RNA–Protein interactions for RNA: ENST00000573474.5

CCDC40-209, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 554 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-209ENST00000573474 KCNB2Q92953 911 aa16.39■□□□□ 0.21
CCDC40-209ENST00000573474 IL17RAQ96F46 866 aa16.39■□□□□ 0.21
CCDC40-209ENST00000573474 MYO5AQ9Y4I1 1855 aaKnown RBP16.38■□□□□ 0.21
CCDC40-209ENST00000573474 PPIP5K2O43314 1243 aa16.38■□□□□ 0.21
CCDC40-209ENST00000573474 MFSD14BQ5SR56 506 aa16.38■□□□□ 0.21
CCDC40-209ENST00000573474 TTLL5Q6EMB2 1281 aa16.38■□□□□ 0.21
CCDC40-209ENST00000573474 DZIP1Q86YF9 867 aaKnown RBP16.38■□□□□ 0.21
CCDC40-209ENST00000573474 STRBPQ96SI9 672 aaKnown RBP16.38■□□□□ 0.21
CCDC40-209ENST00000573474 DBNDD1Q9H9R9 158 aa16.38■□□□□ 0.21
CCDC40-209ENST00000573474 BCS1LQ9Y276 419 aa16.38■□□□□ 0.21
CCDC40-209ENST00000573474 SUGT1Q9Y2Z0 365 aa16.38■□□□□ 0.21
CCDC40-209ENST00000573474 MAGEB6P1A0A0J9YX57 407 aa16.37■□□□□ 0.21
CCDC40-209ENST00000573474 ECE2O60344 883 aa16.37■□□□□ 0.21
CCDC40-209ENST00000573474 MBD4O95243 580 aa16.37■□□□□ 0.21
CCDC40-209ENST00000573474 LDHCP07864 332 aa16.37■□□□□ 0.21
CCDC40-209ENST00000573474 GNAT2P19087 354 aa16.37■□□□□ 0.21
CCDC40-209ENST00000573474 RABEP1Q15276 862 aa16.37■□□□□ 0.21
CCDC40-209ENST00000573474 VPS53Q5VIR6 699 aa16.37■□□□□ 0.21
CCDC40-209ENST00000573474 RNF20Q5VTR2 975 aa16.37■□□□□ 0.21
CCDC40-209ENST00000573474 CREB3L3Q68CJ9 461 aa16.37■□□□□ 0.21
CCDC40-209ENST00000573474 NLGN2Q8NFZ4 835 aa16.37■□□□□ 0.21
CCDC40-209ENST00000573474 ZNF384Q8TF68 577 aa16.37■□□□□ 0.21
CCDC40-209ENST00000573474 CTNNA3Q9UI47 895 aa16.37■□□□□ 0.21
CCDC40-209ENST00000573474 PALD1Q9ULE6 856 aa16.37■□□□□ 0.21
CCDC40-209ENST00000573474 SLC27A2O14975 620 aa16.36■□□□□ 0.21
CCDC40-209ENST00000573474 ZKSCAN1P17029 563 aaPredicted RBP16.36■□□□□ 0.21
CCDC40-209ENST00000573474 STRIP1Q5VSL9 837 aa16.36■□□□□ 0.21
CCDC40-209ENST00000573474 ADGRA1Q86SQ6 560 aa16.36■□□□□ 0.21
CCDC40-209ENST00000573474 SLF2Q8IX21 1173 aa16.36■□□□□ 0.21
CCDC40-209ENST00000573474 FBXW7Q969H0 707 aa16.36■□□□□ 0.21
CCDC40-209ENST00000573474 ARMT1Q9H993 441 aa16.36■□□□□ 0.21
CCDC40-209ENST00000573474 ZNF277Q9NRM2 450 aaPredicted RBP16.36■□□□□ 0.21
CCDC40-209ENST00000573474 SNX14Q9Y5W7 946 aa16.36■□□□□ 0.21
CCDC40-209ENST00000573474 BRCA1P38398 1863 aaKnown RBP16.35■□□□□ 0.21
CCDC40-209ENST00000573474 USP17L3A6NCW0 530 aa16.35■□□□□ 0.21
CCDC40-209ENST00000573474 USP17L4A6NCW7 530 aa16.35■□□□□ 0.21
CCDC40-209ENST00000573474 PATL2C9JE40 543 aaKnown RBP16.35■□□□□ 0.21
CCDC40-209ENST00000573474 FKBP1AP62942 108 aaKnown RBP16.35■□□□□ 0.21
CCDC40-209ENST00000573474 GRIK5Q16478 980 aa16.35■□□□□ 0.21
CCDC40-209ENST00000573474 TSGA10IPQ3SY00 556 aa16.35■□□□□ 0.21
CCDC40-209ENST00000573474 USP17L1Q7RTZ2 530 aa16.35■□□□□ 0.21
CCDC40-209ENST00000573474 RASEFQ8IZ41 740 aa16.35■□□□□ 0.21
CCDC40-209ENST00000573474 LARGE2Q8N3Y3 721 aa16.35■□□□□ 0.21
CCDC40-209ENST00000573474 MIGA1Q8NAN2 632 aa16.35■□□□□ 0.21
CCDC40-209ENST00000573474 IPO9Q96P70 1041 aaKnown RBP16.35■□□□□ 0.21
CCDC40-209ENST00000573474 FHDC1Q9C0D6 1143 aaPredicted RBP16.35■□□□□ 0.21
CCDC40-209ENST00000573474 TAOK3Q9H2K8 898 aa16.35■□□□□ 0.21
CCDC40-209ENST00000573474 IARSP41252 1262 aaKnown RBP16.34■□□□□ 0.21
CCDC40-209ENST00000573474 ALX1Q15699 326 aa16.34■□□□□ 0.21
CCDC40-209ENST00000573474 LCORLQ8N3X6 602 aa16.34■□□□□ 0.21
CCDC40-209ENST00000573474 IL27Q8NEV9 243 aa16.34■□□□□ 0.21
CCDC40-209ENST00000573474 RIOK1Q9BRS2 568 aaKnown RBP16.34■□□□□ 0.21
CCDC40-209ENST00000573474 RPAP1Q9BWH6 1393 aaPredicted RBP16.34■□□□□ 0.21
CCDC40-209ENST00000573474 FOXP2O15409 715 aa16.33■□□□□ 0.2
CCDC40-209ENST00000573474 FGAP02671 866 aa16.33■□□□□ 0.2
CCDC40-209ENST00000573474 APPP05067 770 aa16.33■□□□□ 0.2
CCDC40-209ENST00000573474 BECN1Q14457 450 aa16.33■□□□□ 0.2
CCDC40-209ENST00000573474 FAM163AQ96GL9 167 aaPredicted RBP16.33■□□□□ 0.2
CCDC40-209ENST00000573474 KCNQ5Q9NR82 932 aa16.33■□□□□ 0.2
CCDC40-209ENST00000573474 SLC4A4Q9Y6R1 1079 aa16.33■□□□□ 0.2
CCDC40-209ENST00000573474 LTBP3Q9NS15 1303 aa16.33■□□□□ 0.2
CCDC40-209ENST00000573474 MAST2Q6P0Q8 1798 aa16.33■□□□□ 0.2
CCDC40-209ENST00000573474 MROH7-TTC4A0A0A0MT08 1334 aa16.32■□□□□ 0.2
CCDC40-209ENST00000573474 GSG1L2A8MUP6 293 aa16.32■□□□□ 0.2
CCDC40-209ENST00000573474 BAG3O95817 575 aa16.32■□□□□ 0.2
CCDC40-209ENST00000573474 PPP4CP60510 307 aa16.32■□□□□ 0.2
CCDC40-209ENST00000573474 DYNLL1P63167 89 aaKnown RBP16.32■□□□□ 0.2
CCDC40-209ENST00000573474 KRT32Q14532 448 aa16.32■□□□□ 0.2
CCDC40-209ENST00000573474 CHD4Q14839 1912 aa16.32■□□□□ 0.2
CCDC40-209ENST00000573474 DACT2Q5SW24 774 aa16.32■□□□□ 0.2
CCDC40-209ENST00000573474 CERS3Q8IU89 383 aa16.32■□□□□ 0.2
CCDC40-209ENST00000573474 CERS5Q8N5B7 392 aa16.32■□□□□ 0.2
CCDC40-209ENST00000573474 SNX21Q969T3 373 aa16.32■□□□□ 0.2
CCDC40-209ENST00000573474 NOL10Q9BSC4 688 aaKnown RBP16.32■□□□□ 0.2
CCDC40-209ENST00000573474 NACAP1Q9BZK3 213 aa16.32■□□□□ 0.2
CCDC40-209ENST00000573474 TM6SF1Q9BZW5 370 aa16.32■□□□□ 0.2
CCDC40-209ENST00000573474 CCDC88AQ3V6T2 1871 aa16.31■□□□□ 0.2
CCDC40-209ENST00000573474 ZMYM6O95789 1325 aa16.31■□□□□ 0.2
CCDC40-209ENST00000573474 YDJCA8MPS7 323 aa16.31■□□□□ 0.2
CCDC40-209ENST00000573474 NFKBIEO00221 500 aa16.31■□□□□ 0.2
CCDC40-209ENST00000573474 CYP21A2P08686 494 aa16.31■□□□□ 0.2
CCDC40-209ENST00000573474 PSMA5P28066 241 aa16.31■□□□□ 0.2
CCDC40-209ENST00000573474 DIXDC1Q155Q3 683 aa16.31■□□□□ 0.2
CCDC40-209ENST00000573474 IMMTQ16891 758 aaKnown RBP16.31■□□□□ 0.2
CCDC40-209ENST00000573474 NIM1KQ8IY84 436 aa16.31■□□□□ 0.2
CCDC40-209ENST00000573474 IFNL3Q8IZI9 196 aa16.31■□□□□ 0.2
CCDC40-209ENST00000573474 MXD3Q9BW11 206 aa16.31■□□□□ 0.2
CCDC40-209ENST00000573474 MRIQ9BWK5 157 aa16.31■□□□□ 0.2
CCDC40-209ENST00000573474 CRNKL1Q9BZJ0 848 aaKnown RBP16.31■□□□□ 0.2
CCDC40-209ENST00000573474 AATFQ9NY61 560 aaKnown RBP eCLIP16.31■□□□□ 0.2
CCDC40-209ENST00000573474 ZNRF3Q9ULT6 936 aa16.31■□□□□ 0.2
CCDC40-209ENST00000573474 GAKO14976 1311 aa16.3■□□□□ 0.2
CCDC40-209ENST00000573474 GPR75-ASB3A0A0A6YYF3 556 aa16.3■□□□□ 0.2
CCDC40-209ENST00000573474 PRKAB2O43741 272 aa16.3■□□□□ 0.2
CCDC40-209ENST00000573474 ST18O60284 1047 aa16.3■□□□□ 0.2
CCDC40-209ENST00000573474 GIMAP6Q6P9H5 292 aa16.3■□□□□ 0.2
CCDC40-209ENST00000573474 JAKMIP1Q96N16 626 aaKnown RBP16.3■□□□□ 0.2
CCDC40-209ENST00000573474 SYT17Q9BSW7 474 aa16.3■□□□□ 0.2
CCDC40-209ENST00000573474 TTF2Q9UNY4 1162 aaKnown RBP16.3■□□□□ 0.2
CCDC40-209ENST00000573474 FER1L6Q2WGJ9 1857 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms