RNA–Protein interactions for RNA: ENST00000574109.5

NDE1-209, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 843 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-209ENST00000574109 LRP2BPQ9P2M1 347 aa16.47■□□□□ 0.23
NDE1-209ENST00000574109 ABCF2Q9UG63 623 aa16.47■□□□□ 0.23
NDE1-209ENST00000574109 CDK5RAP2Q96SN8 1893 aa16.46■□□□□ 0.23
NDE1-209ENST00000574109 CYP2E1P05181 493 aaPredicted RBP16.46■□□□□ 0.23
NDE1-209ENST00000574109 VEGFAP15692 232 aaPredicted RBP16.46■□□□□ 0.23
NDE1-209ENST00000574109 MAP3K12Q12852 859 aa16.46■□□□□ 0.23
NDE1-209ENST00000574109 ZSCAN25Q6NSZ9 544 aa16.46■□□□□ 0.23
NDE1-209ENST00000574109 PNMA8AQ86V59 439 aaPredicted RBP16.46■□□□□ 0.23
NDE1-209ENST00000574109 KIAA0825Q8IV33 1275 aa16.46■□□□□ 0.23
NDE1-209ENST00000574109 OTUD7AQ8TE49 926 aaPredicted RBP16.46■□□□□ 0.23
NDE1-209ENST00000574109 TEKT1Q969V4 418 aa16.46■□□□□ 0.23
NDE1-209ENST00000574109 TTF2Q9UNY4 1162 aaKnown RBP16.46■□□□□ 0.23
NDE1-209ENST00000574109 JAG2Q9Y219 1238 aa16.46■□□□□ 0.23
NDE1-209ENST00000574109 ZBTB12Q9Y330 459 aaPredicted RBP16.46■□□□□ 0.23
NDE1-209ENST00000574109 GOLIM4O00461 696 aa16.45■□□□□ 0.22
NDE1-209ENST00000574109 PRDX5P30044 214 aa16.45■□□□□ 0.22
NDE1-209ENST00000574109 USP50Q70EL3 339 aaPredicted RBP16.45■□□□□ 0.22
NDE1-209ENST00000574109 C16orf71Q8IYS4 520 aaPredicted RBP16.45■□□□□ 0.22
NDE1-209ENST00000574109 CNTROBQ8N137 903 aa16.45■□□□□ 0.22
NDE1-209ENST00000574109 MTMR14Q8NCE2 650 aa16.45■□□□□ 0.22
NDE1-209ENST00000574109 GPBP1L1Q9HC44 474 aaPredicted RBP16.45■□□□□ 0.22
NDE1-209ENST00000574109 SNRKQ9NRH2 765 aa16.45■□□□□ 0.22
NDE1-209ENST00000574109 CNOT7Q9UIV1 285 aaKnown RBP16.45■□□□□ 0.22
NDE1-209ENST00000574109 LDHCP07864 332 aa16.44■□□□□ 0.22
NDE1-209ENST00000574109 PDE4AP27815 886 aa16.44■□□□□ 0.22
NDE1-209ENST00000574109 TSHZ3Q63HK5 1081 aa16.44■□□□□ 0.22
NDE1-209ENST00000574109 HHIPL2Q6UWX4 724 aa16.44■□□□□ 0.22
NDE1-209ENST00000574109 EVI5LQ96CN4 794 aa16.44■□□□□ 0.22
NDE1-209ENST00000574109 MYOZ2Q9NPC6 264 aa16.44■□□□□ 0.22
NDE1-209ENST00000574109 RAI14Q9P0K7 980 aa16.44■□□□□ 0.22
NDE1-209ENST00000574109 MYO1BO43795 1136 aa16.43■□□□□ 0.22
NDE1-209ENST00000574109 IDH1O75874 414 aaKnown RBP16.43■□□□□ 0.22
NDE1-209ENST00000574109 MAP4K4O95819 1239 aaPredicted RBP16.43■□□□□ 0.22
NDE1-209ENST00000574109 ZFYP08048 801 aaPredicted RBP16.43■□□□□ 0.22
NDE1-209ENST00000574109 EPHX2P34913 555 aa16.43■□□□□ 0.22
NDE1-209ENST00000574109 KIF4BQ2VIQ3 1234 aa16.43■□□□□ 0.22
NDE1-209ENST00000574109 KBTBD3Q8NAB2 608 aa16.43■□□□□ 0.22
NDE1-209ENST00000574109 NOL10Q9BSC4 688 aaKnown RBP16.43■□□□□ 0.22
NDE1-209ENST00000574109 MXD3Q9BW11 206 aa16.43■□□□□ 0.22
NDE1-209ENST00000574109 NAV1Q8NEY1 1877 aa16.43■□□□□ 0.22
NDE1-209ENST00000574109 MROH7-TTC4A0A0A0MT08 1334 aa16.43■□□□□ 0.22
NDE1-209ENST00000574109 GAKO14976 1311 aa16.43■□□□□ 0.22
NDE1-209ENST00000574109 DLGAP5Q15398 846 aa16.42■□□□□ 0.22
NDE1-209ENST00000574109 TTC22Q5TAA0 569 aa16.42■□□□□ 0.22
NDE1-209ENST00000574109 NAA16Q6N069 864 aaPredicted RBP16.42■□□□□ 0.22
NDE1-209ENST00000574109 NSUN4Q96CB9 384 aaKnown RBP16.42■□□□□ 0.22
NDE1-209ENST00000574109 FAM163AQ96GL9 167 aaPredicted RBP16.42■□□□□ 0.22
NDE1-209ENST00000574109 ZDHHC15Q96MV8 337 aa16.42■□□□□ 0.22
NDE1-209ENST00000574109 TAF1DQ9H5J8 278 aaPredicted RBP16.42■□□□□ 0.22
NDE1-209ENST00000574109 PIH1D3Q9NQM4 214 aaKnown RBP16.42■□□□□ 0.22
NDE1-209ENST00000574109 F8W031 263 aaPredicted RBP16.41■□□□□ 0.22
NDE1-209ENST00000574109 PLCG2P16885 1265 aa16.41■□□□□ 0.22
NDE1-209ENST00000574109 CRKP46108 304 aa16.41■□□□□ 0.22
NDE1-209ENST00000574109 MECOMQ03112 1051 aa16.41■□□□□ 0.22
NDE1-209ENST00000574109 ZC3H15Q8WU90 426 aaKnown RBP16.41■□□□□ 0.22
NDE1-209ENST00000574109 FSD1Q9BTV5 496 aa16.41■□□□□ 0.22
NDE1-209ENST00000574109 PITPNM2Q9BZ72 1349 aa16.41■□□□□ 0.22
NDE1-209ENST00000574109 POLR2AP24928 1970 aaKnown RBP16.4■□□□□ 0.22
NDE1-209ENST00000574109 SPDYE2BA6NHP3 402 aa16.4■□□□□ 0.22
NDE1-209ENST00000574109 HIP1O00291 1037 aa16.4■□□□□ 0.22
NDE1-209ENST00000574109 SPDYE6P0CI01 402 aa16.4■□□□□ 0.22
NDE1-209ENST00000574109 EPS15P42566 896 aa16.4■□□□□ 0.22
NDE1-209ENST00000574109 RBM5P52756 815 aaKnown RBP eCLIP16.4■□□□□ 0.22
NDE1-209ENST00000574109 CFAP100Q494V2 611 aa16.4■□□□□ 0.22
NDE1-209ENST00000574109 TBC1D9Q6ZT07 1266 aa16.4■□□□□ 0.22
NDE1-209ENST00000574109 ANTXR1Q9H6X2 564 aa16.4■□□□□ 0.22
NDE1-209ENST00000574109 TMOD2Q9NZR1 351 aa16.4■□□□□ 0.22
NDE1-209ENST00000574109 TRPM7Q96QT4 1865 aa16.39■□□□□ 0.22
NDE1-209ENST00000574109 DDX60LQ5H9U9 1706 aaKnown RBP16.39■□□□□ 0.21
NDE1-209ENST00000574109 TRIM6-TRIM34B2RNG4 842 aa16.39■□□□□ 0.21
NDE1-209ENST00000574109 BAG3O95817 575 aa16.39■□□□□ 0.21
NDE1-209ENST00000574109 PDE6AP16499 860 aa16.39■□□□□ 0.21
NDE1-209ENST00000574109 UBE3CQ15386 1083 aa16.39■□□□□ 0.21
NDE1-209ENST00000574109 BMP2KLQ5H9B9 411 aa16.39■□□□□ 0.21
NDE1-209ENST00000574109 SLC9C2Q5TAH2 1124 aa16.39■□□□□ 0.21
NDE1-209ENST00000574109 LDHDQ86WU2 507 aa16.39■□□□□ 0.21
NDE1-209ENST00000574109 ZNF526Q8TF50 670 aaPredicted RBP16.39■□□□□ 0.21
NDE1-209ENST00000574109 ZBED3Q96IU2 234 aaPredicted RBP16.39■□□□□ 0.21
NDE1-209ENST00000574109 NMRK2Q9NPI5 230 aa16.39■□□□□ 0.21
NDE1-209ENST00000574109 DAGLAQ9Y4D2 1042 aa16.39■□□□□ 0.21
NDE1-209ENST00000574109 GTF3C3Q9Y5Q9 886 aa16.39■□□□□ 0.21
NDE1-209ENST00000574109 NDUFB9Q9Y6M9 179 aa16.39■□□□□ 0.21
NDE1-209ENST00000574109 MYH1P12882 1939 aa16.39■□□□□ 0.21
NDE1-209ENST00000574109 LAMB1P07942 1786 aa16.38■□□□□ 0.21
NDE1-209ENST00000574109 POTECB2RU33 542 aa16.38■□□□□ 0.21
NDE1-209ENST00000574109 ADD2P35612 726 aa16.38■□□□□ 0.21
NDE1-209ENST00000574109 TNFAIP1Q13829 316 aa16.38■□□□□ 0.21
NDE1-209ENST00000574109 GRIK5Q16478 980 aa16.38■□□□□ 0.21
NDE1-209ENST00000574109 APOBEC3FQ8IUX4 373 aaKnown RBP16.38■□□□□ 0.21
NDE1-209ENST00000574109 MAGEB6Q8N7X4 407 aa16.38■□□□□ 0.21
NDE1-209ENST00000574109 ZNF784Q8NCA9 323 aaPredicted RBP16.38■□□□□ 0.21
NDE1-209ENST00000574109 RRAGCQ9HB90 399 aa16.38■□□□□ 0.21
NDE1-209ENST00000574109 COL2A1P02458 1487 aaPredicted RBP16.37■□□□□ 0.21
NDE1-209ENST00000574109 WNT10BO00744 389 aa16.37■□□□□ 0.21
NDE1-209ENST00000574109 DIXDC1Q155Q3 683 aa16.37■□□□□ 0.21
NDE1-209ENST00000574109 TBC1D10BQ4KMP7 808 aaPredicted RBP16.37■□□□□ 0.21
NDE1-209ENST00000574109 FKBP1CQ5VVH2 108 aa16.37■□□□□ 0.21
NDE1-209ENST00000574109 TRPM4Q8TD43 1214 aa16.37■□□□□ 0.21
NDE1-209ENST00000574109 APPBP2Q92624 585 aa16.37■□□□□ 0.21
NDE1-209ENST00000574109 EDC3Q96F86 508 aaKnown RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms