RNA–Protein interactions for RNA: ENST00000572355.5

HCFC1R1-203, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 3 BASIC

Gene HCFC1R1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-203ENST00000572355 SUCLG2Q96I99 432 aa20.31■□□□□ 0.84
HCFC1R1-203ENST00000572355 TMEM39BQ9GZU3 492 aa20.31■□□□□ 0.84
HCFC1R1-203ENST00000572355 SPINK5Q9NQ38 1064 aaPredicted RBP20.31■□□□□ 0.84
HCFC1R1-203ENST00000572355 IQSEC3Q9UPP2 1182 aaPredicted RBP20.31■□□□□ 0.84
HCFC1R1-203ENST00000572355 TESPA1A2RU30 521 aaPredicted RBP20.3■□□□□ 0.84
HCFC1R1-203ENST00000572355 ALDH1L1O75891 902 aa20.3■□□□□ 0.84
HCFC1R1-203ENST00000572355 CAP1Q01518 475 aa20.3■□□□□ 0.84
HCFC1R1-203ENST00000572355 GCC1Q96CN9 775 aa20.3■□□□□ 0.84
HCFC1R1-203ENST00000572355 FAM84BQ96KN1 310 aaPredicted RBP20.3■□□□□ 0.84
HCFC1R1-203ENST00000572355 TEPSINQ96N21 525 aa20.3■□□□□ 0.84
HCFC1R1-203ENST00000572355 SRCIN1Q9C0H9 1055 aa20.3■□□□□ 0.84
HCFC1R1-203ENST00000572355 CENPFP49454 3210 aa20.29■□□□□ 0.84
HCFC1R1-203ENST00000572355 CCL15-CCL14A0A0B4J2E2 113 aa20.29■□□□□ 0.84
HCFC1R1-203ENST00000572355 TNNI2P48788 182 aa20.29■□□□□ 0.84
HCFC1R1-203ENST00000572355 CHAF1AQ13111 956 aaPredicted RBP20.29■□□□□ 0.84
HCFC1R1-203ENST00000572355 VGLL4Q14135 290 aa20.29■□□□□ 0.84
HCFC1R1-203ENST00000572355 TAF1CQ15572 869 aaPredicted RBP20.29■□□□□ 0.84
HCFC1R1-203ENST00000572355 CCL15Q16663 113 aa20.29■□□□□ 0.84
HCFC1R1-203ENST00000572355 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.29■□□□□ 0.84
HCFC1R1-203ENST00000572355 VPS37DQ86XT2 251 aa20.29■□□□□ 0.84
HCFC1R1-203ENST00000572355 MS4A4AQ96JQ5 239 aa20.29■□□□□ 0.84
HCFC1R1-203ENST00000572355 GRIK5Q16478 980 aa20.28■□□□□ 0.84
HCFC1R1-203ENST00000572355 BRI3BPQ8WY22 251 aa20.28■□□□□ 0.84
HCFC1R1-203ENST00000572355 ARMC5Q96C12 935 aa20.28■□□□□ 0.84
HCFC1R1-203ENST00000572355 OTUD5Q96G74 571 aa20.28■□□□□ 0.84
HCFC1R1-203ENST00000572355 CSADQ9Y600 493 aa20.28■□□□□ 0.84
HCFC1R1-203ENST00000572355 MKI67P46013 3256 aaKnown RBP20.28■□□□□ 0.84
HCFC1R1-203ENST00000572355 ZSWIM8A7E2V4 1837 aa20.27■□□□□ 0.84
HCFC1R1-203ENST00000572355 CACNB3P54284 484 aa20.27■□□□□ 0.84
HCFC1R1-203ENST00000572355 MROH5Q6ZUA9 1318 aa20.27■□□□□ 0.83
HCFC1R1-203ENST00000572355 FRAT2O75474 233 aaPredicted RBP20.26■□□□□ 0.83
HCFC1R1-203ENST00000572355 NBPF7P0C2Y1 421 aaPredicted RBP20.26■□□□□ 0.83
HCFC1R1-203ENST00000572355 EN2P19622 333 aaPredicted RBP20.26■□□□□ 0.83
HCFC1R1-203ENST00000572355 GTF2A2P52657 109 aa20.26■□□□□ 0.83
HCFC1R1-203ENST00000572355 MAP3K9P80192 1104 aa20.26■□□□□ 0.83
HCFC1R1-203ENST00000572355 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.26■□□□□ 0.833e-9■■■□□ 16.8
HCFC1R1-203ENST00000572355 KAZALD1Q96I82 304 aa20.26■□□□□ 0.83
HCFC1R1-203ENST00000572355 BICC1Q9H694 974 aaKnown RBP20.26■□□□□ 0.83
HCFC1R1-203ENST00000572355 ZFYVE28Q9HCC9 887 aa20.26■□□□□ 0.83
HCFC1R1-203ENST00000572355 RIPOR2Q9Y4F9 1068 aa20.26■□□□□ 0.83
HCFC1R1-203ENST00000572355 MYH13Q9UKX3 1938 aa20.25■□□□□ 0.83
HCFC1R1-203ENST00000572355 METTL24Q5JXM2 366 aa20.25■□□□□ 0.83
HCFC1R1-203ENST00000572355 FAM43AQ8N2R8 423 aa20.25■□□□□ 0.83
HCFC1R1-203ENST00000572355 PTCH2Q9Y6C5 1203 aa20.25■□□□□ 0.83
HCFC1R1-203ENST00000572355 SLC9C1Q4G0N8 1177 aa20.24■□□□□ 0.83
HCFC1R1-203ENST00000572355 LRRC24Q50LG9 513 aa20.24■□□□□ 0.83
HCFC1R1-203ENST00000572355 FBXO33Q7Z6M2 555 aa20.24■□□□□ 0.83
HCFC1R1-203ENST00000572355 TEKT1Q969V4 418 aa20.24■□□□□ 0.83
HCFC1R1-203ENST00000572355 BRCA2P51587 3418 aa20.23■□□□□ 0.83
HCFC1R1-203ENST00000572355 CAVIN4Q5BKX8 364 aa20.23■□□□□ 0.83
HCFC1R1-203ENST00000572355 HABP4Q5JVS0 413 aaKnown RBP20.23■□□□□ 0.83
HCFC1R1-203ENST00000572355 TBC1D22AQ8WUA7 517 aa20.23■□□□□ 0.83
HCFC1R1-203ENST00000572355 ZNF333Q96JL9 665 aa20.23■□□□□ 0.83
HCFC1R1-203ENST00000572355 TMEM106CQ9BVX2 250 aa20.23■□□□□ 0.83
HCFC1R1-203ENST00000572355 TMOD2Q9NZR1 351 aa20.23■□□□□ 0.83
HCFC1R1-203ENST00000572355 SPDYE5A6NIY4 337 aa20.22■□□□□ 0.83
HCFC1R1-203ENST00000572355 ANP32CO43423 234 aa20.22■□□□□ 0.83
HCFC1R1-203ENST00000572355 MYCP01106 439 aaPredicted RBP20.22■□□□□ 0.83
HCFC1R1-203ENST00000572355 ARHGEF6Q15052 776 aa20.22■□□□□ 0.83
HCFC1R1-203ENST00000572355 WRNIP1Q96S55 665 aa20.22■□□□□ 0.83
HCFC1R1-203ENST00000572355 SNCAIPQ9Y6H5 919 aa20.22■□□□□ 0.83
HCFC1R1-203ENST00000572355 KIAA0100Q14667 2235 aaKnown RBP20.22■□□□□ 0.83
HCFC1R1-203ENST00000572355 HDLBPQ00341 1268 aaKnown RBP20.21■□□□□ 0.83
HCFC1R1-203ENST00000572355 RABL6Q3YEC7 729 aaPredicted RBP20.21■□□□□ 0.83
HCFC1R1-203ENST00000572355 ANKRD44Q8N8A2 993 aa20.21■□□□□ 0.83
HCFC1R1-203ENST00000572355 UTYO14607 1347 aa20.21■□□□□ 0.83
HCFC1R1-203ENST00000572355 WDHD1O75717 1129 aaPredicted RBP20.2■□□□□ 0.82
HCFC1R1-203ENST00000572355 BCAMP50895 628 aa20.2■□□□□ 0.82
HCFC1R1-203ENST00000572355 SLC4A8Q2Y0W8 1093 aa20.2■□□□□ 0.82
HCFC1R1-203ENST00000572355 NBPF11Q86T75 865 aa20.2■□□□□ 0.82
HCFC1R1-203ENST00000572355 VGLL2Q8N8G2 317 aa20.2■□□□□ 0.82
HCFC1R1-203ENST00000572355 KLHDC4Q8TBB5 520 aa20.2■□□□□ 0.82
HCFC1R1-203ENST00000572355 ZKSCAN4Q969J2 545 aaPredicted RBP20.2■□□□□ 0.82
HCFC1R1-203ENST00000572355 ARHGAP39Q9C0H5 1083 aa20.2■□□□□ 0.82
HCFC1R1-203ENST00000572355 ECM2O94769 699 aaPredicted RBP20.19■□□□□ 0.82
HCFC1R1-203ENST00000572355 PDE8BO95263 885 aa20.19■□□□□ 0.82
HCFC1R1-203ENST00000572355 CETPP11597 493 aa20.19■□□□□ 0.82
HCFC1R1-203ENST00000572355 ERO1BQ86YB8 467 aa20.19■□□□□ 0.82
HCFC1R1-203ENST00000572355 FAM9BQ8IZU0 186 aa20.19■□□□□ 0.82
HCFC1R1-203ENST00000572355 ZDHHC15Q96MV8 337 aa20.19■□□□□ 0.82
HCFC1R1-203ENST00000572355 MAST3O60307 1309 aa20.19■□□□□ 0.82
HCFC1R1-203ENST00000572355 BTBD19C9JJ37 291 aa20.18■□□□□ 0.82
HCFC1R1-203ENST00000572355 SNAPC2Q13487 334 aa20.18■□□□□ 0.82
HCFC1R1-203ENST00000572355 KIF22Q14807 665 aa20.18■□□□□ 0.82
HCFC1R1-203ENST00000572355 FAM83AQ86UY5 434 aa20.18■□□□□ 0.82
HCFC1R1-203ENST00000572355 IRF6O14896 467 aa20.17■□□□□ 0.82
HCFC1R1-203ENST00000572355 TLR2O60603 784 aa20.17■□□□□ 0.82
HCFC1R1-203ENST00000572355 DCAF15Q66K64 600 aa20.17■□□□□ 0.82
HCFC1R1-203ENST00000572355 APOBEC3HQ6NTF7 200 aaKnown RBP20.17■□□□□ 0.82
HCFC1R1-203ENST00000572355 SH3TC2Q8TF17 1288 aa20.17■□□□□ 0.82
HCFC1R1-203ENST00000572355 HOOK2Q96ED9 719 aa20.17■□□□□ 0.82
HCFC1R1-203ENST00000572355 RPAP1Q9BWH6 1393 aaPredicted RBP20.17■□□□□ 0.82
HCFC1R1-203ENST00000572355 AK9Q5TCS8 1911 aa20.16■□□□□ 0.82
HCFC1R1-203ENST00000572355 IFIT1P09914 478 aaKnown RBP20.16■□□□□ 0.82
HCFC1R1-203ENST00000572355 LACTBP83111 547 aaPredicted RBP20.16■□□□□ 0.82
HCFC1R1-203ENST00000572355 PPIL2Q13356 520 aa20.16■□□□□ 0.82
HCFC1R1-203ENST00000572355 PUM3Q15397 648 aaKnown RBP20.16■□□□□ 0.82
HCFC1R1-203ENST00000572355 MIGA2Q7L4E1 593 aa20.15■□□□□ 0.82
HCFC1R1-203ENST00000572355 MRPL50Q8N5N7 158 aaKnown RBP20.15■□□□□ 0.82
HCFC1R1-203ENST00000572355 ZNF341Q9BYN7 854 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 431 ms