RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 TDRD3Q9H7E2 651 aaKnown RBP21.59■■□□□ 1.05
SMG6-212ENST00000573153 PNMA6EA0A0J9YXQ4 647 aa21.58■■□□□ 1.05
SMG6-212ENST00000573153 SLC5A1P13866 664 aa21.58■■□□□ 1.05
SMG6-212ENST00000573153 ADORA1P30542 326 aa21.58■■□□□ 1.05
SMG6-212ENST00000573153 HDLBPQ00341 1268 aaKnown RBP21.58■■□□□ 1.05
SMG6-212ENST00000573153 TBC1D22AQ8WUA7 517 aa21.58■■□□□ 1.05
SMG6-212ENST00000573153 PHKA1P46020 1223 aa21.57■■□□□ 1.04
SMG6-212ENST00000573153 RASA3Q14644 834 aa21.57■■□□□ 1.04
SMG6-212ENST00000573153 NBPF12Q5TAG4 269 aaPredicted RBP21.57■■□□□ 1.04
SMG6-212ENST00000573153 ZKSCAN2Q63HK3 967 aa21.57■■□□□ 1.04
SMG6-212ENST00000573153 VPS37DQ86XT2 251 aa21.57■■□□□ 1.04
SMG6-212ENST00000573153 RNF186Q9NXI6 227 aa21.57■■□□□ 1.04
SMG6-212ENST00000573153 SAGE1Q9NXZ1 904 aa21.57■■□□□ 1.04
SMG6-212ENST00000573153 SRGAP3O43295 1099 aa21.56■■□□□ 1.04
SMG6-212ENST00000573153 APOBEC3HQ6NTF7 200 aaKnown RBP21.56■■□□□ 1.04
SMG6-212ENST00000573153 MRIQ9BWK5 157 aa21.56■■□□□ 1.04
SMG6-212ENST00000573153 VEZTQ9HBM0 779 aa21.56■■□□□ 1.04
SMG6-212ENST00000573153 CEP126Q9P2H0 1117 aa21.56■■□□□ 1.04
SMG6-212ENST00000573153 PRKG1Q13976 671 aa21.55■■□□□ 1.04
SMG6-212ENST00000573153 ZDHHC15Q96MV8 337 aa21.55■■□□□ 1.04
SMG6-212ENST00000573153 BEGAINQ9BUH8 593 aa21.55■■□□□ 1.04
SMG6-212ENST00000573153 SUGT1Q9Y2Z0 365 aa21.55■■□□□ 1.04
SMG6-212ENST00000573153 CASP8AP2Q9UKL3 1982 aa21.55■■□□□ 1.04
SMG6-212ENST00000573153 SALL1Q9NSC2 1324 aa21.55■■□□□ 1.04
SMG6-212ENST00000573153 MYO1BO43795 1136 aa21.54■■□□□ 1.04
SMG6-212ENST00000573153 PRDX5P30044 214 aa21.54■■□□□ 1.04
SMG6-212ENST00000573153 NF2P35240 595 aa21.54■■□□□ 1.04
SMG6-212ENST00000573153 RBM5P52756 815 aaKnown RBP eCLIP21.54■■□□□ 1.04
SMG6-212ENST00000573153 POLA2Q14181 598 aa21.54■■□□□ 1.04
SMG6-212ENST00000573153 ANGEL1Q9UNK9 670 aaKnown RBP21.54■■□□□ 1.04
SMG6-212ENST00000573153 AKAP11Q9UKA4 1901 aa21.54■■□□□ 1.04
SMG6-212ENST00000573153 USP2O75604 605 aaPredicted RBP21.53■■□□□ 1.04
SMG6-212ENST00000573153 GNAI2P04899 355 aa21.53■■□□□ 1.04
SMG6-212ENST00000573153 TFCP2Q12800 502 aa21.53■■□□□ 1.04
SMG6-212ENST00000573153 CLMNQ96JQ2 1002 aa21.53■■□□□ 1.04
SMG6-212ENST00000573153 GJA5P36382 358 aa21.52■■□□□ 1.04
SMG6-212ENST00000573153 CACNB3P54284 484 aa21.52■■□□□ 1.04
SMG6-212ENST00000573153 SPRYD7Q5W111 196 aa21.52■■□□□ 1.04
SMG6-212ENST00000573153 CCDC102BQ68D86 513 aa21.52■■□□□ 1.04
SMG6-212ENST00000573153 ARMC9Q7Z3E5 817 aa21.52■■□□□ 1.04
SMG6-212ENST00000573153 TMEM39BQ9GZU3 492 aa21.52■■□□□ 1.04
SMG6-212ENST00000573153 ZBTB7BO15156 539 aaPredicted RBP21.51■■□□□ 1.03
SMG6-212ENST00000573153 TM4SF4P48230 202 aa21.51■■□□□ 1.03
SMG6-212ENST00000573153 TIMM10P62072 90 aa21.51■■□□□ 1.03
SMG6-212ENST00000573153 RASGRF1Q13972 1273 aa21.51■■□□□ 1.03
SMG6-212ENST00000573153 TTLL12Q14166 644 aaPredicted RBP21.51■■□□□ 1.03
SMG6-212ENST00000573153 HHIPL2Q6UWX4 724 aa21.51■■□□□ 1.03
SMG6-212ENST00000573153 WDR66Q8TBY9 1149 aa21.51■■□□□ 1.03
SMG6-212ENST00000573153 TEKT1Q969V4 418 aa21.51■■□□□ 1.03
SMG6-212ENST00000573153 RFX7Q2KHR2 1363 aa21.5■■□□□ 1.03
SMG6-212ENST00000573153 A0A1B0GUL7 405 aa21.5■■□□□ 1.03
SMG6-212ENST00000573153 TCP10L2B9ZVM9 353 aa21.5■■□□□ 1.03
SMG6-212ENST00000573153 SEMA3EO15041 775 aa21.5■■□□□ 1.03
SMG6-212ENST00000573153 FRAT2O75474 233 aaPredicted RBP21.5■■□□□ 1.03
SMG6-212ENST00000573153 TRPA1O75762 1119 aa21.5■■□□□ 1.03
SMG6-212ENST00000573153 DIXDC1Q155Q3 683 aa21.5■■□□□ 1.03
SMG6-212ENST00000573153 SSH3Q8TE77 659 aa21.5■■□□□ 1.03
SMG6-212ENST00000573153 DAGLAQ9Y4D2 1042 aa21.5■■□□□ 1.03
SMG6-212ENST00000573153 PDS5AQ29RF7 1337 aaKnown RBP21.5■■□□□ 1.03
SMG6-212ENST00000573153 CAPN15O75808 1086 aa21.49■■□□□ 1.03
SMG6-212ENST00000573153 TNFAIP1Q13829 316 aa21.49■■□□□ 1.03
SMG6-212ENST00000573153 REM2Q8IYK8 340 aaPredicted RBP21.49■■□□□ 1.03
SMG6-212ENST00000573153 ZNF384Q8TF68 577 aa21.49■■□□□ 1.03
SMG6-212ENST00000573153 XAGE2Q96GT9 111 aa21.49■■□□□ 1.03
SMG6-212ENST00000573153 RPAP1Q9BWH6 1393 aaPredicted RBP21.48■■□□□ 1.03
SMG6-212ENST00000573153 UNCXA6NJT0 531 aa21.48■■□□□ 1.03
SMG6-212ENST00000573153 MKRN3Q13064 507 aaKnown RBP21.48■■□□□ 1.03
SMG6-212ENST00000573153 SUPT20HL1Q3ZLR7 823 aa21.48■■□□□ 1.03
SMG6-212ENST00000573153 FKBP1CQ5VVH2 108 aa21.48■■□□□ 1.03
SMG6-212ENST00000573153 ABHD8Q96I13 439 aa21.48■■□□□ 1.03
SMG6-212ENST00000573153 WNK4Q96J92 1243 aa21.48■■□□□ 1.03
SMG6-212ENST00000573153 C1orf115Q9H7X2 142 aa21.48■■□□□ 1.03
SMG6-212ENST00000573153 MAST3O60307 1309 aa21.48■■□□□ 1.03
SMG6-212ENST00000573153 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.47■■□□□ 1.03
SMG6-212ENST00000573153 CFHR5Q9BXR6 569 aa21.47■■□□□ 1.03
SMG6-212ENST00000573153 DENND2AQ9ULE3 1009 aa21.47■■□□□ 1.03
SMG6-212ENST00000573153 PPP1R12BO60237 982 aaPredicted RBP21.46■■□□□ 1.03
SMG6-212ENST00000573153 ATP8B2P98198 1209 aa21.46■■□□□ 1.03
SMG6-212ENST00000573153 FAM83AQ86UY5 434 aa21.46■■□□□ 1.03
SMG6-212ENST00000573153 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.46■■□□□ 1.03
SMG6-212ENST00000573153 R3HDMLQ9H3Y0 253 aa21.46■■□□□ 1.03
SMG6-212ENST00000573153 GAKO14976 1311 aa21.46■■□□□ 1.03
SMG6-212ENST00000573153 NFIAQ12857 509 aa21.45■■□□□ 1.02
SMG6-212ENST00000573153 CDC42EP5Q6NZY7 148 aa21.45■■□□□ 1.02
SMG6-212ENST00000573153 PI16Q6UXB8 463 aa21.45■■□□□ 1.02
SMG6-212ENST00000573153 MCOLN1Q9GZU1 580 aa21.45■■□□□ 1.02
SMG6-212ENST00000573153 ATRNL1Q5VV63 1379 aa21.45■■□□□ 1.02
SMG6-212ENST00000573153 ZBTB48P10074 688 aaPredicted RBP21.44■■□□□ 1.02
SMG6-212ENST00000573153 PANK1Q8TE04 598 aa21.44■■□□□ 1.02
SMG6-212ENST00000573153 GNL3LQ9NVN8 582 aaKnown RBP21.44■■□□□ 1.02
SMG6-212ENST00000573153 NOP58Q9Y2X3 529 aaKnown RBP21.44■■□□□ 1.02
SMG6-212ENST00000573153 IGF2BP3O00425 579 aaKnown RBP eCLIP21.43■■□□□ 1.02
SMG6-212ENST00000573153 ARID4AP29374 1257 aaPredicted RBP21.43■■□□□ 1.02
SMG6-212ENST00000573153 ANKRD13AQ8IZ07 590 aa21.43■■□□□ 1.02
SMG6-212ENST00000573153 CNKSR2Q8WXI2 1034 aa21.43■■□□□ 1.02
SMG6-212ENST00000573153 HMG20BQ9P0W2 317 aa21.43■■□□□ 1.02
SMG6-212ENST00000573153 FAM198AQ9UFP1 575 aa21.43■■□□□ 1.02
SMG6-212ENST00000573153 AKAP2Q9Y2D5 859 aa21.43■■□□□ 1.02
SMG6-212ENST00000573153 MYH2Q9UKX2 1941 aa21.43■■□□□ 1.02
SMG6-212ENST00000573153 TESPA1A2RU30 521 aaPredicted RBP21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms