RNA–Protein interactions for RNA: ENST00000572756.5

NDE1-205, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 5

Gene NDE1, Length 915 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-205ENST00000572756 RGMBQ6NW40 437 aa19.98■□□□□ 0.79
NDE1-205ENST00000572756 DEFB129Q9H1M3 183 aa19.98■□□□□ 0.79
NDE1-205ENST00000572756 GNL3LQ9NVN8 582 aaKnown RBP19.98■□□□□ 0.79
NDE1-205ENST00000572756 FAM155AB1AL88 458 aaPredicted RBP19.97■□□□□ 0.79
NDE1-205ENST00000572756 MAP2K1Q02750 393 aaPredicted RBP19.97■□□□□ 0.79
NDE1-205ENST00000572756 CEP85Q6P2H3 762 aa19.97■□□□□ 0.79
NDE1-205ENST00000572756 XAGE2Q96GT9 111 aa19.97■□□□□ 0.79
NDE1-205ENST00000572756 ZNF70Q9UC06 446 aaPredicted RBP19.97■□□□□ 0.79
NDE1-205ENST00000572756 NOP58Q9Y2X3 529 aaKnown RBP19.97■□□□□ 0.79
NDE1-205ENST00000572756 PPP2R3BQ9Y5P8 575 aa19.97■□□□□ 0.79
NDE1-205ENST00000572756 SALL1Q9NSC2 1324 aa19.97■□□□□ 0.79
NDE1-205ENST00000572756 SSC5DA1L4H1 1573 aa19.96■□□□□ 0.79
NDE1-205ENST00000572756 FOXN1O15353 648 aa19.96■□□□□ 0.79
NDE1-205ENST00000572756 MOB2Q70IA6 237 aa19.96■□□□□ 0.79
NDE1-205ENST00000572756 TEKT1Q969V4 418 aa19.96■□□□□ 0.79
NDE1-205ENST00000572756 ZDHHC15Q96MV8 337 aa19.96■□□□□ 0.79
NDE1-205ENST00000572756 TDRD3Q9H7E2 651 aaKnown RBP19.96■□□□□ 0.79
NDE1-205ENST00000572756 DENND2AQ9ULE3 1009 aa19.96■□□□□ 0.79
NDE1-205ENST00000572756 MAST3O60307 1309 aa19.96■□□□□ 0.79
NDE1-205ENST00000572756 PDS5AQ29RF7 1337 aaKnown RBP19.96■□□□□ 0.79
NDE1-205ENST00000572756 RASGRF1Q13972 1273 aa19.95■□□□□ 0.78
NDE1-205ENST00000572756 VEZTQ9HBM0 779 aa19.95■□□□□ 0.78
NDE1-205ENST00000572756 COG6Q9Y2V7 657 aa19.95■□□□□ 0.78
NDE1-205ENST00000572756 SLC10A3P09131 477 aa19.94■□□□□ 0.78
NDE1-205ENST00000572756 PRDX5P30044 214 aa19.94■□□□□ 0.78
NDE1-205ENST00000572756 NF2P35240 595 aa19.94■□□□□ 0.78
NDE1-205ENST00000572756 ZNF157P51786 506 aaPredicted RBP19.94■□□□□ 0.78
NDE1-205ENST00000572756 NOGQ13253 232 aa19.94■□□□□ 0.78
NDE1-205ENST00000572756 HHIPL2Q6UWX4 724 aa19.94■□□□□ 0.78
NDE1-205ENST00000572756 CCDC102AQ96A19 550 aa19.94■□□□□ 0.78
NDE1-205ENST00000572756 ZIC5Q96T25 663 aa19.94■□□□□ 0.78
NDE1-205ENST00000572756 GPR108Q9NPR9 543 aa19.94■□□□□ 0.78
NDE1-205ENST00000572756 ZBTB40Q9NUA8 1239 aa19.94■□□□□ 0.78
NDE1-205ENST00000572756 DDX19BQ9UMR2 479 aa19.94■□□□□ 0.78
NDE1-205ENST00000572756 UBE2Q2LH0YL09 131 aa19.93■□□□□ 0.78
NDE1-205ENST00000572756 SURF6O75683 361 aaKnown RBP19.93■□□□□ 0.78
NDE1-205ENST00000572756 RASA3Q14644 834 aa19.93■□□□□ 0.78
NDE1-205ENST00000572756 APOBEC3HQ6NTF7 200 aaKnown RBP19.93■□□□□ 0.78
NDE1-205ENST00000572756 AIDAQ96BJ3 306 aa19.93■□□□□ 0.78
NDE1-205ENST00000572756 NEUROD6Q96NK8 337 aa19.93■□□□□ 0.78
NDE1-205ENST00000572756 MYH2Q9UKX2 1941 aa19.93■□□□□ 0.78
NDE1-205ENST00000572756 TNFAIP1Q13829 316 aa19.92■□□□□ 0.78
NDE1-205ENST00000572756 PDE3AQ14432 1141 aa19.92■□□□□ 0.78
NDE1-205ENST00000572756 C20orf194Q5TEA3 1177 aa19.92■□□□□ 0.78
NDE1-205ENST00000572756 RASAL3Q86YV0 1011 aa19.92■□□□□ 0.78
NDE1-205ENST00000572756 AKAP11Q9UKA4 1901 aa19.92■□□□□ 0.78
NDE1-205ENST00000572756 LDHBP07195 334 aaKnown RBP19.91■□□□□ 0.78
NDE1-205ENST00000572756 ARID4AP29374 1257 aaPredicted RBP19.91■□□□□ 0.78
NDE1-205ENST00000572756 CTCFP49711 727 aaPredicted RBP19.91■□□□□ 0.78
NDE1-205ENST00000572756 TNNI3KQ59H18 835 aa19.91■□□□□ 0.78
NDE1-205ENST00000572756 NBPF12Q5TAG4 269 aaPredicted RBP19.91■□□□□ 0.78
NDE1-205ENST00000572756 COL13A1Q5TAT6 717 aaPredicted RBP19.91■□□□□ 0.78
NDE1-205ENST00000572756 TEPSINQ96N21 525 aa19.91■□□□□ 0.78
NDE1-205ENST00000572756 FPGT-TNNI3KV9GXZ4 949 aa19.91■□□□□ 0.78
NDE1-205ENST00000572756 OS9Q13438 667 aaPredicted RBP19.9■□□□□ 0.78
NDE1-205ENST00000572756 TTLL12Q14166 644 aaPredicted RBP19.9■□□□□ 0.78
NDE1-205ENST00000572756 DIXDC1Q155Q3 683 aa19.9■□□□□ 0.78
NDE1-205ENST00000572756 MAP3K11Q16584 847 aa19.9■□□□□ 0.78
NDE1-205ENST00000572756 LDLRAD1Q5T700 205 aa19.9■□□□□ 0.78
NDE1-205ENST00000572756 ARMC9Q7Z3E5 817 aa19.9■□□□□ 0.78
NDE1-205ENST00000572756 ZGPATQ8N5A5 531 aaKnown RBP19.9■□□□□ 0.78
NDE1-205ENST00000572756 DAGLAQ9Y4D2 1042 aa19.9■□□□□ 0.78
NDE1-205ENST00000572756 TCP10L2B9ZVM9 353 aa19.89■□□□□ 0.77
NDE1-205ENST00000572756 HSPA8P11142 646 aaKnown RBP19.89■□□□□ 0.77
NDE1-205ENST00000572756 PRKG1Q13976 671 aa19.89■□□□□ 0.77
NDE1-205ENST00000572756 SUPT20HL1Q3ZLR7 823 aa19.89■□□□□ 0.77
NDE1-205ENST00000572756 FKBP1CQ5VVH2 108 aa19.89■□□□□ 0.77
NDE1-205ENST00000572756 SIRT2Q8IXJ6 389 aa19.89■□□□□ 0.77
NDE1-205ENST00000572756 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.89■□□□□ 0.77
NDE1-205ENST00000572756 HMG20BQ9P0W2 317 aa19.89■□□□□ 0.77
NDE1-205ENST00000572756 FZD1Q9UP38 647 aa19.89■□□□□ 0.77
NDE1-205ENST00000572756 OTOFQ9HC10 1997 aa19.88■□□□□ 0.77
NDE1-205ENST00000572756 CACNB3P54284 484 aa19.88■□□□□ 0.77
NDE1-205ENST00000572756 GORABQ5T7V8 394 aa19.88■□□□□ 0.77
NDE1-205ENST00000572756 PI16Q6UXB8 463 aa19.88■□□□□ 0.77
NDE1-205ENST00000572756 CDAN1Q8IWY9 1227 aa19.88■□□□□ 0.77
NDE1-205ENST00000572756 RPAP2Q8IXW5 612 aaPredicted RBP19.88■□□□□ 0.77
NDE1-205ENST00000572756 DBNDD2Q9BQY9 259 aa19.88■□□□□ 0.77
NDE1-205ENST00000572756 TMEM39BQ9GZU3 492 aa19.88■□□□□ 0.77
NDE1-205ENST00000572756 ANGEL1Q9UNK9 670 aaKnown RBP19.88■□□□□ 0.77
NDE1-205ENST00000572756 MCAMP43121 646 aa19.87■□□□□ 0.77
NDE1-205ENST00000572756 TNNI2P48788 182 aa19.87■□□□□ 0.77
NDE1-205ENST00000572756 KIF23Q02241 960 aaPredicted RBP19.87■□□□□ 0.77
NDE1-205ENST00000572756 FAM83AQ86UY5 434 aa19.87■□□□□ 0.77
NDE1-205ENST00000572756 SPATA5Q8NB90 893 aa19.87■□□□□ 0.77
NDE1-205ENST00000572756 CHMP4BQ9H444 224 aaKnown RBP19.87■□□□□ 0.77
NDE1-205ENST00000572756 PRDM10Q9NQV6 1147 aa19.87■□□□□ 0.77
NDE1-205ENST00000572756 EXOC6BQ9Y2D4 811 aa19.87■□□□□ 0.77
NDE1-205ENST00000572756 LAMB1P07942 1786 aa19.87■□□□□ 0.77
NDE1-205ENST00000572756 GAKO14976 1311 aa19.86■□□□□ 0.77
NDE1-205ENST00000572756 PPP1R12BO60237 982 aaPredicted RBP19.86■□□□□ 0.77
NDE1-205ENST00000572756 UQCRFS1P1P0C7P4 283 aa19.86■□□□□ 0.77
NDE1-205ENST00000572756 EAF2Q96CJ1 260 aaPredicted RBP19.86■□□□□ 0.77
NDE1-205ENST00000572756 BEGAINQ9BUH8 593 aa19.86■□□□□ 0.77
NDE1-205ENST00000572756 TMOD2Q9NZR1 351 aa19.86■□□□□ 0.77
NDE1-205ENST00000572756 ABCF2Q9UG63 623 aa19.86■□□□□ 0.77
NDE1-205ENST00000572756 RPAP1Q9BWH6 1393 aaPredicted RBP19.85■□□□□ 0.77
NDE1-205ENST00000572756 UNCXA6NJT0 531 aa19.85■□□□□ 0.77
NDE1-205ENST00000572756 CA12O43570 354 aa19.85■□□□□ 0.77
NDE1-205ENST00000572756 USP2O75604 605 aaPredicted RBP19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms