RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 CEP126Q9P2H0 1117 aa12.02□□□□□ -0.49
NPLOC4-212ENST00000573328 MAST3O60307 1309 aa12.02□□□□□ -0.49
NPLOC4-212ENST00000573328 AOX1Q06278 1338 aa12.02□□□□□ -0.49
NPLOC4-212ENST00000573328 TCP10L2B9ZVM9 353 aa12.01□□□□□ -0.49
NPLOC4-212ENST00000573328 FGFR2P21802 821 aa12.01□□□□□ -0.49
NPLOC4-212ENST00000573328 TNNI2P48788 182 aa12.01□□□□□ -0.49
NPLOC4-212ENST00000573328 SREBF2Q12772 1141 aa12.01□□□□□ -0.49
NPLOC4-212ENST00000573328 DGKZQ13574 1117 aa12.01□□□□□ -0.49
NPLOC4-212ENST00000573328 RASA3Q14644 834 aa12.01□□□□□ -0.49
NPLOC4-212ENST00000573328 ATP2B3Q16720 1220 aa12.01□□□□□ -0.49
NPLOC4-212ENST00000573328 SPDYE2Q495Y8 402 aa12.01□□□□□ -0.49
NPLOC4-212ENST00000573328 ATG9AQ7Z3C6 839 aa12.01□□□□□ -0.49
NPLOC4-212ENST00000573328 ARHGAP45Q92619 1136 aa12.01□□□□□ -0.49
NPLOC4-212ENST00000573328 TEKT1Q969V4 418 aa12.01□□□□□ -0.49
NPLOC4-212ENST00000573328 CLUAP1Q96AJ1 413 aa12.01□□□□□ -0.49
NPLOC4-212ENST00000573328 TMOD2Q9NZR1 351 aa12.01□□□□□ -0.49
NPLOC4-212ENST00000573328 ZNF70Q9UC06 446 aaPredicted RBP12.01□□□□□ -0.49
NPLOC4-212ENST00000573328 FBXO3Q9UK99 471 aa12.01□□□□□ -0.49
NPLOC4-212ENST00000573328 PA2G4Q9UQ80 394 aaKnown RBP12.01□□□□□ -0.49
NPLOC4-212ENST00000573328 CCDC85CA6NKD9 419 aa12□□□□□ -0.49
NPLOC4-212ENST00000573328 BCAR3O75815 825 aa12□□□□□ -0.49
NPLOC4-212ENST00000573328 CIAO1O76071 339 aa12□□□□□ -0.49
NPLOC4-212ENST00000573328 TRIM27P14373 513 aa12□□□□□ -0.49
NPLOC4-212ENST00000573328 IL15P40933 162 aaPredicted RBP12□□□□□ -0.49
NPLOC4-212ENST00000573328 IREB2P48200 963 aaKnown RBP12□□□□□ -0.49
NPLOC4-212ENST00000573328 GRIK5Q16478 980 aa12□□□□□ -0.49
NPLOC4-212ENST00000573328 NBPF12Q5TAG4 269 aaPredicted RBP12□□□□□ -0.49
NPLOC4-212ENST00000573328 INTS3Q68E01 1043 aaKnown RBP12□□□□□ -0.49
NPLOC4-212ENST00000573328 ATF7IPQ6VMQ6 1270 aa12□□□□□ -0.49
NPLOC4-212ENST00000573328 SLC10A4Q96EP9 437 aa12□□□□□ -0.49
NPLOC4-212ENST00000573328 MCOLN1Q9GZU1 580 aa12□□□□□ -0.49
NPLOC4-212ENST00000573328 GNL3LQ9NVN8 582 aaKnown RBP12□□□□□ -0.49
NPLOC4-212ENST00000573328 SRGAP3O43295 1099 aa11.99□□□□□ -0.49
NPLOC4-212ENST00000573328 DOCK2Q92608 1830 aa11.99□□□□□ -0.49
NPLOC4-212ENST00000573328 CACNB3P54284 484 aa11.98□□□□□ -0.49
NPLOC4-212ENST00000573328 HDLBPQ00341 1268 aaKnown RBP11.98□□□□□ -0.49
NPLOC4-212ENST00000573328 LDLRAD1Q5T700 205 aa11.98□□□□□ -0.49
NPLOC4-212ENST00000573328 ZKSCAN2Q63HK3 967 aa11.98□□□□□ -0.49
NPLOC4-212ENST00000573328 WDR66Q8TBY9 1149 aa11.98□□□□□ -0.49
NPLOC4-212ENST00000573328 CLMNQ96JQ2 1002 aa11.98□□□□□ -0.49
NPLOC4-212ENST00000573328 TMEM39BQ9GZU3 492 aa11.98□□□□□ -0.49
NPLOC4-212ENST00000573328 TNNQ9UQP3 1299 aa11.98□□□□□ -0.49
NPLOC4-212ENST00000573328 TBC1D8O95759 1140 aa11.97□□□□□ -0.49
NPLOC4-212ENST00000573328 GNAI2P04899 355 aa11.97□□□□□ -0.49
NPLOC4-212ENST00000573328 MAP3K11Q16584 847 aa11.97□□□□□ -0.49
NPLOC4-212ENST00000573328 SPRYD7Q5W111 196 aa11.97□□□□□ -0.49
NPLOC4-212ENST00000573328 FTSJ3Q8IY81 847 aaKnown RBP11.97□□□□□ -0.49
NPLOC4-212ENST00000573328 ANKRD13AQ8IZ07 590 aa11.97□□□□□ -0.49
NPLOC4-212ENST00000573328 WNK4Q96J92 1243 aa11.97□□□□□ -0.49
NPLOC4-212ENST00000573328 COPRSQ9NQ92 184 aa11.97□□□□□ -0.49
NPLOC4-212ENST00000573328 SUGT1Q9Y2Z0 365 aa11.97□□□□□ -0.49
NPLOC4-212ENST00000573328 MANSC4A6NHS7 340 aaPredicted RBP11.96□□□□□ -0.49
NPLOC4-212ENST00000573328 USP2O75604 605 aaPredicted RBP11.96□□□□□ -0.49
NPLOC4-212ENST00000573328 LDHBP07195 334 aaKnown RBP11.96□□□□□ -0.49
NPLOC4-212ENST00000573328 ZBTB48P10074 688 aaPredicted RBP11.96□□□□□ -0.49
NPLOC4-212ENST00000573328 PHKA1P46020 1223 aa11.96□□□□□ -0.49
NPLOC4-212ENST00000573328 TM4SF4P48230 202 aa11.96□□□□□ -0.49
NPLOC4-212ENST00000573328 ZDHHC15Q96MV8 337 aa11.96□□□□□ -0.49
NPLOC4-212ENST00000573328 ELP3Q9H9T3 547 aa11.96□□□□□ -0.49
NPLOC4-212ENST00000573328 DENND2AQ9ULE3 1009 aa11.96□□□□□ -0.49
NPLOC4-212ENST00000573328 UNCXA6NJT0 531 aa11.95□□□□□ -0.5
NPLOC4-212ENST00000573328 PRDX5P30044 214 aa11.95□□□□□ -0.5
NPLOC4-212ENST00000573328 ADORA1P30542 326 aa11.95□□□□□ -0.5
NPLOC4-212ENST00000573328 HHIPL2Q6UWX4 724 aa11.95□□□□□ -0.5
NPLOC4-212ENST00000573328 CTU1Q7Z7A3 348 aaKnown RBP11.95□□□□□ -0.5
NPLOC4-212ENST00000573328 CDAN1Q8IWY9 1227 aa11.95□□□□□ -0.5
NPLOC4-212ENST00000573328 TMEM57Q8N5G2 664 aa11.95□□□□□ -0.5
NPLOC4-212ENST00000573328 AKAP2Q9Y2D5 859 aa11.95□□□□□ -0.5
NPLOC4-212ENST00000573328 CSADQ9Y600 493 aa11.95□□□□□ -0.5
NPLOC4-212ENST00000573328 A0A1B0GUL7 405 aa11.94□□□□□ -0.5
NPLOC4-212ENST00000573328 SEMA3EO15041 775 aa11.94□□□□□ -0.5
NPLOC4-212ENST00000573328 ALDH1A1P00352 501 aa11.94□□□□□ -0.5
NPLOC4-212ENST00000573328 TIMM10P62072 90 aa11.94□□□□□ -0.5
NPLOC4-212ENST00000573328 TFCP2Q12800 502 aa11.94□□□□□ -0.5
NPLOC4-212ENST00000573328 G3BP1Q13283 466 aaKnown RBP eCLIP11.94□□□□□ -0.5
NPLOC4-212ENST00000573328 MTX1Q13505 466 aa11.94□□□□□ -0.5
NPLOC4-212ENST00000573328 DIXDC1Q155Q3 683 aa11.94□□□□□ -0.5
NPLOC4-212ENST00000573328 GORABQ5T7V8 394 aa11.94□□□□□ -0.5
NPLOC4-212ENST00000573328 CCDC102BQ68D86 513 aa11.94□□□□□ -0.5
NPLOC4-212ENST00000573328 APOBEC3HQ6NTF7 200 aaKnown RBP11.94□□□□□ -0.5
NPLOC4-212ENST00000573328 DZIP1Q86YF9 867 aaKnown RBP11.94□□□□□ -0.5
NPLOC4-212ENST00000573328 ITPRIPQ8IWB1 547 aa11.94□□□□□ -0.5
NPLOC4-212ENST00000573328 ZGPATQ8N5A5 531 aaKnown RBP11.94□□□□□ -0.5
NPLOC4-212ENST00000573328 OPTNQ96CV9 577 aa11.94□□□□□ -0.5
NPLOC4-212ENST00000573328 HOOK2Q96ED9 719 aa11.94□□□□□ -0.5
NPLOC4-212ENST00000573328 TEPSINQ96N21 525 aa11.94□□□□□ -0.5
NPLOC4-212ENST00000573328 NEUROD6Q96NK8 337 aa11.94□□□□□ -0.5
NPLOC4-212ENST00000573328 DAGLAQ9Y4D2 1042 aa11.94□□□□□ -0.5
NPLOC4-212ENST00000573328 MAST2Q6P0Q8 1798 aa11.94□□□□□ -0.5
NPLOC4-212ENST00000573328 RPAP1Q9BWH6 1393 aaPredicted RBP11.93□□□□□ -0.5
NPLOC4-212ENST00000573328 MYO5AQ9Y4I1 1855 aaKnown RBP11.93□□□□□ -0.5
NPLOC4-212ENST00000573328 ZBED9Q6R2W3 1325 aa11.93□□□□□ -0.5
NPLOC4-212ENST00000573328 INHBEP58166 350 aa11.93□□□□□ -0.5
NPLOC4-212ENST00000573328 OS9Q13438 667 aaPredicted RBP11.93□□□□□ -0.5
NPLOC4-212ENST00000573328 MVPQ14764 893 aaKnown RBP11.93□□□□□ -0.5
NPLOC4-212ENST00000573328 OTUD7BQ6GQQ9 843 aa11.93□□□□□ -0.5
NPLOC4-212ENST00000573328 FAM83AQ86UY5 434 aa11.93□□□□□ -0.5
NPLOC4-212ENST00000573328 IFNL1Q8IU54 200 aa11.93□□□□□ -0.5
NPLOC4-212ENST00000573328 ZNF296Q8WUU4 475 aaPredicted RBP11.93□□□□□ -0.5
NPLOC4-212ENST00000573328 MRIQ9BWK5 157 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms