RNA–Protein interactions for RNA: ENST00000575214.1

HCFC1R1-208, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2

Gene HCFC1R1, Length 1,365 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-208ENST00000575214 SIRT2Q8IXJ6 389 aa25.49■■□□□ 1.67
HCFC1R1-208ENST00000575214 TEKT1Q969V4 418 aa25.49■■□□□ 1.67
HCFC1R1-208ENST00000575214 ZBTB22O15209 634 aa25.48■■□□□ 1.67
HCFC1R1-208ENST00000575214 HDLBPQ00341 1268 aaKnown RBP25.48■■□□□ 1.67
HCFC1R1-208ENST00000575214 VEZTQ9HBM0 779 aa25.48■■□□□ 1.67
HCFC1R1-208ENST00000575214 GBA2Q9HCG7 927 aaPredicted RBP25.48■■□□□ 1.67
HCFC1R1-208ENST00000575214 AOX1Q06278 1338 aa25.47■■□□□ 1.67
HCFC1R1-208ENST00000575214 SALL1Q9NSC2 1324 aa25.47■■□□□ 1.67
HCFC1R1-208ENST00000575214 PRAMEF18Q5VWM3 479 aa25.47■■□□□ 1.67
HCFC1R1-208ENST00000575214 SAPCD2Q86UD0 394 aa25.47■■□□□ 1.67
HCFC1R1-208ENST00000575214 C2orf69Q8N8R5 385 aa25.47■■□□□ 1.67
HCFC1R1-208ENST00000575214 LDHBP07195 334 aaKnown RBP25.46■■□□□ 1.67
HCFC1R1-208ENST00000575214 PRDX5P30044 214 aa25.46■■□□□ 1.67
HCFC1R1-208ENST00000575214 ZGPATQ8N5A5 531 aaKnown RBP25.46■■□□□ 1.67
HCFC1R1-208ENST00000575214 JMYQ8N9B5 988 aa25.46■■□□□ 1.67
HCFC1R1-208ENST00000575214 DBNDD2Q9BQY9 259 aa25.46■■□□□ 1.67
HCFC1R1-208ENST00000575214 PDS5AQ29RF7 1337 aaKnown RBP25.46■■□□□ 1.67
HCFC1R1-208ENST00000575214 VEGFBP49765 207 aa25.45■■□□□ 1.67
HCFC1R1-208ENST00000575214 TDRD3Q9H7E2 651 aaKnown RBP25.45■■□□□ 1.67
HCFC1R1-208ENST00000575214 PCNTO95613 3336 aa25.45■■□□□ 1.66
HCFC1R1-208ENST00000575214 APBB1O00213 710 aa25.44■■□□□ 1.66
HCFC1R1-208ENST00000575214 UQCRFS1P1P0C7P4 283 aa25.44■■□□□ 1.66
HCFC1R1-208ENST00000575214 ARID4AP29374 1257 aaPredicted RBP25.44■■□□□ 1.66
HCFC1R1-208ENST00000575214 HUNKP57058 714 aa25.44■■□□□ 1.66
HCFC1R1-208ENST00000575214 CCDC158Q5M9N0 1113 aa25.44■■□□□ 1.66
HCFC1R1-208ENST00000575214 TTC39AQ5SRH9 613 aa25.44■■□□□ 1.66
HCFC1R1-208ENST00000575214 MRIQ9BWK5 157 aa25.44■■□□□ 1.66
HCFC1R1-208ENST00000575214 ZNF70Q9UC06 446 aaPredicted RBP25.44■■□□□ 1.66
HCFC1R1-208ENST00000575214 ABCF2Q9UG63 623 aa25.44■■□□□ 1.66
HCFC1R1-208ENST00000575214 GRM1Q13255 1194 aa25.44■■□□□ 1.66
HCFC1R1-208ENST00000575214 SPDYE2Q495Y8 402 aa25.44■■□□□ 1.66
HCFC1R1-208ENST00000575214 EAF2Q96CJ1 260 aaPredicted RBP25.44■■□□□ 1.66
HCFC1R1-208ENST00000575214 ZDHHC15Q96MV8 337 aa25.44■■□□□ 1.66
HCFC1R1-208ENST00000575214 CCDC8Q9H0W5 538 aaPredicted RBP25.44■■□□□ 1.66
HCFC1R1-208ENST00000575214 DEFB129Q9H1M3 183 aa25.44■■□□□ 1.66
HCFC1R1-208ENST00000575214 HMG20BQ9P0W2 317 aa25.44■■□□□ 1.66
HCFC1R1-208ENST00000575214 NF2P35240 595 aa25.43■■□□□ 1.66
HCFC1R1-208ENST00000575214 CYP4F22Q6NT55 531 aa25.43■■□□□ 1.66
HCFC1R1-208ENST00000575214 HHIPL2Q6UWX4 724 aa25.43■■□□□ 1.66
HCFC1R1-208ENST00000575214 PI16Q6UXB8 463 aa25.43■■□□□ 1.66
HCFC1R1-208ENST00000575214 SPATA5Q8NB90 893 aa25.43■■□□□ 1.66
HCFC1R1-208ENST00000575214 RHPN1Q8TCX5 695 aa25.43■■□□□ 1.66
HCFC1R1-208ENST00000575214 DBNLQ9UJU6 430 aaKnown RBP25.43■■□□□ 1.66
HCFC1R1-208ENST00000575214 ECE1P42892 770 aa25.42■■□□□ 1.66
HCFC1R1-208ENST00000575214 MCAMP43121 646 aa25.42■■□□□ 1.66
HCFC1R1-208ENST00000575214 TNFAIP1Q13829 316 aa25.42■■□□□ 1.66
HCFC1R1-208ENST00000575214 DIXDC1Q155Q3 683 aa25.42■■□□□ 1.66
HCFC1R1-208ENST00000575214 AACSQ86V21 672 aa25.42■■□□□ 1.66
HCFC1R1-208ENST00000575214 KIF1BPQ96EK5 621 aa25.42■■□□□ 1.66
HCFC1R1-208ENST00000575214 CAPNS2Q96L46 248 aa25.42■■□□□ 1.66
HCFC1R1-208ENST00000575214 IL1RAPL2Q9NP60 686 aa25.42■■□□□ 1.66
HCFC1R1-208ENST00000575214 TLR7Q9NYK1 1049 aaKnown RBP25.42■■□□□ 1.66
HCFC1R1-208ENST00000575214 PPP2R3BQ9Y5P8 575 aa25.42■■□□□ 1.66
HCFC1R1-208ENST00000575214 ECM29Q5VYK3 1845 aa25.41■■□□□ 1.66
HCFC1R1-208ENST00000575214 WDR33Q9C0J8 1336 aaKnown RBP25.41■■□□□ 1.66
HCFC1R1-208ENST00000575214 SPTY2D1Q68D10 685 aaPredicted RBP25.41■■□□□ 1.66
HCFC1R1-208ENST00000575214 DZIP1Q86YF9 867 aaKnown RBP25.41■■□□□ 1.66
HCFC1R1-208ENST00000575214 HHIPL1Q96JK4 782 aa25.41■■□□□ 1.66
HCFC1R1-208ENST00000575214 RAB11FIP3O75154 756 aa25.4■■□□□ 1.66
HCFC1R1-208ENST00000575214 TTLL12Q14166 644 aaPredicted RBP25.4■■□□□ 1.66
HCFC1R1-208ENST00000575214 APOBEC3HQ6NTF7 200 aaKnown RBP25.4■■□□□ 1.66
HCFC1R1-208ENST00000575214 CRBNQ96SW2 442 aa25.4■■□□□ 1.66
HCFC1R1-208ENST00000575214 BCL11AQ9H165 835 aa25.4■■□□□ 1.66
HCFC1R1-208ENST00000575214 TMOD2Q9NZR1 351 aa25.4■■□□□ 1.66
HCFC1R1-208ENST00000575214 TCP10L2B9ZVM9 353 aa25.39■■□□□ 1.65
HCFC1R1-208ENST00000575214 FKBP1BP68106 108 aa25.39■■□□□ 1.65
HCFC1R1-208ENST00000575214 RASA3Q14644 834 aa25.39■■□□□ 1.65
HCFC1R1-208ENST00000575214 ERICH6Q7L0X2 663 aa25.39■■□□□ 1.65
HCFC1R1-208ENST00000575214 DAGLAQ9Y4D2 1042 aa25.39■■□□□ 1.65
HCFC1R1-208ENST00000575214 CLASRPQ8N2M8 674 aaKnown RBP25.38■■□□□ 1.65
HCFC1R1-208ENST00000575214 SNRKQ9NRH2 765 aa25.38■■□□□ 1.65
HCFC1R1-208ENST00000575214 PAPPA2Q9BXP8 1791 aa25.37■■□□□ 1.65
HCFC1R1-208ENST00000575214 TNNI2P48788 182 aa25.37■■□□□ 1.65
HCFC1R1-208ENST00000575214 CACNB3P54284 484 aa25.37■■□□□ 1.65
HCFC1R1-208ENST00000575214 TBC1D9Q6ZT07 1266 aa25.37■■□□□ 1.65
HCFC1R1-208ENST00000575214 PRKG1Q13976 671 aa25.36■■□□□ 1.65
HCFC1R1-208ENST00000575214 RGMBQ6NW40 437 aa25.36■■□□□ 1.65
HCFC1R1-208ENST00000575214 MOB2Q70IA6 237 aa25.36■■□□□ 1.65
HCFC1R1-208ENST00000575214 SLF2Q8IX21 1173 aa25.36■■□□□ 1.65
HCFC1R1-208ENST00000575214 ZNF512BQ96KM6 892 aaPredicted RBP25.36■■□□□ 1.65
HCFC1R1-208ENST00000575214 UBE2Q2LH0YL09 131 aa25.34■■□□□ 1.65
HCFC1R1-208ENST00000575214 IFIT2P09913 472 aaKnown RBP25.34■■□□□ 1.65
HCFC1R1-208ENST00000575214 ZNF157P51786 506 aaPredicted RBP25.34■■□□□ 1.65
HCFC1R1-208ENST00000575214 MECOMQ03112 1051 aa25.34■■□□□ 1.65
HCFC1R1-208ENST00000575214 SUPT20HL1Q3ZLR7 823 aa25.34■■□□□ 1.65
HCFC1R1-208ENST00000575214 ARMC9Q7Z3E5 817 aa25.34■■□□□ 1.65
HCFC1R1-208ENST00000575214 RAI14Q9P0K7 980 aa25.34■■□□□ 1.65
HCFC1R1-208ENST00000575214 LRP2BPQ9P2M1 347 aa25.34■■□□□ 1.65
HCFC1R1-208ENST00000575214 NBPF12Q5TAG4 269 aaPredicted RBP25.33■■□□□ 1.65
HCFC1R1-208ENST00000575214 PCDHB15Q9Y5E8 787 aa25.33■■□□□ 1.65
HCFC1R1-208ENST00000575214 AOC2O75106 756 aa25.32■■□□□ 1.64
HCFC1R1-208ENST00000575214 ZAP70P43403 619 aa25.32■■□□□ 1.64
HCFC1R1-208ENST00000575214 CDC42EP5Q6NZY7 148 aa25.32■■□□□ 1.64
HCFC1R1-208ENST00000575214 LRRCC1Q9C099 1032 aa25.32■■□□□ 1.64
HCFC1R1-208ENST00000575214 TMEM39BQ9GZU3 492 aa25.32■■□□□ 1.64
HCFC1R1-208ENST00000575214 ANGEL1Q9UNK9 670 aaKnown RBP25.32■■□□□ 1.64
HCFC1R1-208ENST00000575214 GAKO14976 1311 aa25.32■■□□□ 1.64
HCFC1R1-208ENST00000575214 PPP1R12BO60237 982 aaPredicted RBP25.31■■□□□ 1.64
HCFC1R1-208ENST00000575214 HSPA1AP0DMV8 641 aaKnown RBP25.31■■□□□ 1.64
HCFC1R1-208ENST00000575214 HSPA1BP0DMV9 641 aaKnown RBP25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms