RNA–Protein interactions for RNA: ENST00000575112.5

RPAIN-215, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 3,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-215ENST00000575112 ZNF396Q96N95 335 aaPredicted RBP9.87□□□□□ -0.83
RPAIN-215ENST00000575112 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.87□□□□□ -0.83
RPAIN-215ENST00000575112 KCNJ14Q9UNX9 436 aa9.87□□□□□ -0.83
RPAIN-215ENST00000575112 ATP1A3P13637 1013 aa9.87□□□□□ -0.83
RPAIN-215ENST00000575112 KRT222Q8N1A0 295 aa9.87□□□□□ -0.83
RPAIN-215ENST00000575112 PIGBQ92521 554 aa9.87□□□□□ -0.83
RPAIN-215ENST00000575112 ALG1Q9BT22 464 aa9.87□□□□□ -0.83
RPAIN-215ENST00000575112 ELP1O95163 1332 aa9.87□□□□□ -0.83
RPAIN-215ENST00000575112 GOLGA8AA7E2F4 631 aa9.87□□□□□ -0.83
RPAIN-215ENST00000575112 MBD4O95243 580 aa9.87□□□□□ -0.83
RPAIN-215ENST00000575112 BCAMP50895 628 aa9.87□□□□□ -0.83
RPAIN-215ENST00000575112 CERS3Q8IU89 383 aa9.87□□□□□ -0.83
RPAIN-215ENST00000575112 PXDNQ92626 1479 aa9.87□□□□□ -0.83
RPAIN-215ENST00000575112 METAP2P50579 478 aaKnown RBP eCLIP9.86□□□□□ -0.83
RPAIN-215ENST00000575112 CLCN6P51797 869 aa9.86□□□□□ -0.83
RPAIN-215ENST00000575112 ST5P78524 1137 aa9.86□□□□□ -0.83
RPAIN-215ENST00000575112 DDX19AQ9NUU7 478 aaKnown RBP9.86□□□□□ -0.83
RPAIN-215ENST00000575112 TFCP2L1Q9NZI6 479 aa9.86□□□□□ -0.83
RPAIN-215ENST00000575112 TPM3P06753 285 aa9.86□□□□□ -0.83
RPAIN-215ENST00000575112 ATP2B2Q01814 1243 aa9.86□□□□□ -0.83
RPAIN-215ENST00000575112 LRRFIP1Q32MZ4 808 aaKnown RBP9.86□□□□□ -0.83
RPAIN-215ENST00000575112 TMC6Q7Z403 805 aa9.86□□□□□ -0.83
RPAIN-215ENST00000575112 ZNF397Q8NF99 534 aaPredicted RBP9.86□□□□□ -0.83
RPAIN-215ENST00000575112 SDR42E1Q8WUS8 393 aa9.86□□□□□ -0.83
RPAIN-215ENST00000575112 KCNB2Q92953 911 aa9.86□□□□□ -0.83
RPAIN-215ENST00000575112 CLIC6Q96NY7 704 aa9.86□□□□□ -0.83
RPAIN-215ENST00000575112 TM6SF1Q9BZW5 370 aa9.86□□□□□ -0.83
RPAIN-215ENST00000575112 XPO4Q9C0E2 1151 aaKnown RBP9.86□□□□□ -0.83
RPAIN-215ENST00000575112 PAXBP1Q9Y5B6 917 aa9.86□□□□□ -0.83
RPAIN-215ENST00000575112 FHOD1Q9Y613 1164 aa9.86□□□□□ -0.83
RPAIN-215ENST00000575112 RICTORQ6R327 1708 aa9.86□□□□□ -0.83
RPAIN-215ENST00000575112 MAST3O60307 1309 aa9.86□□□□□ -0.83
RPAIN-215ENST00000575112 WTIPA6NIX2 430 aaPredicted RBP9.86□□□□□ -0.83
RPAIN-215ENST00000575112 EEF2KMTQ96G04 330 aa9.86□□□□□ -0.83
RPAIN-215ENST00000575112 PLIN2Q99541 437 aa9.86□□□□□ -0.83
RPAIN-215ENST00000575112 ZSWIM4Q9H7M6 989 aa9.86□□□□□ -0.83
RPAIN-215ENST00000575112 COPRSQ9NQ92 184 aa9.86□□□□□ -0.83
RPAIN-215ENST00000575112 AKAP2Q9Y2D5 859 aa9.86□□□□□ -0.83
RPAIN-215ENST00000575112 CYP2D7A0A087X1C5 515 aa9.85□□□□□ -0.83
RPAIN-215ENST00000575112 NRDCO43847 1150 aa9.85□□□□□ -0.83
RPAIN-215ENST00000575112 AFMP43652 599 aa9.85□□□□□ -0.83
RPAIN-215ENST00000575112 CFAP100Q494V2 611 aa9.85□□□□□ -0.83
RPAIN-215ENST00000575112 IFNKQ9P0W0 207 aa9.85□□□□□ -0.83
RPAIN-215ENST00000575112 CLIC4Q9Y696 253 aa9.85□□□□□ -0.83
RPAIN-215ENST00000575112 SLC4A4Q9Y6R1 1079 aa9.85□□□□□ -0.83
RPAIN-215ENST00000575112 KIF13AQ9H1H9 1805 aa9.85□□□□□ -0.83
RPAIN-215ENST00000575112 ZNF532Q9HCE3 1301 aa9.85□□□□□ -0.83
RPAIN-215ENST00000575112 PLA2G4AP47712 749 aa9.85□□□□□ -0.83
RPAIN-215ENST00000575112 HNRNPH2P55795 449 aaKnown RBP9.85□□□□□ -0.83
RPAIN-215ENST00000575112 STX17P56962 302 aa9.85□□□□□ -0.83
RPAIN-215ENST00000575112 SAFBQ15424 915 aaKnown RBP eCLIP9.85□□□□□ -0.83
RPAIN-215ENST00000575112 BRINP3Q76B58 766 aa9.85□□□□□ -0.83
RPAIN-215ENST00000575112 NCOA7Q8NI08 942 aa9.85□□□□□ -0.83
RPAIN-215ENST00000575112 HAUS7Q99871 368 aa9.85□□□□□ -0.83
RPAIN-215ENST00000575112 BABAM1Q9NWV8 329 aa9.85□□□□□ -0.83
RPAIN-215ENST00000575112 SLC12A7Q9Y666 1083 aa9.85□□□□□ -0.83
RPAIN-215ENST00000575112 FAM170AA1A519 330 aa9.85□□□□□ -0.83
RPAIN-215ENST00000575112 TFRCP02786 760 aaKnown RBP9.85□□□□□ -0.83
RPAIN-215ENST00000575112 CYP7A1P22680 504 aa9.85□□□□□ -0.83
RPAIN-215ENST00000575112 GYG1P46976 350 aa9.85□□□□□ -0.83
RPAIN-215ENST00000575112 NDUFA8P51970 172 aa9.85□□□□□ -0.83
RPAIN-215ENST00000575112 ZNF827Q17R98 1081 aa9.85□□□□□ -0.83
RPAIN-215ENST00000575112 DPF2Q92785 391 aa9.85□□□□□ -0.83
RPAIN-215ENST00000575112 PPP1R13BQ96KQ4 1090 aa9.85□□□□□ -0.83
RPAIN-215ENST00000575112 UBAC1Q9BSL1 405 aa9.85□□□□□ -0.83
RPAIN-215ENST00000575112 VAT1LQ9HCJ6 419 aa9.85□□□□□ -0.83
RPAIN-215ENST00000575112 HMG20BQ9P0W2 317 aa9.85□□□□□ -0.83
RPAIN-215ENST00000575112 IGHMBP2P38935 993 aaKnown RBP9.84□□□□□ -0.83
RPAIN-215ENST00000575112 IARSP41252 1262 aaKnown RBP9.84□□□□□ -0.83
RPAIN-215ENST00000575112 PDE4CQ08493 712 aa9.84□□□□□ -0.83
RPAIN-215ENST00000575112 TCIRG1Q13488 830 aa9.84□□□□□ -0.83
RPAIN-215ENST00000575112 ARHGAP29Q52LW3 1261 aa9.84□□□□□ -0.83
RPAIN-215ENST00000575112 CCDC34Q96HJ3 373 aa9.84□□□□□ -0.83
RPAIN-215ENST00000575112 SENP2Q9HC62 589 aa9.84□□□□□ -0.83
RPAIN-215ENST00000575112 ERCC3P19447 782 aa9.84□□□□□ -0.83
RPAIN-215ENST00000575112 SKIDA1Q1XH10 827 aa9.84□□□□□ -0.83
RPAIN-215ENST00000575112 SLC3A2P08195 630 aaKnown RBP9.84□□□□□ -0.83
RPAIN-215ENST00000575112 PDIA3P30101 505 aaKnown RBP9.84□□□□□ -0.83
RPAIN-215ENST00000575112 GABPB1Q06547 395 aaPredicted RBP9.84□□□□□ -0.83
RPAIN-215ENST00000575112 CEP57L1Q8IYX8 460 aa9.84□□□□□ -0.83
RPAIN-215ENST00000575112 CRYBG1Q9Y4K1 1723 aa9.84□□□□□ -0.83
RPAIN-215ENST00000575112 USP42Q9H9J4 1324 aaKnown RBP9.83□□□□□ -0.84
RPAIN-215ENST00000575112 SASH3O75995 380 aa9.83□□□□□ -0.84
RPAIN-215ENST00000575112 SLU7O95391 586 aaKnown RBP9.83□□□□□ -0.84
RPAIN-215ENST00000575112 ENGASEQ8NFI3 743 aa9.83□□□□□ -0.84
RPAIN-215ENST00000575112 NKX2-3Q8TAU0 364 aa9.83□□□□□ -0.84
RPAIN-215ENST00000575112 FAM53CQ9NYF3 392 aa9.83□□□□□ -0.84
RPAIN-215ENST00000575112 DNAI1Q9UI46 699 aa9.83□□□□□ -0.84
RPAIN-215ENST00000575112 FMN2Q9NZ56 1722 aa9.83□□□□□ -0.84
RPAIN-215ENST00000575112 TPM4P67936 248 aa9.83□□□□□ -0.84
RPAIN-215ENST00000575112 CCDC191Q8NCU4 936 aa9.83□□□□□ -0.84
RPAIN-215ENST00000575112 NGLY1Q96IV0 654 aa9.83□□□□□ -0.84
RPAIN-215ENST00000575112 C8orf37Q96NL8 207 aa9.83□□□□□ -0.84
RPAIN-215ENST00000575112 PCDHA7Q9UN72 937 aa9.83□□□□□ -0.84
RPAIN-215ENST00000575112 MAPK8IP1Q9UQF2 711 aa9.83□□□□□ -0.84
RPAIN-215ENST00000575112 BAZ2BQ9UIF8 2168 aaKnown RBP9.83□□□□□ -0.84
RPAIN-215ENST00000575112 A0A0U1RQJ8 604 aa9.83□□□□□ -0.84
RPAIN-215ENST00000575112 TMEM232C9JQI7 657 aa9.83□□□□□ -0.84
RPAIN-215ENST00000575112 F8W031 263 aaPredicted RBP9.83□□□□□ -0.84
RPAIN-215ENST00000575112 FOXO4P98177 505 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms