RNA–Protein interactions for RNA: ENST00000574545.1

SCARF1-208, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 894 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-208ENST00000574545 TNS4Q8IZW8 715 aa24.48■■□□□ 1.51
SCARF1-208ENST00000574545 ZNF70Q9UC06 446 aaPredicted RBP24.48■■□□□ 1.51
SCARF1-208ENST00000574545 SUGT1Q9Y2Z0 365 aa24.48■■□□□ 1.51
SCARF1-208ENST00000574545 TDRD3Q9H7E2 651 aaKnown RBP24.47■■□□□ 1.51
SCARF1-208ENST00000574545 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.47■■□□□ 1.51
SCARF1-208ENST00000574545 CA12O43570 354 aa24.46■■□□□ 1.51
SCARF1-208ENST00000574545 LDLRAD1Q5T700 205 aa24.46■■□□□ 1.51
SCARF1-208ENST00000574545 CSRNP1Q96S65 589 aa24.46■■□□□ 1.51
SCARF1-208ENST00000574545 VEZTQ9HBM0 779 aa24.46■■□□□ 1.51
SCARF1-208ENST00000574545 SSC5DA1L4H1 1573 aa24.46■■□□□ 1.51
SCARF1-208ENST00000574545 ZBTB7BO15156 539 aaPredicted RBP24.45■■□□□ 1.5
SCARF1-208ENST00000574545 ADORA1P30542 326 aa24.45■■□□□ 1.5
SCARF1-208ENST00000574545 TIMM10P62072 90 aa24.45■■□□□ 1.5
SCARF1-208ENST00000574545 RASA3Q14644 834 aa24.45■■□□□ 1.5
SCARF1-208ENST00000574545 MAP3K11Q16584 847 aa24.45■■□□□ 1.5
SCARF1-208ENST00000574545 WDR66Q8TBY9 1149 aa24.45■■□□□ 1.5
SCARF1-208ENST00000574545 PHKA1P46020 1223 aa24.44■■□□□ 1.5
SCARF1-208ENST00000574545 TFCP2Q12800 502 aa24.44■■□□□ 1.5
SCARF1-208ENST00000574545 TTLL12Q14166 644 aaPredicted RBP24.44■■□□□ 1.5
SCARF1-208ENST00000574545 NBPF12Q5TAG4 269 aaPredicted RBP24.44■■□□□ 1.5
SCARF1-208ENST00000574545 ARMC9Q7Z3E5 817 aa24.44■■□□□ 1.5
SCARF1-208ENST00000574545 TSKSQ9UJT2 592 aa24.44■■□□□ 1.5
SCARF1-208ENST00000574545 FZD1Q9UP38 647 aa24.44■■□□□ 1.5
SCARF1-208ENST00000574545 PRKG1Q13976 671 aa24.43■■□□□ 1.5
SCARF1-208ENST00000574545 POLA2Q14181 598 aa24.43■■□□□ 1.5
SCARF1-208ENST00000574545 CCDC102BQ68D86 513 aa24.43■■□□□ 1.5
SCARF1-208ENST00000574545 APOBEC3HQ6NTF7 200 aaKnown RBP24.43■■□□□ 1.5
SCARF1-208ENST00000574545 TEKT1Q969V4 418 aa24.43■■□□□ 1.5
SCARF1-208ENST00000574545 ZDHHC15Q96MV8 337 aa24.43■■□□□ 1.5
SCARF1-208ENST00000574545 ATP8B2P98198 1209 aa24.42■■□□□ 1.5
SCARF1-208ENST00000574545 SUPT20HL1Q3ZLR7 823 aa24.42■■□□□ 1.5
SCARF1-208ENST00000574545 HHIPL2Q6UWX4 724 aa24.42■■□□□ 1.5
SCARF1-208ENST00000574545 FTSJ3Q8IY81 847 aaKnown RBP24.42■■□□□ 1.5
SCARF1-208ENST00000574545 TEPSINQ96N21 525 aa24.42■■□□□ 1.5
SCARF1-208ENST00000574545 GNL3LQ9NVN8 582 aaKnown RBP24.42■■□□□ 1.5
SCARF1-208ENST00000574545 ANGEL1Q9UNK9 670 aaKnown RBP24.42■■□□□ 1.5
SCARF1-208ENST00000574545 SALL1Q9NSC2 1324 aa24.41■■□□□ 1.5
SCARF1-208ENST00000574545 A0A1B0GUL7 405 aa24.41■■□□□ 1.5
SCARF1-208ENST00000574545 SEMA3EO15041 775 aa24.41■■□□□ 1.5
SCARF1-208ENST00000574545 SSH3Q8TE77 659 aa24.41■■□□□ 1.5
SCARF1-208ENST00000574545 AKAP2Q9Y2D5 859 aa24.41■■□□□ 1.5
SCARF1-208ENST00000574545 MAST3O60307 1309 aa24.4■■□□□ 1.5
SCARF1-208ENST00000574545 TNFAIP1Q13829 316 aa24.4■■□□□ 1.5
SCARF1-208ENST00000574545 REM2Q8IYK8 340 aaPredicted RBP24.4■■□□□ 1.5
SCARF1-208ENST00000574545 XAGE2Q96GT9 111 aa24.4■■□□□ 1.5
SCARF1-208ENST00000574545 DENND2AQ9ULE3 1009 aa24.4■■□□□ 1.5
SCARF1-208ENST00000574545 MYH13Q9UKX3 1938 aa24.39■■□□□ 1.5
SCARF1-208ENST00000574545 USP2O75604 605 aaPredicted RBP24.39■■□□□ 1.49
SCARF1-208ENST00000574545 ITPRIPQ8IWB1 547 aa24.39■■□□□ 1.49
SCARF1-208ENST00000574545 CDAN1Q8IWY9 1227 aa24.39■■□□□ 1.49
SCARF1-208ENST00000574545 RNF186Q9NXI6 227 aa24.39■■□□□ 1.49
SCARF1-208ENST00000574545 SAGE1Q9NXZ1 904 aa24.39■■□□□ 1.49
SCARF1-208ENST00000574545 UNCXA6NJT0 531 aa24.38■■□□□ 1.49
SCARF1-208ENST00000574545 TCP10L2B9ZVM9 353 aa24.38■■□□□ 1.49
SCARF1-208ENST00000574545 PPP1R12BO60237 982 aaPredicted RBP24.38■■□□□ 1.49
SCARF1-208ENST00000574545 PRDX5P30044 214 aa24.38■■□□□ 1.49
SCARF1-208ENST00000574545 G3BP1Q13283 466 aaKnown RBP eCLIP24.38■■□□□ 1.49
SCARF1-208ENST00000574545 C1orf115Q9H7X2 142 aa24.38■■□□□ 1.49
SCARF1-208ENST00000574545 FKBP1CQ5VVH2 108 aa24.37■■□□□ 1.49
SCARF1-208ENST00000574545 PANK1Q8TE04 598 aa24.37■■□□□ 1.49
SCARF1-208ENST00000574545 TMEM39BQ9GZU3 492 aa24.37■■□□□ 1.49
SCARF1-208ENST00000574545 PDS5AQ29RF7 1337 aaKnown RBP24.36■■□□□ 1.49
SCARF1-208ENST00000574545 TM4SF4P48230 202 aa24.36■■□□□ 1.49
SCARF1-208ENST00000574545 RASGRF1Q13972 1273 aa24.36■■□□□ 1.49
SCARF1-208ENST00000574545 TRPA1O75762 1119 aa24.35■■□□□ 1.49
SCARF1-208ENST00000574545 TNNI2P48788 182 aa24.35■■□□□ 1.49
SCARF1-208ENST00000574545 CACNB3P54284 484 aa24.35■■□□□ 1.49
SCARF1-208ENST00000574545 DIXDC1Q155Q3 683 aa24.35■■□□□ 1.49
SCARF1-208ENST00000574545 CLMNQ96JQ2 1002 aa24.35■■□□□ 1.49
SCARF1-208ENST00000574545 NOP58Q9Y2X3 529 aaKnown RBP24.35■■□□□ 1.49
SCARF1-208ENST00000574545 DAGLAQ9Y4D2 1042 aa24.35■■□□□ 1.49
SCARF1-208ENST00000574545 AKAP11Q9UKA4 1901 aa24.34■■□□□ 1.49
SCARF1-208ENST00000574545 LDHBP07195 334 aaKnown RBP24.34■■□□□ 1.49
SCARF1-208ENST00000574545 MVPQ14764 893 aaKnown RBP24.34■■□□□ 1.49
SCARF1-208ENST00000574545 SPRYD7Q5W111 196 aa24.34■■□□□ 1.49
SCARF1-208ENST00000574545 FAM83AQ86UY5 434 aa24.34■■□□□ 1.49
SCARF1-208ENST00000574545 NEUROD6Q96NK8 337 aa24.34■■□□□ 1.49
SCARF1-208ENST00000574545 GPR108Q9NPR9 543 aa24.34■■□□□ 1.49
SCARF1-208ENST00000574545 CASP8AP2Q9UKL3 1982 aa24.34■■□□□ 1.49
SCARF1-208ENST00000574545 SLC10A4Q96EP9 437 aa24.33■■□□□ 1.49
SCARF1-208ENST00000574545 IREB2P48200 963 aaKnown RBP24.32■■□□□ 1.48
SCARF1-208ENST00000574545 MKRN3Q13064 507 aaKnown RBP24.32■■□□□ 1.48
SCARF1-208ENST00000574545 ZGPATQ8N5A5 531 aaKnown RBP24.32■■□□□ 1.48
SCARF1-208ENST00000574545 ARID4AP29374 1257 aaPredicted RBP24.31■■□□□ 1.48
SCARF1-208ENST00000574545 CDC42EP5Q6NZY7 148 aa24.31■■□□□ 1.48
SCARF1-208ENST00000574545 CEP85Q6P2H3 762 aa24.31■■□□□ 1.48
SCARF1-208ENST00000574545 ANKRD13AQ8IZ07 590 aa24.31■■□□□ 1.48
SCARF1-208ENST00000574545 HMG20BQ9P0W2 317 aa24.31■■□□□ 1.48
SCARF1-208ENST00000574545 SURF6O75683 361 aaKnown RBP24.3■■□□□ 1.48
SCARF1-208ENST00000574545 ZBTB48P10074 688 aaPredicted RBP24.3■■□□□ 1.48
SCARF1-208ENST00000574545 MS4A1P11836 297 aa24.3■■□□□ 1.48
SCARF1-208ENST00000574545 WNK4Q96J92 1243 aa24.3■■□□□ 1.48
SCARF1-208ENST00000574545 TMOD2Q9NZR1 351 aa24.3■■□□□ 1.48
SCARF1-208ENST00000574545 RCAN3Q9UKA8 241 aa24.3■■□□□ 1.48
SCARF1-208ENST00000574545 GAKO14976 1311 aa24.3■■□□□ 1.48
SCARF1-208ENST00000574545 TNNI3KQ59H18 835 aa24.29■■□□□ 1.48
SCARF1-208ENST00000574545 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.29■■□□□ 1.48
SCARF1-208ENST00000574545 FAM163AQ96GL9 167 aaPredicted RBP24.29■■□□□ 1.48
SCARF1-208ENST00000574545 FPGT-TNNI3KV9GXZ4 949 aa24.29■■□□□ 1.48
SCARF1-208ENST00000574545 RPAP1Q9BWH6 1393 aaPredicted RBP24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms