RNA–Protein interactions for RNA: ENST00000572525.5

CHMP6-203, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-203ENST00000572525 NEUROD2Q15784 382 aa13.01□□□□□ -0.33
CHMP6-203ENST00000572525 CCDC30Q5VVM6 783 aa13.01□□□□□ -0.33
CHMP6-203ENST00000572525 C17orf99Q6UX52 265 aa13.01□□□□□ -0.33
CHMP6-203ENST00000572525 ERO1BQ86YB8 467 aa13.01□□□□□ -0.33
CHMP6-203ENST00000572525 JARID2Q92833 1246 aaPredicted RBP13.01□□□□□ -0.33
CHMP6-203ENST00000572525 MAP3K2Q9Y2U5 619 aa13.01□□□□□ -0.33
CHMP6-203ENST00000572525 PCDHAC2Q9Y5I4 1007 aa13.01□□□□□ -0.33
CHMP6-203ENST00000572525 MYH13Q9UKX3 1938 aa13.01□□□□□ -0.33
CHMP6-203ENST00000572525 RPAP1Q9BWH6 1393 aaPredicted RBP13□□□□□ -0.33
CHMP6-203ENST00000572525 AOX1Q06278 1338 aa13□□□□□ -0.33
CHMP6-203ENST00000572525 GNAI1P63096 354 aa13□□□□□ -0.33
CHMP6-203ENST00000572525 CALD1Q05682 793 aaKnown RBP13□□□□□ -0.33
CHMP6-203ENST00000572525 SNAPC2Q13487 334 aa13□□□□□ -0.33
CHMP6-203ENST00000572525 MTFR1Q15390 333 aa13□□□□□ -0.33
CHMP6-203ENST00000572525 ARHGAP39Q9C0H5 1083 aa13□□□□□ -0.33
CHMP6-203ENST00000572525 ZNF70Q9UC06 446 aaPredicted RBP13□□□□□ -0.33
CHMP6-203ENST00000572525 ADGRA2Q96PE1 1338 aa12.99□□□□□ -0.33
CHMP6-203ENST00000572525 PI4KAP2A4QPH2 592 aa12.99□□□□□ -0.33
CHMP6-203ENST00000572525 BTBD19C9JJ37 291 aa12.99□□□□□ -0.33
CHMP6-203ENST00000572525 BMP8BP34820 402 aa12.99□□□□□ -0.33
CHMP6-203ENST00000572525 UBXN2AP68543 259 aa12.99□□□□□ -0.33
CHMP6-203ENST00000572525 PPIL2Q13356 520 aa12.99□□□□□ -0.33
CHMP6-203ENST00000572525 PI4KAP1Q8N8J0 262 aa12.99□□□□□ -0.33
CHMP6-203ENST00000572525 CNKSR2Q8WXI2 1034 aa12.99□□□□□ -0.33
CHMP6-203ENST00000572525 HOOK2Q96ED9 719 aa12.99□□□□□ -0.33
CHMP6-203ENST00000572525 TRIM47Q96LD4 638 aa12.99□□□□□ -0.33
CHMP6-203ENST00000572525 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.99□□□□□ -0.33
CHMP6-203ENST00000572525 RIPOR2Q9Y4F9 1068 aa12.99□□□□□ -0.33
CHMP6-203ENST00000572525 FARP2O94887 1054 aaPredicted RBP12.98□□□□□ -0.33
CHMP6-203ENST00000572525 CCL5P13501 91 aa12.98□□□□□ -0.33
CHMP6-203ENST00000572525 CASP7P55210 303 aa12.98□□□□□ -0.33
CHMP6-203ENST00000572525 UBE3BQ7Z3V4 1068 aa12.98□□□□□ -0.33
CHMP6-203ENST00000572525 SNCAIPQ9Y6H5 919 aa12.98□□□□□ -0.33
CHMP6-203ENST00000572525 F8W031 263 aaPredicted RBP12.97□□□□□ -0.33
CHMP6-203ENST00000572525 SOX1O00570 391 aaPredicted RBP12.97□□□□□ -0.33
CHMP6-203ENST00000572525 MYCP01106 439 aaPredicted RBP12.97□□□□□ -0.33
CHMP6-203ENST00000572525 OSBPP22059 807 aa12.97□□□□□ -0.33
CHMP6-203ENST00000572525 PSMC4P43686 418 aa12.97□□□□□ -0.33
CHMP6-203ENST00000572525 RBM5P52756 815 aaKnown RBP eCLIP12.97□□□□□ -0.33
CHMP6-203ENST00000572525 HDLBPQ00341 1268 aaKnown RBP12.97□□□□□ -0.33
CHMP6-203ENST00000572525 FKBP1CQ5VVH2 108 aa12.97□□□□□ -0.33
CHMP6-203ENST00000572525 ANKRD23Q86SG2 305 aa12.97□□□□□ -0.33
CHMP6-203ENST00000572525 DZIP1LQ8IYY4 767 aaKnown RBP12.97□□□□□ -0.33
CHMP6-203ENST00000572525 SLAIN1Q8ND83 568 aa12.97□□□□□ -0.33
CHMP6-203ENST00000572525 RAET1EQ8TD07 263 aa12.97□□□□□ -0.33
CHMP6-203ENST00000572525 U2AF1L4Q8WU68 220 aaKnown RBP12.97□□□□□ -0.33
CHMP6-203ENST00000572525 STXBP5LQ9Y2K9 1186 aa12.97□□□□□ -0.33
CHMP6-203ENST00000572525 MYPNQ86TC9 1320 aa12.96□□□□□ -0.33
CHMP6-203ENST00000572525 ANKRD18BA2A2Z9 1011 aa12.96□□□□□ -0.33
CHMP6-203ENST00000572525 IRF6O14896 467 aa12.96□□□□□ -0.33
CHMP6-203ENST00000572525 SGPL1O95470 568 aa12.96□□□□□ -0.33
CHMP6-203ENST00000572525 CTGFP29279 349 aa12.96□□□□□ -0.33
CHMP6-203ENST00000572525 PPATQ06203 517 aa12.96□□□□□ -0.33
CHMP6-203ENST00000572525 GCKRQ14397 625 aa12.96□□□□□ -0.33
CHMP6-203ENST00000572525 CWF19L2Q2TBE0 894 aaKnown RBP12.96□□□□□ -0.33
CHMP6-203ENST00000572525 FAM83AQ86UY5 434 aa12.96□□□□□ -0.33
CHMP6-203ENST00000572525 CCDC146Q8IYE0 955 aa12.96□□□□□ -0.33
CHMP6-203ENST00000572525 RNF208Q9H0X6 261 aa12.96□□□□□ -0.33
CHMP6-203ENST00000572525 TDRD3Q9H7E2 651 aaKnown RBP12.96□□□□□ -0.33
CHMP6-203ENST00000572525 DNAH12Q6ZR08 3092 aa12.95□□□□□ -0.34
CHMP6-203ENST00000572525 TTC28Q96AY4 2481 aa12.95□□□□□ -0.34
CHMP6-203ENST00000572525 EVI5O60447 810 aa12.95□□□□□ -0.34
CHMP6-203ENST00000572525 MFSD14BQ5SR56 506 aa12.95□□□□□ -0.34
CHMP6-203ENST00000572525 TDRD7Q8NHU6 1098 aaKnown RBP12.95□□□□□ -0.34
CHMP6-203ENST00000572525 LRCH3Q96II8 777 aa12.95□□□□□ -0.34
CHMP6-203ENST00000572525 GDF15Q99988 308 aa12.95□□□□□ -0.34
CHMP6-203ENST00000572525 TMEM39BQ9GZU3 492 aa12.95□□□□□ -0.34
CHMP6-203ENST00000572525 MYH16Q9H6N6 1097 aa12.95□□□□□ -0.34
CHMP6-203ENST00000572525 TTF2Q9UNY4 1162 aaKnown RBP12.95□□□□□ -0.34
CHMP6-203ENST00000572525 KCNH4Q9UQ05 1017 aa12.95□□□□□ -0.34
CHMP6-203ENST00000572525 DOCK2Q92608 1830 aa12.95□□□□□ -0.34
CHMP6-203ENST00000572525 VCANP13611 3396 aa12.94□□□□□ -0.34
CHMP6-203ENST00000572525 LRIT3Q3SXY7 679 aa12.94□□□□□ -0.34
CHMP6-203ENST00000572525 DCAF15Q66K64 600 aa12.94□□□□□ -0.34
CHMP6-203ENST00000572525 CDAN1Q8IWY9 1227 aa12.94□□□□□ -0.34
CHMP6-203ENST00000572525 C8orf58Q8NAV2 365 aa12.94□□□□□ -0.34
CHMP6-203ENST00000572525 PXYLP1Q8TE99 480 aa12.94□□□□□ -0.34
CHMP6-203ENST00000572525 MRIQ9BWK5 157 aa12.94□□□□□ -0.34
CHMP6-203ENST00000572525 PHIPQ8WWQ0 1821 aa12.94□□□□□ -0.34
CHMP6-203ENST00000572525 PRUNE2Q8WUY3 3088 aa12.94□□□□□ -0.34
CHMP6-203ENST00000572525 MYBBP1AQ9BQG0 1328 aaKnown RBP12.93□□□□□ -0.34
CHMP6-203ENST00000572525 TAF5LO75529 589 aa12.93□□□□□ -0.34
CHMP6-203ENST00000572525 FMNL1O95466 1100 aaPredicted RBP12.93□□□□□ -0.34
CHMP6-203ENST00000572525 BCRP11274 1271 aa12.93□□□□□ -0.34
CHMP6-203ENST00000572525 CRKP46108 304 aa12.93□□□□□ -0.34
CHMP6-203ENST00000572525 IFIT5Q13325 482 aaKnown RBP12.93□□□□□ -0.34
CHMP6-203ENST00000572525 IRF5Q13568 498 aa12.93□□□□□ -0.34
CHMP6-203ENST00000572525 UBE4AQ14139 1066 aa12.93□□□□□ -0.34
CHMP6-203ENST00000572525 WDR43Q15061 677 aaKnown RBP eCLIP12.93□□□□□ -0.34
CHMP6-203ENST00000572525 WRNIP1Q96S55 665 aa12.93□□□□□ -0.34
CHMP6-203ENST00000572525 STK31Q9BXU1 1019 aa12.93□□□□□ -0.34
CHMP6-203ENST00000572525 CRISPLD2Q9H0B8 497 aa12.93□□□□□ -0.34
CHMP6-203ENST00000572525 TCP10L2B9ZVM9 353 aa12.92□□□□□ -0.34
CHMP6-203ENST00000572525 SNAP23O00161 211 aa12.92□□□□□ -0.34
CHMP6-203ENST00000572525 ELL2O00472 640 aaPredicted RBP12.92□□□□□ -0.34
CHMP6-203ENST00000572525 FCGRTP55899 365 aa12.92□□□□□ -0.34
CHMP6-203ENST00000572525 DDX60LQ5H9U9 1706 aaKnown RBP12.92□□□□□ -0.34
CHMP6-203ENST00000572525 ANKLE1Q8NAG6 615 aa12.92□□□□□ -0.34
CHMP6-203ENST00000572525 LINS1Q8NG48 757 aa12.92□□□□□ -0.34
CHMP6-203ENST00000572525 PARK7Q99497 189 aaKnown RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms