RNA–Protein interactions for RNA: ENST00000573395.1

RAB40B-208, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 517 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-208ENST00000573395 ATG9AQ7Z3C6 839 aa20.27■□□□□ 0.84
RAB40B-208ENST00000573395 TEKT1Q969V4 418 aa20.27■□□□□ 0.84
RAB40B-208ENST00000573395 SLC10A4Q96EP9 437 aa20.27■□□□□ 0.84
RAB40B-208ENST00000573395 GNL3LQ9NVN8 582 aaKnown RBP20.27■□□□□ 0.84
RAB40B-208ENST00000573395 MAST3O60307 1309 aa20.27■□□□□ 0.83
RAB40B-208ENST00000573395 IL15P40933 162 aaPredicted RBP20.26■□□□□ 0.83
RAB40B-208ENST00000573395 SREBF2Q12772 1141 aa20.26■□□□□ 0.83
RAB40B-208ENST00000573395 DGKZQ13574 1117 aa20.26■□□□□ 0.83
RAB40B-208ENST00000573395 FZD1Q9UP38 647 aa20.26■□□□□ 0.83
RAB40B-208ENST00000573395 AOX1Q06278 1338 aa20.26■□□□□ 0.83
RAB40B-208ENST00000573395 TCP10L2B9ZVM9 353 aa20.25■□□□□ 0.83
RAB40B-208ENST00000573395 BCAR3O75815 825 aa20.25■□□□□ 0.83
RAB40B-208ENST00000573395 IREB2P48200 963 aaKnown RBP20.25■□□□□ 0.83
RAB40B-208ENST00000573395 HDLBPQ00341 1268 aaKnown RBP20.25■□□□□ 0.83
RAB40B-208ENST00000573395 LDLRAD1Q5T700 205 aa20.25■□□□□ 0.83
RAB40B-208ENST00000573395 NBPF12Q5TAG4 269 aaPredicted RBP20.25■□□□□ 0.83
RAB40B-208ENST00000573395 ATF7IPQ6VMQ6 1270 aa20.25■□□□□ 0.83
RAB40B-208ENST00000573395 WDR66Q8TBY9 1149 aa20.25■□□□□ 0.83
RAB40B-208ENST00000573395 TMOD2Q9NZR1 351 aa20.25■□□□□ 0.83
RAB40B-208ENST00000573395 PA2G4Q9UQ80 394 aaKnown RBP20.25■□□□□ 0.83
RAB40B-208ENST00000573395 SUGT1Q9Y2Z0 365 aa20.25■□□□□ 0.83
RAB40B-208ENST00000573395 TRIM27P14373 513 aa20.24■□□□□ 0.83
RAB40B-208ENST00000573395 GRIK5Q16478 980 aa20.24■□□□□ 0.83
RAB40B-208ENST00000573395 CLUAP1Q96AJ1 413 aa20.24■□□□□ 0.83
RAB40B-208ENST00000573395 ECM29Q5VYK3 1845 aa20.24■□□□□ 0.83
RAB40B-208ENST00000573395 CCDC85CA6NKD9 419 aa20.23■□□□□ 0.83
RAB40B-208ENST00000573395 SRGAP3O43295 1099 aa20.23■□□□□ 0.83
RAB40B-208ENST00000573395 MAP3K11Q16584 847 aa20.23■□□□□ 0.83
RAB40B-208ENST00000573395 SPRYD7Q5W111 196 aa20.23■□□□□ 0.83
RAB40B-208ENST00000573395 MCOLN1Q9GZU1 580 aa20.23■□□□□ 0.83
RAB40B-208ENST00000573395 COPRSQ9NQ92 184 aa20.23■□□□□ 0.83
RAB40B-208ENST00000573395 ARAP2Q8WZ64 1704 aa20.22■□□□□ 0.83
RAB40B-208ENST00000573395 AKAP11Q9UKA4 1901 aa20.22■□□□□ 0.83
RAB40B-208ENST00000573395 UNCXA6NJT0 531 aa20.21■□□□□ 0.83
RAB40B-208ENST00000573395 GNAI2P04899 355 aa20.21■□□□□ 0.83
RAB40B-208ENST00000573395 TM4SF4P48230 202 aa20.21■□□□□ 0.83
RAB40B-208ENST00000573395 ZKSCAN2Q63HK3 967 aa20.21■□□□□ 0.83
RAB40B-208ENST00000573395 ANKRD13AQ8IZ07 590 aa20.21■□□□□ 0.83
RAB40B-208ENST00000573395 CLMNQ96JQ2 1002 aa20.21■□□□□ 0.83
RAB40B-208ENST00000573395 ZDHHC15Q96MV8 337 aa20.21■□□□□ 0.83
RAB40B-208ENST00000573395 MRIQ9BWK5 157 aa20.21■□□□□ 0.83
RAB40B-208ENST00000573395 CASP8AP2Q9UKL3 1982 aa20.21■□□□□ 0.83
RAB40B-208ENST00000573395 SSC5DA1L4H1 1573 aa20.21■□□□□ 0.83
RAB40B-208ENST00000573395 MANSC4A6NHS7 340 aaPredicted RBP20.2■□□□□ 0.82
RAB40B-208ENST00000573395 TBC1D8O95759 1140 aa20.2■□□□□ 0.82
RAB40B-208ENST00000573395 TMEM39BQ9GZU3 492 aa20.2■□□□□ 0.82
RAB40B-208ENST00000573395 USP2O75604 605 aaPredicted RBP20.19■□□□□ 0.82
RAB40B-208ENST00000573395 ZBTB48P10074 688 aaPredicted RBP20.19■□□□□ 0.82
RAB40B-208ENST00000573395 CACNB3P54284 484 aa20.19■□□□□ 0.82
RAB40B-208ENST00000573395 HHIPL2Q6UWX4 724 aa20.19■□□□□ 0.82
RAB40B-208ENST00000573395 WNK4Q96J92 1243 aa20.19■□□□□ 0.82
RAB40B-208ENST00000573395 DENND2AQ9ULE3 1009 aa20.19■□□□□ 0.82
RAB40B-208ENST00000573395 TNNQ9UQP3 1299 aa20.19■□□□□ 0.82
RAB40B-208ENST00000573395 AKAP2Q9Y2D5 859 aa20.19■□□□□ 0.82
RAB40B-208ENST00000573395 SEMA3EO15041 775 aa20.18■□□□□ 0.82
RAB40B-208ENST00000573395 LDHBP07195 334 aaKnown RBP20.18■□□□□ 0.82
RAB40B-208ENST00000573395 INHBEP58166 350 aa20.18■□□□□ 0.82
RAB40B-208ENST00000573395 MTX1Q13505 466 aa20.18■□□□□ 0.82
RAB40B-208ENST00000573395 FTSJ3Q8IY81 847 aaKnown RBP20.18■□□□□ 0.82
RAB40B-208ENST00000573395 HOOK2Q96ED9 719 aa20.18■□□□□ 0.82
RAB40B-208ENST00000573395 ALDH1A1P00352 501 aa20.17■□□□□ 0.82
RAB40B-208ENST00000573395 PHKA1P46020 1223 aa20.17■□□□□ 0.82
RAB40B-208ENST00000573395 TFCP2Q12800 502 aa20.16■□□□□ 0.82
RAB40B-208ENST00000573395 GORABQ5T7V8 394 aa20.16■□□□□ 0.82
RAB40B-208ENST00000573395 CCDC102BQ68D86 513 aa20.16■□□□□ 0.82
RAB40B-208ENST00000573395 APOBEC3HQ6NTF7 200 aaKnown RBP20.16■□□□□ 0.82
RAB40B-208ENST00000573395 CTU1Q7Z7A3 348 aaKnown RBP20.16■□□□□ 0.82
RAB40B-208ENST00000573395 ZGPATQ8N5A5 531 aaKnown RBP20.16■□□□□ 0.82
RAB40B-208ENST00000573395 TMEM57Q8N5G2 664 aa20.16■□□□□ 0.82
RAB40B-208ENST00000573395 TEPSINQ96N21 525 aa20.16■□□□□ 0.82
RAB40B-208ENST00000573395 ELP3Q9H9T3 547 aa20.16■□□□□ 0.82
RAB40B-208ENST00000573395 CSADQ9Y600 493 aa20.16■□□□□ 0.82
RAB40B-208ENST00000573395 PRDX5P30044 214 aa20.15■□□□□ 0.82
RAB40B-208ENST00000573395 ADORA1P30542 326 aa20.15■□□□□ 0.82
RAB40B-208ENST00000573395 TIMM10P62072 90 aa20.15■□□□□ 0.82
RAB40B-208ENST00000573395 G3BP1Q13283 466 aaKnown RBP eCLIP20.15■□□□□ 0.82
RAB40B-208ENST00000573395 MVPQ14764 893 aaKnown RBP20.15■□□□□ 0.82
RAB40B-208ENST00000573395 FKBP1CQ5VVH2 108 aa20.15■□□□□ 0.82
RAB40B-208ENST00000573395 OTUD7BQ6GQQ9 843 aa20.15■□□□□ 0.82
RAB40B-208ENST00000573395 FAM83AQ86UY5 434 aa20.15■□□□□ 0.82
RAB40B-208ENST00000573395 CDAN1Q8IWY9 1227 aa20.15■□□□□ 0.82
RAB40B-208ENST00000573395 NEUROD6Q96NK8 337 aa20.15■□□□□ 0.82
RAB40B-208ENST00000573395 A0A1B0GUL7 405 aa20.14■□□□□ 0.81
RAB40B-208ENST00000573395 GPR25O00155 361 aa20.14■□□□□ 0.81
RAB40B-208ENST00000573395 MAP3K9P80192 1104 aa20.14■□□□□ 0.81
RAB40B-208ENST00000573395 DIXDC1Q155Q3 683 aa20.14■□□□□ 0.81
RAB40B-208ENST00000573395 ZNF296Q8WUU4 475 aaPredicted RBP20.14■□□□□ 0.81
RAB40B-208ENST00000573395 MYH13Q9UKX3 1938 aa20.14■□□□□ 0.81
RAB40B-208ENST00000573395 ZBED9Q6R2W3 1325 aa20.13■□□□□ 0.81
RAB40B-208ENST00000573395 SALL1Q9NSC2 1324 aa20.13■□□□□ 0.81
RAB40B-208ENST00000573395 IFNL1Q8IU54 200 aa20.13■□□□□ 0.81
RAB40B-208ENST00000573395 ITPRIPQ8IWB1 547 aa20.13■□□□□ 0.81
RAB40B-208ENST00000573395 OPTNQ96CV9 577 aa20.13■□□□□ 0.81
RAB40B-208ENST00000573395 XAGE2Q96GT9 111 aa20.13■□□□□ 0.81
RAB40B-208ENST00000573395 ABCF2Q9UG63 623 aa20.13■□□□□ 0.81
RAB40B-208ENST00000573395 DAGLAQ9Y4D2 1042 aa20.13■□□□□ 0.81
RAB40B-208ENST00000573395 OS9Q13438 667 aaPredicted RBP20.12■□□□□ 0.81
RAB40B-208ENST00000573395 DCAF15Q66K64 600 aa20.12■□□□□ 0.81
RAB40B-208ENST00000573395 SPTY2D1Q68D10 685 aaPredicted RBP20.12■□□□□ 0.81
RAB40B-208ENST00000573395 DZIP1Q86YF9 867 aaKnown RBP20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms