RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 HMG20BQ9P0W2 317 aa15.6■□□□□ 0.09
TRAPPC1-206ENST00000573989 AKAP11Q9UKA4 1901 aa15.6■□□□□ 0.09
TRAPPC1-206ENST00000573989 COL1A1P02452 1464 aaPredicted RBP15.59■□□□□ 0.09
TRAPPC1-206ENST00000573989 WNT10BO00744 389 aa15.59■□□□□ 0.09
TRAPPC1-206ENST00000573989 EGFRP00533 1210 aa15.59■□□□□ 0.09
TRAPPC1-206ENST00000573989 MAP1SQ66K74 1059 aaPredicted RBP15.59■□□□□ 0.09
TRAPPC1-206ENST00000573989 ERICH6Q7L0X2 663 aa15.59■□□□□ 0.09
TRAPPC1-206ENST00000573989 SULF1Q8IWU6 871 aa15.59■□□□□ 0.09
TRAPPC1-206ENST00000573989 PITPNM2Q9BZ72 1349 aa15.59■□□□□ 0.09
TRAPPC1-206ENST00000573989 MYH2Q9UKX2 1941 aa15.58■□□□□ 0.09
TRAPPC1-206ENST00000573989 SMARCA5O60264 1052 aaPredicted RBP15.58■□□□□ 0.08
TRAPPC1-206ENST00000573989 IGSF3O75054 1194 aa15.58■□□□□ 0.08
TRAPPC1-206ENST00000573989 CRKP46108 304 aa15.58■□□□□ 0.08
TRAPPC1-206ENST00000573989 NBPF9Q3BBW0 867 aa15.58■□□□□ 0.08
TRAPPC1-206ENST00000573989 HHIPL2Q6UWX4 724 aa15.58■□□□□ 0.08
TRAPPC1-206ENST00000573989 DZIP1Q86YF9 867 aaKnown RBP15.58■□□□□ 0.08
TRAPPC1-206ENST00000573989 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.58■□□□□ 0.08
TRAPPC1-206ENST00000573989 GGA3Q9NZ52 723 aa15.58■□□□□ 0.08
TRAPPC1-206ENST00000573989 LRP2BPQ9P2M1 347 aa15.58■□□□□ 0.08
TRAPPC1-206ENST00000573989 TRPM7Q96QT4 1865 aa15.57■□□□□ 0.08
TRAPPC1-206ENST00000573989 SPDYE2BA6NHP3 402 aa15.57■□□□□ 0.08
TRAPPC1-206ENST00000573989 SPDYE6P0CI01 402 aa15.57■□□□□ 0.08
TRAPPC1-206ENST00000573989 PRDX5P30044 214 aa15.57■□□□□ 0.08
TRAPPC1-206ENST00000573989 GSTO1P78417 241 aa15.57■□□□□ 0.08
TRAPPC1-206ENST00000573989 ANKRD45Q5TZF3 282 aa15.57■□□□□ 0.08
TRAPPC1-206ENST00000573989 ANGEL2Q5VTE6 544 aaKnown RBP15.57■□□□□ 0.08
TRAPPC1-206ENST00000573989 KRT26Q7Z3Y9 468 aa15.57■□□□□ 0.08
TRAPPC1-206ENST00000573989 APOBEC3FQ8IUX4 373 aaKnown RBP15.57■□□□□ 0.08
TRAPPC1-206ENST00000573989 ZBED3Q96IU2 234 aaPredicted RBP15.57■□□□□ 0.08
TRAPPC1-206ENST00000573989 ITGBL1O95965 494 aaPredicted RBP15.56■□□□□ 0.08
TRAPPC1-206ENST00000573989 LDHCP07864 332 aa15.56■□□□□ 0.08
TRAPPC1-206ENST00000573989 TTF1Q15361 905 aaPredicted RBP15.56■□□□□ 0.08
TRAPPC1-206ENST00000573989 GRIK5Q16478 980 aa15.56■□□□□ 0.08
TRAPPC1-206ENST00000573989 PI16Q6UXB8 463 aa15.56■□□□□ 0.08
TRAPPC1-206ENST00000573989 ZDHHC15Q96MV8 337 aa15.56■□□□□ 0.08
TRAPPC1-206ENST00000573989 SNRKQ9NRH2 765 aa15.56■□□□□ 0.08
TRAPPC1-206ENST00000573989 RAI14Q9P0K7 980 aa15.56■□□□□ 0.08
TRAPPC1-206ENST00000573989 HSPA6P17066 643 aa15.55■□□□□ 0.08
TRAPPC1-206ENST00000573989 ZAP70P43403 619 aa15.55■□□□□ 0.08
TRAPPC1-206ENST00000573989 TNFAIP1Q13829 316 aa15.55■□□□□ 0.08
TRAPPC1-206ENST00000573989 PRMT6Q96LA8 375 aaPredicted RBP15.55■□□□□ 0.08
TRAPPC1-206ENST00000573989 GLIS2Q9BZE0 524 aaPredicted RBP15.55■□□□□ 0.08
TRAPPC1-206ENST00000573989 TMOD2Q9NZR1 351 aa15.55■□□□□ 0.08
TRAPPC1-206ENST00000573989 PASKQ96RG2 1323 aa15.54■□□□□ 0.08
TRAPPC1-206ENST00000573989 ERC2O15083 957 aa15.54■□□□□ 0.08
TRAPPC1-206ENST00000573989 CYP2E1P05181 493 aaPredicted RBP15.54■□□□□ 0.08
TRAPPC1-206ENST00000573989 ATP5JP18859 108 aa15.54■□□□□ 0.08
TRAPPC1-206ENST00000573989 APLP1P51693 650 aa15.54■□□□□ 0.08
TRAPPC1-206ENST00000573989 TMED8Q6PL24 325 aaPredicted RBP15.54■□□□□ 0.08
TRAPPC1-206ENST00000573989 TBC1D9Q6ZT07 1266 aa15.54■□□□□ 0.08
TRAPPC1-206ENST00000573989 USP48Q86UV5 1035 aa15.54■□□□□ 0.08
TRAPPC1-206ENST00000573989 SMC5Q8IY18 1101 aa15.54■□□□□ 0.08
TRAPPC1-206ENST00000573989 VEZTQ9HBM0 779 aa15.54■□□□□ 0.08
TRAPPC1-206ENST00000573989 ECHDC1Q9NTX5 307 aa15.54■□□□□ 0.08
TRAPPC1-206ENST00000573989 MYO5AQ9Y4I1 1855 aaKnown RBP15.54■□□□□ 0.08
TRAPPC1-206ENST00000573989 MAST2Q6P0Q8 1798 aa15.54■□□□□ 0.08
TRAPPC1-206ENST00000573989 TTC41PQ6P2S7 1318 aa15.53■□□□□ 0.08
TRAPPC1-206ENST00000573989 IGHDP01880 384 aa15.53■□□□□ 0.08
TRAPPC1-206ENST00000573989 TNNI2P48788 182 aa15.53■□□□□ 0.08
TRAPPC1-206ENST00000573989 MECOMQ03112 1051 aa15.53■□□□□ 0.08
TRAPPC1-206ENST00000573989 MAP3K12Q12852 859 aa15.53■□□□□ 0.08
TRAPPC1-206ENST00000573989 DIXDC1Q155Q3 683 aa15.53■□□□□ 0.08
TRAPPC1-206ENST00000573989 SPDYE2Q495Y8 402 aa15.53■□□□□ 0.08
TRAPPC1-206ENST00000573989 DNAJC2Q99543 621 aaKnown RBP15.53■□□□□ 0.08
TRAPPC1-206ENST00000573989 NOL10Q9BSC4 688 aaKnown RBP15.53■□□□□ 0.08
TRAPPC1-206ENST00000573989 DOCK2Q92608 1830 aa15.52■□□□□ 0.08
TRAPPC1-206ENST00000573989 ASTN2O75129 1339 aaPredicted RBP15.52■□□□□ 0.08
TRAPPC1-206ENST00000573989 IDH1O75874 414 aaKnown RBP15.52■□□□□ 0.08
TRAPPC1-206ENST00000573989 NF2P35240 595 aa15.52■□□□□ 0.08
TRAPPC1-206ENST00000573989 NAA16Q6N069 864 aaPredicted RBP15.52■□□□□ 0.08
TRAPPC1-206ENST00000573989 NSUN4Q96CB9 384 aaKnown RBP15.52■□□□□ 0.08
TRAPPC1-206ENST00000573989 FAM163AQ96GL9 167 aaPredicted RBP15.52■□□□□ 0.08
TRAPPC1-206ENST00000573989 BOLA2Q9H3K6 86 aa15.52■□□□□ 0.08
TRAPPC1-206ENST00000573989 TDRD3Q9H7E2 651 aaKnown RBP15.52■□□□□ 0.08
TRAPPC1-206ENST00000573989 ZNF70Q9UC06 446 aaPredicted RBP15.52■□□□□ 0.08
TRAPPC1-206ENST00000573989 DAGLAQ9Y4D2 1042 aa15.52■□□□□ 0.08
TRAPPC1-206ENST00000573989 PCDHAC2Q9Y5I4 1007 aa15.52■□□□□ 0.08
TRAPPC1-206ENST00000573989 PPP2R3BQ9Y5P8 575 aa15.52■□□□□ 0.08
TRAPPC1-206ENST00000573989 MROH7-TTC4A0A0A0MT08 1334 aa15.51■□□□□ 0.07
TRAPPC1-206ENST00000573989 CLRN2A0PK11 232 aa15.51■□□□□ 0.07
TRAPPC1-206ENST00000573989 TMEM88BA6NKF7 163 aa15.51■□□□□ 0.07
TRAPPC1-206ENST00000573989 ADM5C9JUS6 153 aa15.51■□□□□ 0.07
TRAPPC1-206ENST00000573989 MX1P20591 662 aa15.51■□□□□ 0.07
TRAPPC1-206ENST00000573989 B4GALNT3Q6L9W6 998 aa15.51■□□□□ 0.07
TRAPPC1-206ENST00000573989 APOBEC3HQ6NTF7 200 aaKnown RBP15.51■□□□□ 0.07
TRAPPC1-206ENST00000573989 HAUS7Q99871 368 aa15.51■□□□□ 0.07
TRAPPC1-206ENST00000573989 PAG1Q9NWQ8 432 aa15.51■□□□□ 0.07
TRAPPC1-206ENST00000573989 GAKO14976 1311 aa15.5■□□□□ 0.07
TRAPPC1-206ENST00000573989 GOLIM4O00461 696 aa15.5■□□□□ 0.07
TRAPPC1-206ENST00000573989 TRAF5O00463 557 aa15.5■□□□□ 0.07
TRAPPC1-206ENST00000573989 CELF2O95319 508 aaKnown RBP15.5■□□□□ 0.07
TRAPPC1-206ENST00000573989 BAG3O95817 575 aa15.5■□□□□ 0.07
TRAPPC1-206ENST00000573989 MAP4K4O95819 1239 aaPredicted RBP15.5■□□□□ 0.07
TRAPPC1-206ENST00000573989 FKBP1CQ5VVH2 108 aa15.5■□□□□ 0.07
TRAPPC1-206ENST00000573989 CHD1LQ86WJ1 897 aa15.5■□□□□ 0.07
TRAPPC1-206ENST00000573989 CERS3Q8IU89 383 aa15.5■□□□□ 0.07
TRAPPC1-206ENST00000573989 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.5■□□□□ 0.07
TRAPPC1-206ENST00000573989 DEFB129Q9H1M3 183 aa15.5■□□□□ 0.07
TRAPPC1-206ENST00000573989 PIH1D3Q9NQM4 214 aaKnown RBP15.5■□□□□ 0.07
TRAPPC1-206ENST00000573989 CREBZFQ9NS37 354 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms