RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 DBNLQ9UJU6 430 aaKnown RBP19.44■□□□□ 0.7
CHD3-215ENST00000572750 AKAP11Q9UKA4 1901 aa19.43■□□□□ 0.7
CHD3-215ENST00000572750 PAXIP1Q6ZW49 1069 aaPredicted RBP19.43■□□□□ 0.7
CHD3-215ENST00000572750 AACSQ86V21 672 aa19.43■□□□□ 0.7
CHD3-215ENST00000572750 TBC1D22AQ8WUA7 517 aa19.43■□□□□ 0.7
CHD3-215ENST00000572750 KIF1BPQ96EK5 621 aa19.43■□□□□ 0.7
CHD3-215ENST00000572750 BEGAINQ9BUH8 593 aa19.43■□□□□ 0.7
CHD3-215ENST00000572750 CCDC8Q9H0W5 538 aaPredicted RBP19.43■□□□□ 0.7
CHD3-215ENST00000572750 HDAC9Q9UKV0 1011 aa19.43■□□□□ 0.7
CHD3-215ENST00000572750 TRAF5O00463 557 aa19.42■□□□□ 0.7
CHD3-215ENST00000572750 SEMA3EO15041 775 aa19.42■□□□□ 0.7
CHD3-215ENST00000572750 DGKZQ13574 1117 aa19.42■□□□□ 0.7
CHD3-215ENST00000572750 PI16Q6UXB8 463 aa19.42■□□□□ 0.7
CHD3-215ENST00000572750 GGA3Q9NZ52 723 aa19.42■□□□□ 0.7
CHD3-215ENST00000572750 DENND2AQ9ULE3 1009 aa19.42■□□□□ 0.7
CHD3-215ENST00000572750 TTF2Q9UNY4 1162 aaKnown RBP19.42■□□□□ 0.7
CHD3-215ENST00000572750 PCDHAC2Q9Y5I4 1007 aa19.42■□□□□ 0.7
CHD3-215ENST00000572750 POLR2AP24928 1970 aaKnown RBP19.42■□□□□ 0.7
CHD3-215ENST00000572750 MAST2Q6P0Q8 1798 aa19.42■□□□□ 0.7
CHD3-215ENST00000572750 RAB11FIP3O75154 756 aa19.41■□□□□ 0.7
CHD3-215ENST00000572750 ARID4AP29374 1257 aaPredicted RBP19.41■□□□□ 0.7
CHD3-215ENST00000572750 SCARF1Q14162 830 aa19.41■□□□□ 0.7
CHD3-215ENST00000572750 NBPF9Q3BBW0 867 aa19.41■□□□□ 0.7
CHD3-215ENST00000572750 TTC39AQ5SRH9 613 aa19.41■□□□□ 0.7
CHD3-215ENST00000572750 WDR66Q8TBY9 1149 aa19.41■□□□□ 0.7
CHD3-215ENST00000572750 TRPM7Q96QT4 1865 aa19.4■□□□□ 0.7
CHD3-215ENST00000572750 ECE1P42892 770 aa19.4■□□□□ 0.7
CHD3-215ENST00000572750 MCAMP43121 646 aa19.4■□□□□ 0.7
CHD3-215ENST00000572750 SOX10P56693 466 aa19.4■□□□□ 0.7
CHD3-215ENST00000572750 ZC3H15Q8WU90 426 aaKnown RBP19.4■□□□□ 0.7
CHD3-215ENST00000572750 GLIS2Q9BZE0 524 aaPredicted RBP19.4■□□□□ 0.7
CHD3-215ENST00000572750 TLL2Q9Y6L7 1015 aa19.4■□□□□ 0.7
CHD3-215ENST00000572750 WNT10BO00744 389 aa19.39■□□□□ 0.69
CHD3-215ENST00000572750 SMARCA5O60264 1052 aaPredicted RBP19.39■□□□□ 0.69
CHD3-215ENST00000572750 PRDX5P30044 214 aa19.39■□□□□ 0.69
CHD3-215ENST00000572750 MAP2K2P36507 400 aa19.39■□□□□ 0.69
CHD3-215ENST00000572750 CFAP100Q494V2 611 aa19.39■□□□□ 0.69
CHD3-215ENST00000572750 ANGEL2Q5VTE6 544 aaKnown RBP19.39■□□□□ 0.69
CHD3-215ENST00000572750 CLASRPQ8N2M8 674 aaKnown RBP19.39■□□□□ 0.69
CHD3-215ENST00000572750 LRRCC1Q9C099 1032 aa19.39■□□□□ 0.69
CHD3-215ENST00000572750 HMG20BQ9P0W2 317 aa19.39■□□□□ 0.69
CHD3-215ENST00000572750 PGAP2Q9UHJ9 254 aa19.39■□□□□ 0.69
CHD3-215ENST00000572750 PDS5AQ29RF7 1337 aaKnown RBP19.39■□□□□ 0.69
CHD3-215ENST00000572750 MYO5AQ9Y4I1 1855 aaKnown RBP19.39■□□□□ 0.69
CHD3-215ENST00000572750 ADM5C9JUS6 153 aa19.38■□□□□ 0.69
CHD3-215ENST00000572750 RBM5P52756 815 aaKnown RBP eCLIP19.38■□□□□ 0.69
CHD3-215ENST00000572750 AOX1Q06278 1338 aa19.38■□□□□ 0.69
CHD3-215ENST00000572750 AAMPQ13685 434 aa19.38■□□□□ 0.69
CHD3-215ENST00000572750 CCDC158Q5M9N0 1113 aa19.38■□□□□ 0.69
CHD3-215ENST00000572750 PRPF38BQ5VTL8 546 aaKnown RBP19.38■□□□□ 0.69
CHD3-215ENST00000572750 SPATA5Q8NB90 893 aa19.38■□□□□ 0.69
CHD3-215ENST00000572750 DCTPP1Q9H773 170 aa19.38■□□□□ 0.69
CHD3-215ENST00000572750 SALL1Q9NSC2 1324 aa19.38■□□□□ 0.69
CHD3-215ENST00000572750 SCAF8Q9UPN6 1271 aaKnown RBP19.38■□□□□ 0.69
CHD3-215ENST00000572750 MYH2Q9UKX2 1941 aa19.37■□□□□ 0.69
CHD3-215ENST00000572750 SPDYE2BA6NHP3 402 aa19.37■□□□□ 0.69
CHD3-215ENST00000572750 ZBTB22O15209 634 aa19.37■□□□□ 0.69
CHD3-215ENST00000572750 UQCRFS1P1P0C7P4 283 aa19.37■□□□□ 0.69
CHD3-215ENST00000572750 SPDYE6P0CI01 402 aa19.37■□□□□ 0.69
CHD3-215ENST00000572750 MMP14P50281 582 aa19.37■□□□□ 0.69
CHD3-215ENST00000572750 DLGAP5Q15398 846 aa19.37■□□□□ 0.69
CHD3-215ENST00000572750 ZBED3Q96IU2 234 aaPredicted RBP19.37■□□□□ 0.69
CHD3-215ENST00000572750 SNRKQ9NRH2 765 aa19.37■□□□□ 0.69
CHD3-215ENST00000572750 DOCK2Q92608 1830 aa19.37■□□□□ 0.69
CHD3-215ENST00000572750 MAST3O60307 1309 aa19.36■□□□□ 0.69
CHD3-215ENST00000572750 IFIT2P09913 472 aaKnown RBP19.36■□□□□ 0.69
CHD3-215ENST00000572750 CRKP46108 304 aa19.36■□□□□ 0.69
CHD3-215ENST00000572750 DLK2Q6UY11 383 aa19.36■□□□□ 0.69
CHD3-215ENST00000572750 KRT26Q7Z3Y9 468 aa19.36■□□□□ 0.69
CHD3-215ENST00000572750 MTMR14Q8NCE2 650 aa19.36■□□□□ 0.69
CHD3-215ENST00000572750 DCPSQ96C86 337 aaKnown RBP19.36■□□□□ 0.69
CHD3-215ENST00000572750 ABCF2Q9UG63 623 aa19.36■□□□□ 0.69
CHD3-215ENST00000572750 SERPINA10Q9UK55 444 aa19.36■□□□□ 0.69
CHD3-215ENST00000572750 SUGT1Q9Y2Z0 365 aa19.36■□□□□ 0.69
CHD3-215ENST00000572750 LDHBP07195 334 aaKnown RBP19.35■□□□□ 0.69
CHD3-215ENST00000572750 HDAC1Q13547 482 aaPredicted RBP19.35■□□□□ 0.69
CHD3-215ENST00000572750 DIXDC1Q155Q3 683 aa19.35■□□□□ 0.69
CHD3-215ENST00000572750 USP48Q86UV5 1035 aa19.35■□□□□ 0.69
CHD3-215ENST00000572750 PRMT6Q96LA8 375 aaPredicted RBP19.35■□□□□ 0.69
CHD3-215ENST00000572750 ZIC5Q96T25 663 aa19.35■□□□□ 0.69
CHD3-215ENST00000572750 MKI67P46013 3256 aaKnown RBP19.35■□□□□ 0.69
CHD3-215ENST00000572750 PITPNM2Q9BZ72 1349 aa19.34■□□□□ 0.69
CHD3-215ENST00000572750 CLRN2A0PK11 232 aa19.34■□□□□ 0.69
CHD3-215ENST00000572750 TBC1D9Q6ZT07 1266 aa19.34■□□□□ 0.69
CHD3-215ENST00000572750 CDC37L1Q7L3B6 337 aa19.34■□□□□ 0.69
CHD3-215ENST00000572750 SULF1Q8IWU6 871 aa19.34■□□□□ 0.69
CHD3-215ENST00000572750 ZGPATQ8N5A5 531 aaKnown RBP19.34■□□□□ 0.69
CHD3-215ENST00000572750 TEKT1Q969V4 418 aa19.34■□□□□ 0.69
CHD3-215ENST00000572750 ZNF512BQ96KM6 892 aaPredicted RBP19.34■□□□□ 0.69
CHD3-215ENST00000572750 NDUFB9Q9Y6M9 179 aa19.34■□□□□ 0.69
CHD3-215ENST00000572750 CA12O43570 354 aa19.33■□□□□ 0.68
CHD3-215ENST00000572750 SAPCD2Q86UD0 394 aa19.33■□□□□ 0.68
CHD3-215ENST00000572750 DZIP1Q86YF9 867 aaKnown RBP19.33■□□□□ 0.68
CHD3-215ENST00000572750 ZAP70P43403 619 aa19.32■□□□□ 0.68
CHD3-215ENST00000572750 HDLBPQ00341 1268 aaKnown RBP19.32■□□□□ 0.68
CHD3-215ENST00000572750 ZNF408Q9H9D4 720 aa19.32■□□□□ 0.68
CHD3-215ENST00000572750 VEZTQ9HBM0 779 aa19.32■□□□□ 0.68
CHD3-215ENST00000572750 MYO1BO43795 1136 aa19.31■□□□□ 0.68
CHD3-215ENST00000572750 CYP2E1P05181 493 aaPredicted RBP19.31■□□□□ 0.68
CHD3-215ENST00000572750 APOBEC3FQ8IUX4 373 aaKnown RBP19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms