00000575454 C17orf99Q6UX52 265 aa11.37□□□□□ -0.59
SMG6-218ENST00000575454 ANKRD23Q86SG2 305 aa11.37□□□□□ -0.59
SMG6-218ENST00000575454 CDAN1Q8IWY9 1227 aa11.37□□□□□ -0.59
SMG6-218ENST00000575454 ZNF594Q96JF6 807 aaPredicted RBP11.37□□□□□ -0.59
SMG6-218ENST00000575454 TRIM47Q96LD4 638 aa11.37□□□□□ -0.59
SMG6-218ENST00000575454 ZDHHC15Q96MV8 337 aa11.37□□□□□ -0.59
SMG6-218ENST00000575454 SRRDQ9UH36 339 aa11.37□□□□□ -0.59
SMG6-218ENST00000575454 SNCAIPQ9Y6H5 919 aa11.37□□□□□ -0.59
SMG6-218ENST00000575454 LAMA3Q16787 3333 aa11.37□□□□□ -0.59
SMG6-218ENST00000575454 MAST3O60307 1309 aa11.36□□□□□ -0.59
SMG6-218ENST00000575454 VAMP4O75379 141 aa11.36□□□□□ -0.59
SMG6-218ENST00000575454 ALDH1L1O75891 902 aa11.36□□□□□ -0.59
SMG6-218ENST00000575454 GJB1P08034 283 aa11.36□□□□□ -0.59
SMG6-218ENST00000575454 GRK4P32298 578 aa11.36□□□□□ -0.59
SMG6-218ENST00000575454 PSMC4P43686 418 aa11.36□□□□□ -0.59
SMG6-218ENST00000575454 GJA8P48165 433 aa11.36□□□□□ -0.59
SMG6-218ENST00000575454 UBXN2AP68543 259 aa11.36□□□□□ -0.59
SMG6-218ENST00000575454 FBXO33Q7Z6M2 555 aa11.36□□□□□ -0.59
SMG6-218ENST00000575454 ZKSCAN4Q969J2 545 aaPredicted RBP11.36□□□□□ -0.59
SMG6-218ENST00000575454 ZNF341Q9BYN7 854 aa11.36□□□□□ -0.59
SMG6-218ENST00000575454 ARHGAP39Q9C0H5 1083 aa11.36□□□□□ -0.59
SMG6-218ENST00000575454 PSME4Q14997 1843 aa11.35□□□□□ -0.59
SMG6-218ENST00000575454 A0A1W2PPC1 479 aa11.35□□□□□ -0.59
SMG6-218ENST00000575454 F6X3S4 739 aa11.35□□□□□ -0.59
SMG6-218ENST00000575454 CHAF1AQ13111 956 aaPredicted RBP11.35□□□□□ -0.59
SMG6-218ENST00000575454 EPHA10Q5JZY3 1008 aa11.35□□□□□ -0.59
SMG6-218ENST00000575454 WDR63Q8IWG1 891 aa11.35□□□□□ -0.59
SMG6-218ENST00000575454 SRCIN1Q9C0H9 1055 aa11.35□□□□□ -0.59
SMG6-218ENST00000575454 RBM27Q9P2N5 1060 aaKnown RBP11.35□□□□□ -0.59
SMG6-218ENST00000575454 BIN2Q9UBW5 565 aaPredicted RBP11.35□□□□□ -0.59
SMG6-218ENST00000575454 RIPOR2Q9Y4F9 1068 aa11.35□□□□□ -0.59
SMG6-218ENST00000575454 FANCIQ9NVI1 1328 aa11.35□□□□□ -0.59
SMG6-218ENST00000575454 UNC80Q8N2C7 3258 aa11.34□□□□□ -0.59
SMG6-218ENST00000575454 PDHXO00330 501 aa11.34□□□□□ -0.59
SMG6-218ENST00000575454 OSBPP22059 807 aa11.34□□□□□ -0.59
SMG6-218ENST00000575454 MTFR1Q15390 333 aa11.34□□□□□ -0.59
SMG6-218ENST00000575454 APOBEC3HQ6NTF7 200 aaKnown RBP11.34□□□□□ -0.59
SMG6-218ENST00000575454 HHIPL2Q6UWX4 724 aa11.34□□□□□ -0.59
SMG6-218ENST00000575454 PARK7Q99497 189 aaKnown RBP11.34□□□□□ -0.59
SMG6-218ENST00000575454 RNF208Q9H0X6 261 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms