RNA–Protein interactions for RNA: ENST00000574151.5

HCFC1R1-206, Transcript of host cell factor C1 regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC1R1, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-206ENST00000574151 ZBED3Q96IU2 234 aaPredicted RBP12.66□□□□□ -0.38
HCFC1R1-206ENST00000574151 SALL2Q9Y467 1007 aaPredicted RBP12.66□□□□□ -0.38
HCFC1R1-206ENST00000574151 PCDHAC2Q9Y5I4 1007 aa12.66□□□□□ -0.38
HCFC1R1-206ENST00000574151 MYO3BQ8WXR4 1341 aa12.65□□□□□ -0.38
HCFC1R1-206ENST00000574151 BTBD19C9JJ37 291 aa12.65□□□□□ -0.38
HCFC1R1-206ENST00000574151 PRKCZQ05513 592 aa12.65□□□□□ -0.38
HCFC1R1-206ENST00000574151 PDIA6Q15084 440 aa12.65□□□□□ -0.38
HCFC1R1-206ENST00000574151 DLGAP5Q15398 846 aa12.65□□□□□ -0.38
HCFC1R1-206ENST00000574151 CCDC27Q2M243 656 aa12.65□□□□□ -0.38
HCFC1R1-206ENST00000574151 TJAP1Q5JTD0 557 aa12.65□□□□□ -0.38
HCFC1R1-206ENST00000574151 LRP10Q7Z4F1 713 aa12.65□□□□□ -0.38
HCFC1R1-206ENST00000574151 SNX27Q96L92 541 aa12.65□□□□□ -0.38
HCFC1R1-206ENST00000574151 VEZTQ9HBM0 779 aa12.65□□□□□ -0.38
HCFC1R1-206ENST00000574151 SPEF2Q9C093 1822 aa12.65□□□□□ -0.39
HCFC1R1-206ENST00000574151 ELNP15502 786 aa12.64□□□□□ -0.39
HCFC1R1-206ENST00000574151 MDM2Q00987 491 aaPredicted RBP12.64□□□□□ -0.39
HCFC1R1-206ENST00000574151 AAMPQ13685 434 aa12.64□□□□□ -0.39
HCFC1R1-206ENST00000574151 STRIP1Q5VSL9 837 aa12.64□□□□□ -0.39
HCFC1R1-206ENST00000574151 TTLL5Q6EMB2 1281 aa12.64□□□□□ -0.39
HCFC1R1-206ENST00000574151 C17orf99Q6UX52 265 aa12.64□□□□□ -0.39
HCFC1R1-206ENST00000574151 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.64□□□□□ -0.39
HCFC1R1-206ENST00000574151 WDR63Q8IWG1 891 aa12.64□□□□□ -0.39
HCFC1R1-206ENST00000574151 GABRQQ9UN88 632 aa12.64□□□□□ -0.39
HCFC1R1-206ENST00000574151 PPP2R3BQ9Y5P8 575 aa12.64□□□□□ -0.39
HCFC1R1-206ENST00000574151 DDX60LQ5H9U9 1706 aaKnown RBP12.63□□□□□ -0.39
HCFC1R1-206ENST00000574151 ATP2B4P23634 1241 aa12.63□□□□□ -0.39
HCFC1R1-206ENST00000574151 IRX6P78412 446 aaPredicted RBP12.63□□□□□ -0.39
HCFC1R1-206ENST00000574151 B4GALNT3Q6L9W6 998 aa12.63□□□□□ -0.39
HCFC1R1-206ENST00000574151 SLAIN1Q8ND83 568 aa12.63□□□□□ -0.39
HCFC1R1-206ENST00000574151 HELBQ8NG08 1087 aaPredicted RBP12.63□□□□□ -0.39
HCFC1R1-206ENST00000574151 XAGE3Q8WTP9 111 aa12.63□□□□□ -0.39
HCFC1R1-206ENST00000574151 CHMP4AQ9BY43 222 aa12.63□□□□□ -0.39
HCFC1R1-206ENST00000574151 SEMA6BQ9H3T3 888 aa12.63□□□□□ -0.39
HCFC1R1-206ENST00000574151 TCF20Q9UGU0 1960 aaKnown RBP12.63□□□□□ -0.39
HCFC1R1-206ENST00000574151 XDHP47989 1333 aa12.62□□□□□ -0.39
HCFC1R1-206ENST00000574151 ATP5J2-PTCD1G3V325 749 aa12.62□□□□□ -0.39
HCFC1R1-206ENST00000574151 IRS4O14654 1257 aaPredicted RBP12.62□□□□□ -0.39
HCFC1R1-206ENST00000574151 ADCY3O60266 1144 aa12.62□□□□□ -0.39
HCFC1R1-206ENST00000574151 INHAP05111 366 aa12.62□□□□□ -0.39
HCFC1R1-206ENST00000574151 CETPP11597 493 aa12.62□□□□□ -0.39
HCFC1R1-206ENST00000574151 GNAI1P63096 354 aa12.62□□□□□ -0.39
HCFC1R1-206ENST00000574151 VGLL4Q14135 290 aa12.62□□□□□ -0.39
HCFC1R1-206ENST00000574151 RASA3Q14644 834 aa12.62□□□□□ -0.39
HCFC1R1-206ENST00000574151 CCDC85AQ96PX6 553 aaPredicted RBP12.62□□□□□ -0.39
HCFC1R1-206ENST00000574151 BABAM1Q9NWV8 329 aa12.62□□□□□ -0.39
HCFC1R1-206ENST00000574151 LAS1LQ9Y4W2 734 aaKnown RBP12.62□□□□□ -0.39
HCFC1R1-206ENST00000574151 ZNF804BA4D1E1 1349 aa12.62□□□□□ -0.39
HCFC1R1-206ENST00000574151 FOSL2P15408 326 aa12.61□□□□□ -0.39
HCFC1R1-206ENST00000574151 GOLGA2Q08379 1002 aa12.61□□□□□ -0.39
HCFC1R1-206ENST00000574151 WWC1Q8IX03 1113 aa12.61□□□□□ -0.39
HCFC1R1-206ENST00000574151 CRISPLD2Q9H0B8 497 aa12.61□□□□□ -0.39
HCFC1R1-206ENST00000574151 MYH16Q9H6N6 1097 aa12.61□□□□□ -0.39
HCFC1R1-206ENST00000574151 AOX1Q06278 1338 aa12.61□□□□□ -0.39
HCFC1R1-206ENST00000574151 MYO9BQ13459 2157 aa12.6□□□□□ -0.39
HCFC1R1-206ENST00000574151 F8W031 263 aaPredicted RBP12.6□□□□□ -0.39
HCFC1R1-206ENST00000574151 MYO1BO43795 1136 aa12.6□□□□□ -0.39
HCFC1R1-206ENST00000574151 MMP14P50281 582 aa12.6□□□□□ -0.39
HCFC1R1-206ENST00000574151 GTF2IP78347 998 aa12.6□□□□□ -0.39
HCFC1R1-206ENST00000574151 MAP3K9P80192 1104 aa12.6□□□□□ -0.39
HCFC1R1-206ENST00000574151 TXNRD3Q86VQ6 643 aa12.6□□□□□ -0.39
HCFC1R1-206ENST00000574151 PRMT6Q96LA8 375 aaPredicted RBP12.6□□□□□ -0.39
HCFC1R1-206ENST00000574151 TAOK2Q9UL54 1235 aa12.6□□□□□ -0.39
HCFC1R1-206ENST00000574151 CSADQ9Y600 493 aa12.6□□□□□ -0.39
HCFC1R1-206ENST00000574151 CDH23Q9H251 3354 aa12.59□□□□□ -0.39
HCFC1R1-206ENST00000574151 NBPF3Q9H094 633 aa12.59□□□□□ -0.39
HCFC1R1-206ENST00000574151 PAK6Q9NQU5 681 aaPredicted RBP12.59□□□□□ -0.39
HCFC1R1-206ENST00000574151 FAM205AQ6ZU69 1335 aa12.59□□□□□ -0.39
HCFC1R1-206ENST00000574151 SYNGAP1Q96PV0 1343 aa12.59□□□□□ -0.39
HCFC1R1-206ENST00000574151 MED23Q9ULK4 1368 aa12.58□□□□□ -0.4
HCFC1R1-206ENST00000574151 CAPN2P17655 700 aa12.58□□□□□ -0.4
HCFC1R1-206ENST00000574151 FCGRTP55899 365 aa12.58□□□□□ -0.4
HCFC1R1-206ENST00000574151 CFAP100Q494V2 611 aa12.58□□□□□ -0.4
HCFC1R1-206ENST00000574151 ALYREFQ86V81 257 aaKnown RBP12.58□□□□□ -0.4
HCFC1R1-206ENST00000574151 CDAN1Q8IWY9 1227 aa12.58□□□□□ -0.4
HCFC1R1-206ENST00000574151 COA1Q9GZY4 146 aa12.58□□□□□ -0.4
HCFC1R1-206ENST00000574151 ZCCHC17Q9NP64 241 aaKnown RBP12.58□□□□□ -0.4
HCFC1R1-206ENST00000574151 TRIM35Q9UPQ4 493 aa12.58□□□□□ -0.4
HCFC1R1-206ENST00000574151 IL16Q14005 1332 aa12.58□□□□□ -0.4
HCFC1R1-206ENST00000574151 E9PSI1 815 aa12.57□□□□□ -0.4
HCFC1R1-206ENST00000574151 IRF6O14896 467 aa12.57□□□□□ -0.4
HCFC1R1-206ENST00000574151 FLT3LGP49771 235 aa12.57□□□□□ -0.4
HCFC1R1-206ENST00000574151 RBM5P52756 815 aaKnown RBP eCLIP12.57□□□□□ -0.4
HCFC1R1-206ENST00000574151 SNAPC2Q13487 334 aa12.57□□□□□ -0.4
HCFC1R1-206ENST00000574151 ANKRD18AQ8IVF6 992 aa12.57□□□□□ -0.4
HCFC1R1-206ENST00000574151 USP38Q8NB14 1042 aa12.57□□□□□ -0.4
HCFC1R1-206ENST00000574151 C11orf49Q9H6J7 331 aa12.57□□□□□ -0.4
HCFC1R1-206ENST00000574151 IFT57Q9NWB7 429 aa12.57□□□□□ -0.4
HCFC1R1-206ENST00000574151 TSPYL4Q9UJ04 414 aa12.57□□□□□ -0.4
HCFC1R1-206ENST00000574151 COL2A1P02458 1487 aaPredicted RBP12.57□□□□□ -0.4
HCFC1R1-206ENST00000574151 ADGRA2Q96PE1 1338 aa12.57□□□□□ -0.4
HCFC1R1-206ENST00000574151 SPDYE5A6NIY4 337 aa12.56□□□□□ -0.4
HCFC1R1-206ENST00000574151 PDHXO00330 501 aa12.56□□□□□ -0.4
HCFC1R1-206ENST00000574151 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.56□□□□□ -0.43e-9■■■□□ 16.8
HCFC1R1-206ENST00000574151 ISCA1Q9BUE6 129 aa12.56□□□□□ -0.4
HCFC1R1-206ENST00000574151 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.56□□□□□ -0.4
HCFC1R1-206ENST00000574151 TTYH1Q9H313 450 aaPredicted RBP12.56□□□□□ -0.4
HCFC1R1-206ENST00000574151 ZNF521Q96K83 1311 aa12.56□□□□□ -0.4
HCFC1R1-206ENST00000574151 PIEZO1Q92508 2521 aa12.55□□□□□ -0.4
HCFC1R1-206ENST00000574151 SPDYE2BA6NHP3 402 aa12.55□□□□□ -0.4
HCFC1R1-206ENST00000574151 SPDYE6P0CI01 402 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms