RNA–Protein interactions for RNA: ENST00000573867.1

SCARF1-207, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-207ENST00000573867 SUGT1Q9Y2Z0 365 aa34.25■■■■□ 3.07
SCARF1-207ENST00000573867 PRDX5P30044 214 aa34.24■■■■□ 3.07
SCARF1-207ENST00000573867 RRP1P56182 461 aaKnown RBP34.23■■■■□ 3.07
SCARF1-207ENST00000573867 HDLBPQ00341 1268 aaKnown RBP34.23■■■■□ 3.07
SCARF1-207ENST00000573867 RPAP2Q8IXW5 612 aaPredicted RBP34.23■■■■□ 3.07
SCARF1-207ENST00000573867 TDRD3Q9H7E2 651 aaKnown RBP34.23■■■■□ 3.07
SCARF1-207ENST00000573867 SALL1Q9NSC2 1324 aa34.23■■■■□ 3.07
SCARF1-207ENST00000573867 CAPNS2Q96L46 248 aa34.22■■■■□ 3.07
SCARF1-207ENST00000573867 DBNDD2Q9BQY9 259 aa34.22■■■■□ 3.07
SCARF1-207ENST00000573867 WDR33Q9C0J8 1336 aaKnown RBP34.22■■■■□ 3.07
SCARF1-207ENST00000573867 HUNKP57058 714 aa34.21■■■■□ 3.07
SCARF1-207ENST00000573867 SPDYE2Q495Y8 402 aa34.21■■■■□ 3.07
SCARF1-207ENST00000573867 PI16Q6UXB8 463 aa34.21■■■■□ 3.07
SCARF1-207ENST00000573867 C2orf69Q8N8R5 385 aa34.21■■■■□ 3.07
SCARF1-207ENST00000573867 DEFB129Q9H1M3 183 aa34.21■■■■□ 3.07
SCARF1-207ENST00000573867 VEZTQ9HBM0 779 aa34.21■■■■□ 3.07
SCARF1-207ENST00000573867 ZNF70Q9UC06 446 aaPredicted RBP34.21■■■■□ 3.07
SCARF1-207ENST00000573867 MYO1BO43795 1136 aa34.2■■■■□ 3.07
SCARF1-207ENST00000573867 PAXIP1Q6ZW49 1069 aaPredicted RBP34.2■■■■□ 3.07
SCARF1-207ENST00000573867 TEKT1Q969V4 418 aa34.2■■■■□ 3.07
SCARF1-207ENST00000573867 HHIPL1Q96JK4 782 aa34.2■■■■□ 3.07
SCARF1-207ENST00000573867 CHMP4BQ9H444 224 aaKnown RBP34.2■■■■□ 3.07
SCARF1-207ENST00000573867 PDS5AQ29RF7 1337 aaKnown RBP34.2■■■■□ 3.07
SCARF1-207ENST00000573867 ARID4AP29374 1257 aaPredicted RBP34.19■■■■□ 3.06
SCARF1-207ENST00000573867 MOB2Q70IA6 237 aa34.19■■■■□ 3.06
SCARF1-207ENST00000573867 ZDHHC15Q96MV8 337 aa34.19■■■■□ 3.06
SCARF1-207ENST00000573867 MRIQ9BWK5 157 aa34.19■■■■□ 3.06
SCARF1-207ENST00000573867 TLR7Q9NYK1 1049 aaKnown RBP34.19■■■■□ 3.06
SCARF1-207ENST00000573867 HMG20BQ9P0W2 317 aa34.19■■■■□ 3.06
SCARF1-207ENST00000573867 THSD7BQ9C0I4 1608 aa34.19■■■■□ 3.06
SCARF1-207ENST00000573867 DIXDC1Q155Q3 683 aa34.18■■■■□ 3.06
SCARF1-207ENST00000573867 GORABQ5T7V8 394 aa34.18■■■■□ 3.06
SCARF1-207ENST00000573867 APOBEC3HQ6NTF7 200 aaKnown RBP34.18■■■■□ 3.06
SCARF1-207ENST00000573867 EAF2Q96CJ1 260 aaPredicted RBP34.18■■■■□ 3.06
SCARF1-207ENST00000573867 MAST3O60307 1309 aa34.18■■■■□ 3.06
SCARF1-207ENST00000573867 PAPPA2Q9BXP8 1791 aa34.18■■■■□ 3.06
SCARF1-207ENST00000573867 SSC5DA1L4H1 1573 aa34.17■■■■□ 3.06
SCARF1-207ENST00000573867 GRM1Q13255 1194 aa34.17■■■■□ 3.06
SCARF1-207ENST00000573867 DBNLQ9UJU6 430 aaKnown RBP34.17■■■■□ 3.06
SCARF1-207ENST00000573867 LDHBP07195 334 aaKnown RBP34.16■■■■□ 3.06
SCARF1-207ENST00000573867 MCAMP43121 646 aa34.16■■■■□ 3.06
SCARF1-207ENST00000573867 HHIPL2Q6UWX4 724 aa34.16■■■■□ 3.06
SCARF1-207ENST00000573867 AOC2O75106 756 aa34.15■■■■□ 3.06
SCARF1-207ENST00000573867 CCDC8Q9H0W5 538 aaPredicted RBP34.15■■■■□ 3.06
SCARF1-207ENST00000573867 ECE1P42892 770 aa34.14■■■■□ 3.06
SCARF1-207ENST00000573867 RASA3Q14644 834 aa34.14■■■■□ 3.06
SCARF1-207ENST00000573867 SPATA5Q8NB90 893 aa34.14■■■■□ 3.06
SCARF1-207ENST00000573867 DAGLAQ9Y4D2 1042 aa34.14■■■■□ 3.06
SCARF1-207ENST00000573867 HMMRO75330 724 aa34.13■■■■□ 3.05
SCARF1-207ENST00000573867 HSPA1AP0DMV8 641 aaKnown RBP34.13■■■■□ 3.05
SCARF1-207ENST00000573867 HSPA1BP0DMV9 641 aaKnown RBP34.13■■■■□ 3.05
SCARF1-207ENST00000573867 CACNB3P54284 484 aa34.13■■■■□ 3.05
SCARF1-207ENST00000573867 FZD1Q9UP38 647 aa34.13■■■■□ 3.05
SCARF1-207ENST00000573867 PPP2R3BQ9Y5P8 575 aa34.13■■■■□ 3.05
SCARF1-207ENST00000573867 ERC1Q8IUD2 1116 aa34.12■■■■□ 3.05
SCARF1-207ENST00000573867 CDAN1Q8IWY9 1227 aa34.12■■■■□ 3.05
SCARF1-207ENST00000573867 RHPN1Q8TCX5 695 aa34.12■■■■□ 3.05
SCARF1-207ENST00000573867 IL1RAPL2Q9NP60 686 aa34.12■■■■□ 3.05
SCARF1-207ENST00000573867 ABCF2Q9UG63 623 aa34.12■■■■□ 3.05
SCARF1-207ENST00000573867 TCP10L2B9ZVM9 353 aa34.11■■■■□ 3.05
SCARF1-207ENST00000573867 UBE2Q2LH0YL09 131 aa34.11■■■■□ 3.05
SCARF1-207ENST00000573867 UQCRFS1P1P0C7P4 283 aa34.11■■■■□ 3.05
SCARF1-207ENST00000573867 FKBP1BP68106 108 aa34.11■■■■□ 3.05
SCARF1-207ENST00000573867 RGMBQ6NW40 437 aa34.11■■■■□ 3.05
SCARF1-207ENST00000573867 TBC1D9Q6ZT07 1266 aa34.11■■■■□ 3.05
SCARF1-207ENST00000573867 ZGPATQ8N5A5 531 aaKnown RBP34.11■■■■□ 3.05
SCARF1-207ENST00000573867 FAM155AB1AL88 458 aaPredicted RBP34.1■■■■□ 3.05
SCARF1-207ENST00000573867 APBB1O00213 710 aa34.1■■■■□ 3.05
SCARF1-207ENST00000573867 HSP90AB4PQ58FF6 505 aa34.1■■■■□ 3.05
SCARF1-207ENST00000573867 TTC39AQ5SRH9 613 aa34.1■■■■□ 3.05
SCARF1-207ENST00000573867 NBPF12Q5TAG4 269 aaPredicted RBP34.1■■■■□ 3.05
SCARF1-207ENST00000573867 ZNF384Q8TF68 577 aa34.1■■■■□ 3.05
SCARF1-207ENST00000573867 ZIC5Q96T25 663 aa34.1■■■■□ 3.05
SCARF1-207ENST00000573867 PRKG1Q13976 671 aa34.09■■■■□ 3.05
SCARF1-207ENST00000573867 TEPSINQ96N21 525 aa34.09■■■■□ 3.05
SCARF1-207ENST00000573867 SNRKQ9NRH2 765 aa34.09■■■■□ 3.05
SCARF1-207ENST00000573867 NF2P35240 595 aa34.08■■■■□ 3.05
SCARF1-207ENST00000573867 CCDC158Q5M9N0 1113 aa34.08■■■■□ 3.05
SCARF1-207ENST00000573867 AACSQ86V21 672 aa34.08■■■■□ 3.05
SCARF1-207ENST00000573867 AKAP11Q9UKA4 1901 aa34.08■■■■□ 3.05
SCARF1-207ENST00000573867 TMEM39BQ9GZU3 492 aa34.07■■■■□ 3.04
SCARF1-207ENST00000573867 GAKO14976 1311 aa34.06■■■■□ 3.04
SCARF1-207ENST00000573867 ZNF157P51786 506 aaPredicted RBP34.06■■■■□ 3.04
SCARF1-207ENST00000573867 TNFAIP1Q13829 316 aa34.06■■■■□ 3.04
SCARF1-207ENST00000573867 TTLL12Q14166 644 aaPredicted RBP34.06■■■■□ 3.04
SCARF1-207ENST00000573867 CDC42EP5Q6NZY7 148 aa34.06■■■■□ 3.04
SCARF1-207ENST00000573867 KIF1BPQ96EK5 621 aa34.06■■■■□ 3.04
SCARF1-207ENST00000573867 ZNF512BQ96KM6 892 aaPredicted RBP34.06■■■■□ 3.04
SCARF1-207ENST00000573867 CRBNQ96SW2 442 aa34.06■■■■□ 3.04
SCARF1-207ENST00000573867 WBP1LQ9NX94 342 aa34.06■■■■□ 3.04
SCARF1-207ENST00000573867 MECOMQ03112 1051 aa34.05■■■■□ 3.04
SCARF1-207ENST00000573867 DZIP1Q86YF9 867 aaKnown RBP34.05■■■■□ 3.04
SCARF1-207ENST00000573867 SPTY2D1Q68D10 685 aaPredicted RBP34.04■■■■□ 3.04
SCARF1-207ENST00000573867 ERICH6Q7L0X2 663 aa34.04■■■■□ 3.04
SCARF1-207ENST00000573867 PCDHB15Q9Y5E8 787 aa34.04■■■■□ 3.04
SCARF1-207ENST00000573867 MYH2Q9UKX2 1941 aa34.03■■■■□ 3.04
SCARF1-207ENST00000573867 RAB11FIP3O75154 756 aa34.03■■■■□ 3.04
SCARF1-207ENST00000573867 SLC10A3P09131 477 aa34.03■■■■□ 3.04
SCARF1-207ENST00000573867 MAP2K2P36507 400 aa34.03■■■■□ 3.04
SCARF1-207ENST00000573867 RASAL3Q86YV0 1011 aa34.03■■■■□ 3.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms