RNA–Protein interactions for RNA: ENST00000573203.5

NDE1-207, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 762 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-207ENST00000573203 CYP4F22Q6NT55 531 aa11.3□□□□□ -0.6
NDE1-207ENST00000573203 SAPCD2Q86UD0 394 aa11.3□□□□□ -0.6
NDE1-207ENST00000573203 CERS5Q8N5B7 392 aa11.3□□□□□ -0.6
NDE1-207ENST00000573203 VGLL2Q8N8G2 317 aa11.3□□□□□ -0.6
NDE1-207ENST00000573203 TDRD7Q8NHU6 1098 aaKnown RBP11.3□□□□□ -0.6
NDE1-207ENST00000573203 CAPNS2Q96L46 248 aa11.3□□□□□ -0.6
NDE1-207ENST00000573203 FAM205AQ6ZU69 1335 aa11.3□□□□□ -0.6
NDE1-207ENST00000573203 MYH13Q9UKX3 1938 aa11.29□□□□□ -0.6
NDE1-207ENST00000573203 SLC5A1P13866 664 aa11.29□□□□□ -0.6
NDE1-207ENST00000573203 DLGAP5Q15398 846 aa11.29□□□□□ -0.6
NDE1-207ENST00000573203 ATG9AQ7Z3C6 839 aa11.29□□□□□ -0.6
NDE1-207ENST00000573203 FBXO33Q7Z6M2 555 aa11.29□□□□□ -0.6
NDE1-207ENST00000573203 FTSJ3Q8IY81 847 aaKnown RBP11.29□□□□□ -0.6
NDE1-207ENST00000573203 C2orf69Q8N8R5 385 aa11.29□□□□□ -0.6
NDE1-207ENST00000573203 CDCA5Q96FF9 252 aa11.29□□□□□ -0.6
NDE1-207ENST00000573203 GBA2Q9HCG7 927 aaPredicted RBP11.29□□□□□ -0.6
NDE1-207ENST00000573203 CEP126Q9P2H0 1117 aa11.29□□□□□ -0.6
NDE1-207ENST00000573203 IQSEC3Q9UPP2 1182 aaPredicted RBP11.29□□□□□ -0.6
NDE1-207ENST00000573203 ECM29Q5VYK3 1845 aa11.29□□□□□ -0.6
NDE1-207ENST00000573203 ARAP2Q8WZ64 1704 aa11.29□□□□□ -0.6
NDE1-207ENST00000573203 RIOK3O14730 519 aaKnown RBP11.28□□□□□ -0.6
NDE1-207ENST00000573203 SRGAP3O43295 1099 aa11.28□□□□□ -0.6
NDE1-207ENST00000573203 CIAO1O76071 339 aa11.28□□□□□ -0.6
NDE1-207ENST00000573203 GNAI2P04899 355 aa11.28□□□□□ -0.6
NDE1-207ENST00000573203 BCAMP50895 628 aa11.28□□□□□ -0.6
NDE1-207ENST00000573203 HUNKP57058 714 aa11.28□□□□□ -0.6
NDE1-207ENST00000573203 CHAF1AQ13111 956 aaPredicted RBP11.28□□□□□ -0.6
NDE1-207ENST00000573203 MFSD14BQ5SR56 506 aa11.28□□□□□ -0.6
NDE1-207ENST00000573203 TMEM57Q8N5G2 664 aa11.28□□□□□ -0.6
NDE1-207ENST00000573203 LPIN2Q92539 896 aa11.28□□□□□ -0.6
NDE1-207ENST00000573203 AIDAQ96BJ3 306 aa11.28□□□□□ -0.6
NDE1-207ENST00000573203 HHIPL1Q96JK4 782 aa11.28□□□□□ -0.6
NDE1-207ENST00000573203 SCAF8Q9UPN6 1271 aaKnown RBP11.28□□□□□ -0.6
NDE1-207ENST00000573203 PA2G4Q9UQ80 394 aaKnown RBP11.28□□□□□ -0.6
NDE1-207ENST00000573203 FGFR2P21802 821 aa11.27□□□□□ -0.61
NDE1-207ENST00000573203 IL15P40933 162 aaPredicted RBP11.27□□□□□ -0.61
NDE1-207ENST00000573203 RBM5P52756 815 aaKnown RBP eCLIP11.27□□□□□ -0.61
NDE1-207ENST00000573203 ATP2B3Q16720 1220 aa11.27□□□□□ -0.61
NDE1-207ENST00000573203 CFAP100Q494V2 611 aa11.27□□□□□ -0.61
NDE1-207ENST00000573203 DZIP1LQ8IYY4 767 aaKnown RBP11.27□□□□□ -0.61
NDE1-207ENST00000573203 COPRSQ9NQ92 184 aa11.27□□□□□ -0.61
NDE1-207ENST00000573203 TAOK2Q9UL54 1235 aa11.27□□□□□ -0.61
NDE1-207ENST00000573203 MYO1BO43795 1136 aa11.26□□□□□ -0.61
NDE1-207ENST00000573203 MAP2K1Q02750 393 aaPredicted RBP11.26□□□□□ -0.61
NDE1-207ENST00000573203 MTX1Q13505 466 aa11.26□□□□□ -0.61
NDE1-207ENST00000573203 PRAMEF18Q5VWM3 479 aa11.26□□□□□ -0.61
NDE1-207ENST00000573203 APOBEC3FQ8IUX4 373 aaKnown RBP11.26□□□□□ -0.61
NDE1-207ENST00000573203 ITPRIPQ8IWB1 547 aa11.26□□□□□ -0.61
NDE1-207ENST00000573203 MTMR14Q8NCE2 650 aa11.26□□□□□ -0.61
NDE1-207ENST00000573203 TBC1D22AQ8WUA7 517 aa11.26□□□□□ -0.61
NDE1-207ENST00000573203 ZBED3Q96IU2 234 aaPredicted RBP11.26□□□□□ -0.61
NDE1-207ENST00000573203 TTF2Q9UNY4 1162 aaKnown RBP11.26□□□□□ -0.61
NDE1-207ENST00000573203 THSD7BQ9C0I4 1608 aa11.26□□□□□ -0.61
NDE1-207ENST00000573203 AOC2O75106 756 aa11.25□□□□□ -0.61
NDE1-207ENST00000573203 NF2P35240 595 aa11.25□□□□□ -0.61
NDE1-207ENST00000573203 MAP2K2P36507 400 aa11.25□□□□□ -0.61
NDE1-207ENST00000573203 RGMBQ6NW40 437 aa11.25□□□□□ -0.61
NDE1-207ENST00000573203 WBP1LQ9NX94 342 aa11.25□□□□□ -0.61
NDE1-207ENST00000573203 SERPINA10Q9UK55 444 aa11.25□□□□□ -0.61
NDE1-207ENST00000573203 PCDHAC2Q9Y5I4 1007 aa11.25□□□□□ -0.61
NDE1-207ENST00000573203 PAPPA2Q9BXP8 1791 aa11.25□□□□□ -0.61
NDE1-207ENST00000573203 CLRN2A0PK11 232 aa11.24□□□□□ -0.61
NDE1-207ENST00000573203 FOXN1O15353 648 aa11.24□□□□□ -0.61
NDE1-207ENST00000573203 SEC24BO95487 1268 aa11.24□□□□□ -0.61
NDE1-207ENST00000573203 RLBP1P12271 317 aa11.24□□□□□ -0.61
NDE1-207ENST00000573203 ZNF157P51786 506 aaPredicted RBP11.24□□□□□ -0.61
NDE1-207ENST00000573203 FKBP1BP68106 108 aa11.24□□□□□ -0.61
NDE1-207ENST00000573203 TTLL12Q14166 644 aaPredicted RBP11.24□□□□□ -0.61
NDE1-207ENST00000573203 PRMT6Q96LA8 375 aaPredicted RBP11.24□□□□□ -0.61
NDE1-207ENST00000573203 BEGAINQ9BUH8 593 aa11.24□□□□□ -0.61
NDE1-207ENST00000573203 VEZTQ9HBM0 779 aa11.24□□□□□ -0.61
NDE1-207ENST00000573203 GNL3LQ9NVN8 582 aaKnown RBP11.24□□□□□ -0.61
NDE1-207ENST00000573203 PNMA6EA0A0J9YXQ4 647 aa11.23□□□□□ -0.61
NDE1-207ENST00000573203 ECM2O94769 699 aaPredicted RBP11.23□□□□□ -0.61
NDE1-207ENST00000573203 MS4A1P11836 297 aa11.23□□□□□ -0.61
NDE1-207ENST00000573203 CRKP46108 304 aa11.23□□□□□ -0.61
NDE1-207ENST00000573203 CTCFP49711 727 aaPredicted RBP11.23□□□□□ -0.61
NDE1-207ENST00000573203 TFCP2Q12800 502 aa11.23□□□□□ -0.61
NDE1-207ENST00000573203 NOGQ13253 232 aa11.23□□□□□ -0.61
NDE1-207ENST00000573203 G3BP1Q13283 466 aaKnown RBP eCLIP11.23□□□□□ -0.61
NDE1-207ENST00000573203 GRIK5Q16478 980 aa11.23□□□□□ -0.61
NDE1-207ENST00000573203 WDR66Q8TBY9 1149 aa11.23□□□□□ -0.61
NDE1-207ENST00000573203 CCDC102AQ96A19 550 aa11.23□□□□□ -0.61
NDE1-207ENST00000573203 RNF25Q96BH1 459 aaPredicted RBP11.23□□□□□ -0.61
NDE1-207ENST00000573203 DEFB129Q9H1M3 183 aa11.23□□□□□ -0.61
NDE1-207ENST00000573203 AKAP2Q9Y2D5 859 aa11.23□□□□□ -0.61
NDE1-207ENST00000573203 COL1A1P02452 1464 aaPredicted RBP11.23□□□□□ -0.61
NDE1-207ENST00000573203 POTEFA5A3E0 1075 aa11.22□□□□□ -0.61
NDE1-207ENST00000573203 POTEB2H3BUK9 544 aa11.22□□□□□ -0.61
NDE1-207ENST00000573203 MAST3O60307 1309 aa11.22□□□□□ -0.61
NDE1-207ENST00000573203 TIMM10P62072 90 aa11.22□□□□□ -0.61
NDE1-207ENST00000573203 IRX5P78411 483 aaPredicted RBP11.22□□□□□ -0.61
NDE1-207ENST00000573203 HDLBPQ00341 1268 aaKnown RBP11.22□□□□□ -0.61
NDE1-207ENST00000573203 COL13A1Q5TAT6 717 aaPredicted RBP11.22□□□□□ -0.61
NDE1-207ENST00000573203 MAMSTRQ6ZN01 415 aa11.22□□□□□ -0.61
NDE1-207ENST00000573203 MOB2Q70IA6 237 aa11.22□□□□□ -0.61
NDE1-207ENST00000573203 PANK1Q8TE04 598 aa11.22□□□□□ -0.61
NDE1-207ENST00000573203 TDRD3Q9H7E2 651 aaKnown RBP11.22□□□□□ -0.61
NDE1-207ENST00000573203 C1orf115Q9H7X2 142 aa11.22□□□□□ -0.61
NDE1-207ENST00000573203 SUGT1Q9Y2Z0 365 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms